mRNA_Ecto-sp13_S_contig7695.18927.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7695.18927.1 vs. uniprot
Match: A0A6H5JIC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIC8_9PHAE) HSP 1 Score: 880 bits (2273), Expect = 4.820e-309 Identity = 592/718 (82.45%), Postives = 606/718 (84.40%), Query Frame = 1
Query: 235 EAGRLQGERGRRCHSSADIHRPDVSALSVEIAVATVQNNERXXXXXXXXXNAAQSEHHVPGGLNGVGTTAAAAAGAGS--RKAPHRRASSLVSRVFGGSVGSSAGRGYRAASLEERHGRDSSSTDRASSTDRRPEGEXXXXXXXXXXXXXXXXXXXXSRHQHVVRRHEPQRSVPSVIDLFRLEPSSFTQPTTPAAALPSPLVAGRTPPAVAASFSAEDLAASLQAFSAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGASRRGRSRGDDAHSSASPRGRISDDGRHQPHQGGDQQQQGVLPPPRPLEVCTAVPVGVTARDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSLARHLREASTNTVDAGREGRIAYGGDATADWGAGRSDGDHLRQREGGDTTS-------LDALEAGGVAHHY-RGSNETMKTMSRSGTPNSRCGTPGSSAGGRSRGGASASVASSYINSLGRGASGDGGGAGGGTMKRPSARLQNEAKHFSDQKRGVTTSYKSEELYKQYHRISFFLVVMGVVIGLGSHGIDEGIELFVHLGEEIMEKGGALLGGSAGANFFFFLLYDVILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLANKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLAGMVSYQLIRRVPFFNDILKKETVLRQV 2358
EAGRL GERGRR HSSADI RPDVSALSVEIAVATVQNNE XXXXXXXXX AAQSEHHVPGGL VGT RKAPHRRASSLVSRVFGGS GSSA RGYRAASL ERHGRDSSSTDRAS XXXXXXXX XXXXXXXXXXX +HQHVVRRHEPQRSVPSV+DLFRLEPSSFTQPTTPAAALPSPLVAGRTPPAVAAS SAE LAAS QAFS Q XXXXXXXXXXXXXXXXXXXXXXATGASR GRS GDDA SSA PRGRISDDG HQPHQ GDQQQQGVLPPPRPLEVCTAVPVGVTARD+ XXXXXXXXXXXXXXXXXXXXXXXX ELSLARHLREASTNTVDAGREGR+AYGG AT DWGAGRSDG HLRQRE T+ +DA EAGGVAHH+ RGS+ETMKTMSRSGTPNSRCGTPGSSAGGRSRGGASASVASSYINSLGRGAS DG GA GGTMKRPSARLQNEAKHFSDQKRGVTTSYKSEELYKQYH+ISFFLVVMGVVIGLGSHGIDEGI++FVHLGE+IMEKGGALLGGS GA FF FLLYD+ILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLA KLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLAGMVSYQLI+RVPFFNDILKKETVLRQV
Sbjct: 37 EAGRLHGERGRRHHSSADIRRPDVSALSVEIAVATVQNNEXXXXXXXXXXXAAQSEHHVPGGLTEVGTXXXXXXXXXXXXRKAPHRRASSLVSRVFGGSAGSSAARGYRAASLGERHGRDSSSTDRASXXXXXXX-XXXXXXXXXLXXXXXXXXXXXXQHQHVVRRHEPQRSVPSVVDLFRLEPSSFTQPTTPAAALPSPLVAGRTPPAVAASLSAEHLAASPQAFSVGQHPQQQTSPAARYAPSTPPPSVYXXXXXXXXXXXXXXXXXXXXXXATGASRIGRSGGDDARSSAPPRGRISDDGWHQPHQDGDQQQQGVLPPPRPLEVCTAVPVGVTARDKEQQQLLYGGAVTYSLRGEIDXXXXXXXXXXXXXXXXXXXXXXXXE--ELSLARHLREASTNTVDAGREGRMAYGGGATGDWGAGRSDGYHLRQRETARNTADIAALGFVDAFEAGGVAHHHHRGSSETMKTMSRSGTPNSRCGTPGSSAGGRSRGGASASVASSYINSLGRGASEDGRGASGGTMKRPSARLQNEAKHFSDQKRGVTTSYKSEELYKQYHKISFFLVVMGVVIGLGSHGIDEGIQIFVHLGEDIMEKGGALLGGSTGAKFFCFLLYDIILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLAKKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLAGMVSYQLIQRVPFFNDILKKETVLRQV 751
BLAST of mRNA_Ecto-sp13_S_contig7695.18927.1 vs. uniprot
Match: D7FQ35_ECTSI (Chloride channel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ35_ECTSI) HSP 1 Score: 779 bits (2012), Expect = 1.170e-263 Identity = 571/712 (80.20%), Postives = 586/712 (82.30%), Query Frame = 1
Query: 229 APEAGRLQGERGRRCHSSADIHRPDVSALSVEIAVATVQNNERXXXXXXXXXNAAQSEHHVPGGL-NGVGTTAAAAAGAGSRKAPHRRASSLVSRVFGGSVGSSAGRGYRAASLEERHGRDSSSTDRASSTDRRPEG-EXXXXXXXXXXXXXXXXXXXXSRHQHVVRRHEPQRSVPSVIDLFRLEPSSFTQPTTPAAALPSPLVAGRTPPAVAASFSAEDLAASLQAFSAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATGASRRGRSRGDDAHSSASPRGRISDDGRHQPHQGGDQQQQGVLPPPRPLEVCTAVPVGVTARDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSLARHLREASTNTVDAGREGRIAYGGDATADWGAGRSDGDHLRQREGGDTTSLDALEAGGVAHHYRGSNETMKTMSRSGTPNSRCGTPGSSAGGRSRGGASASVASSYINSLGRGASGDGGGAGGGTMKRPSARLQNEAKHFSDQKRGVTTSYKSEELYKQYHRISFFLVVMGVVIGLGSHGIDEGIELFVHLGEEIMEKGGALLGGSAGANFFFFLLYDVILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLANKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLAGMVSYQLIRRVPFFNDILKKETVLRQV 2358
APEAGRL GERGRRCHSSAD+HRPDVSALSVEIAVATVQNN+ XXXXXXXX NAAQ+EHHVP GL GVGT A SRKAPHRRASSLVSRVFGGS RASSTD + +G EXXXXXXXXXXXXXXXXXXXX +HQHVVRRHEPQRSVPSV+DLFRLEPSSFTQPTTPAAALPSPLVAGRTPPAVAAS SAEDLAASLQAFS Q XXXXXXXXXXXXXXXXXXXXXXXXXXXXX CTAVP GVTARD+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELS ARHLREASTNTVDAGREGR+AYGG A ADWGAGR DG HLRQREGGDTTSLDALEAGGVA H+RGS+ETMKTMSRSGTP+SRCGTPGSSAGGRSRGGASASVASS+INSLGRGASGDGGGAGGGTMKRPSARLQNEAKH SDQKRGVTTSYKSEELYKQYH+ISFFLVVMGVVIGLGSHGIDEGIELFVHLGEEIMEKGGALLGGS GA FFFFLLYD+ILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLANKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHL GMVSYQLIRRVPFFNDILKKETVLRQV
Sbjct: 35 APEAGRLHGERGRRCHSSADVHRPDVSALSVEIAVATVQNNQXXXXXXXXXHNAAQNEHHVPAGLMTGVGTAAXXXXXXXSRKAPHRRASSLVSRVFGGSXXXXXXXXXXXXXXXXXXXXXXXXXXRASSTDPKHDGDEXXXXXXXXXXXXXXXXXXXXXQHQHVVRRHEPQRSVPSVVDLFRLEPSSFTQPTTPAAALPSPLVAGRTPPAVAASLSAEDLAASLQAFSVGQHQQQQTSPAARYAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAVPGGVTARDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELSFARHLREASTNTVDAGREGRMAYGGGAAADWGAGRPDGYHLRQREGGDTTSLDALEAGGVARHHRGSSETMKTMSRSGTPSSRCGTPGSSAGGRSRGGASASVASSHINSLGRGASGDGGGAGGGTMKRPSARLQNEAKHVSDQKRGVTTSYKSEELYKQYHKISFFLVVMGVVIGLGSHGIDEGIELFVHLGEEIMEKGGALLGGSTGAKFFFFLLYDIILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLANKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLGGMVSYQLIRRVPFFNDILKKETVLRQV 746
BLAST of mRNA_Ecto-sp13_S_contig7695.18927.1 vs. uniprot
Match: A0A225WSG2_9STRA (Chloride Channel (ClC) protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WSG2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.980e-13 Identity = 49/154 (31.82%), Postives = 81/154 (52.60%), Query Frame = 1
Query: 1897 FLVVMGVVIGLGSHGIDEGIELFVHLGEEIMEKGGALLGGSAGANFFFFLLYDVILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLANKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLAGMVSYQLIRRVPFFNDILKKETVLRQV 2358
FL+++G + + + +D G+ + L E LGG+ +FF++L+ V + + T P GSGIP M+ ++ N L L+A K CGLMLA G GL +G+EGP+ HL+ ++++QL+R + +F I E + V
Sbjct: 78 FLLLLGALASVTAWSVDAGVLVVAKLHARFTE-----LGGNWSLGYFFYILFRVFILLLGVGCTVLICPEAAGSGIPEMRSILGGFPFPNYLTGRALIA---KCCGLMLALGSGLTIGKEGPFVHLSSIIAHQLLR-LSWFEQIRTSEDLTHHV 222
BLAST of mRNA_Ecto-sp13_S_contig7695.18927.1 vs. uniprot
Match: A0A1R2C741_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C741_9CILI) HSP 1 Score: 74.3 bits (181), Expect = 5.690e-10 Identity = 44/152 (28.95%), Postives = 84/152 (55.26%), Query Frame = 1
Query: 1900 LVVMGVVIGLGSHGIDEGIELFVHLGEEIMEKGGALLGGSAGANFFFFLLYDVILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLANKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLAGMVSYQLIRRVPFFNDILKKETVLRQ 2355
L+++G++ + S +D I+ +L ++ +L N ++++ ++L +A +T+Y S EGSGIP MK ++ L N + T A ++ G++ A GGGL++GREGP+ H++G+++ I ++P F+ I T+ Q
Sbjct: 72 LILLGLLTAVVSFFMDLAIQELQYLRLFFIQTSSEIL------NMGIWIIFCIVLCELAVFITSYLSKDAEGSGIPEMKAILSGVKLRNFMSYKTFFAKII---GVVFAIGGGLSIGREGPFVHISGIIATH-ISKIPIFSHIHSNLTLKNQ 213
BLAST of mRNA_Ecto-sp13_S_contig7695.18927.1 vs. uniprot
Match: A0A368G521_ANCCA (Chloride transporter, ClC family n=2 Tax=Ancylostoma caninum TaxID=29170 RepID=A0A368G521_ANCCA) HSP 1 Score: 72.4 bits (176), Expect = 9.700e-10 Identity = 46/128 (35.94%), Postives = 72/128 (56.25%), Query Frame = 1
Query: 1906 VMGVVIGLGSHGIDEGIELFVHLGEEIMEKGGALLGGSAGANFFFFLLYDVILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLANKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLAGMVS 2289
++G++ + S G+D IEL H + + L SA FF ++L+ V+ TG++A+ S GSGIP +K +M + N L TL+A +V GL LA GGGL +G+EGP+ H+ +V+
Sbjct: 32 LLGIITAVLSVGMDVAIELLQHAHVVLYDL---FLRTSAYLAFFSWVLHVVVFTGLSAVFCQIVSKQAVGSGIPEVKVIMHGFKMDNYLTFRTLIAKMV---GLTLAMGGGLPIGKEGPFVHMGAIVA 153
BLAST of mRNA_Ecto-sp13_S_contig7695.18927.1 vs. uniprot
Match: A0A016W5T0_9BILA (CBS domain-containing protein n=1 Tax=Ancylostoma ceylanicum TaxID=53326 RepID=A0A016W5T0_9BILA) HSP 1 Score: 73.6 bits (179), Expect = 1.120e-9 Identity = 51/146 (34.93%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 1873 KQYHRISFFLV-------VMGVVIGLGSHGIDEGIELFVHLGEEIMEKGGALLGGSAGANFFFFLLYDVILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLANKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLAGMVS 2289
+Q + FLV ++G++ + S G+D IEL H + E L SA FF ++L+ V+ TG++A+ S GSGIP +K +M + N L TL+A +V GL LA GGGL +G+EGP+ H+ +V+
Sbjct: 41 RQARNVVHFLVEDWCLSALLGIITAVLSVGMDVAIELLQHAHVVLYEL---CLRTSAYLAFFSWVLHVVVFTGLSAVFCQIVSKQAVGSGIPEVKVIMHGFKMDNYLTFRTLIAKMV---GLTLAMGGGLPIGKEGPFVHMGAIVA 180
BLAST of mRNA_Ecto-sp13_S_contig7695.18927.1 vs. uniprot
Match: A0A2R5GP31_9STRA (Chloride channel protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GP31_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.540e-9 Identity = 45/154 (29.22%), Postives = 80/154 (51.95%), Query Frame = 1
Query: 1897 FLVVMGVVIGLGSHGIDEGIELFVHLGEEIMEKGGALLGGSAGANFFFFLLYDVILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLANKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLAGMVSYQLIRRVPFFNDILKKETVLRQV 2358
FL ++G+ + + IDE + L E+ A S+ ++ + L+ +L + TA SP GSGIP M+ M+ + L TL + K GL+LA GGG+ +G+EGP+ H++ +++ Q++R +P F +I + +Q+
Sbjct: 317 FLCILGIASAVLAWCIDEAVALLAQGRTEL-----ANTAQSSVVSYLLWTLFTTMLAVFSVFTTAKISPLAAGSGIPQMRSMLGGFSIPGYLSLATLTS---KVLGLLLALGGGMVIGKEGPFVHISCIIANQMLR-IPIFQEIRSSPALKKQI 461
BLAST of mRNA_Ecto-sp13_S_contig7695.18927.1 vs. uniprot
Match: A0A158P9K4_ANGCA (Uncharacterized protein n=1 Tax=Angiostrongylus cantonensis TaxID=6313 RepID=A0A158P9K4_ANGCA) HSP 1 Score: 72.0 bits (175), Expect = 2.990e-9 Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 1
Query: 1906 VMGVVIGLGSHGIDEGIELFVHLGEEIMEKGGALLGGSAGANFFFFLLYDVILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLANKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLAGMVS 2289
++G++ + S G+D IE+ H + + L S+ FF + Y VILT ++A+ FS GSGIP +K +M L N L TL+A +V GL LA GGGL +G+EGP+ H+ +V+
Sbjct: 54 LLGIITAVLSVGMDVAIEILQHAHVVLHD---VCLETSSYLAFFSWTSYIVILTTLSAVFCQIFSKQAVGSGIPEVKVIMHGFKLENYLTCRTLIAKMV---GLTLAMGGGLPIGKEGPFVHIGAIVA 175
BLAST of mRNA_Ecto-sp13_S_contig7695.18927.1 vs. uniprot
Match: A0A4D9DGK6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DGK6_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.440e-8 Identity = 46/158 (29.11%), Postives = 82/158 (51.90%), Query Frame = 1
Query: 1900 LVVMGVVIGLGSHGIDEGIE-----------LFVHLGEEIMEKGGALLGGSAGANFFFFLLYDVILTGIAAMLTAYFSPGVE--GSGIPAMKYMMD---TDDLANKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLAGMVSYQLIRRVPFFND 2325
LV++G ++ G H ++ GI+ + G ME + + G L + V ++ + + P + GSG+P +KY++ ++ LR+ TLVA KA GLMLAAG GL++GREGP H+A ++S+ L++ + ++++
Sbjct: 5 LVIIGAIVSTGEHFMNLGIDGLWKSRYELLGFLLPAGSTAMESWERVTEANWGLALLVSLAFTVGISLAGVLTCSLLDPTRDSAGSGLPLLKYILSGEVMEEAEEHLRTRTLVA---KALGLMLAAGAGLSIGREGPNVHMAAIISWLLMKSIGWYHE 159
BLAST of mRNA_Ecto-sp13_S_contig7695.18927.1 vs. uniprot
Match: A0A4U8UJW3_STECR (Uncharacterized protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U8UJW3_STECR) HSP 1 Score: 68.6 bits (166), Expect = 1.790e-8 Identity = 45/129 (34.88%), Postives = 70/129 (54.26%), Query Frame = 1
Query: 1903 VVMGVVIGLGSHGIDEGIELFVHLGEEIMEKGGALLGGSAGANFFFFLLYDVILTGIAAMLTAYFSPGVEGSGIPAMKYMMDTDDLANKLRSFTLVAVVVKACGLMLAAGGGLNVGREGPYTHLAGMVS 2289
+++GV+ + S G+D IE+ HL + +K + S F + L+ V G+AA+ S GSGIP +K +M + N L TL+A +V GL LA GGGL +G+EGP+ H+ +V+
Sbjct: 66 IMLGVITAVLSVGMDVLIEILQHLHVSLYDK---FIQISTYLAFGMWTLHVVAFVGLAAIFCQIVSKQAVGSGIPEVKVIMHGFKMKNYLTFRTLIAKMV---GLTLAMGGGLPIGKEGPFVHMGAIVA 188 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7695.18927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7695.18927.1 >prot_Ecto-sp13_S_contig7695.18927.1 ID=prot_Ecto-sp13_S_contig7695.18927.1|Name=mRNA_Ecto-sp13_S_contig7695.18927.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=786bp DDGCRVVAFAPRLHSKHKLAAREPRRQGGCASVPTTVSTVWVMRHQEKQQback to top mRNA from alignment at Ecto-sp13_S_contig7695:907..7239+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7695.18927.1 ID=mRNA_Ecto-sp13_S_contig7695.18927.1|Name=mRNA_Ecto-sp13_S_contig7695.18927.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6333bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7695:907..7239+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7695:907..7239+ >mRNA_Ecto-sp13_S_contig7695.18927.1 ID=mRNA_Ecto-sp13_S_contig7695.18927.1|Name=mRNA_Ecto-sp13_S_contig7695.18927.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2358bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7695:907..7239+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |