prot_Ecto-sp13_S_contig769.18921.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig769.18921.1
Unique Nameprot_Ecto-sp13_S_contig769.18921.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length247
Homology
BLAST of mRNA_Ecto-sp13_S_contig769.18921.1 vs. uniprot
Match: A0A6H5JIF9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIF9_9PHAE)

HSP 1 Score: 436 bits (1122), Expect = 7.810e-154
Identity = 222/249 (89.16%), Postives = 227/249 (91.16%), Query Frame = 0
Query:    1 MGSSWDAERGAKAAVWFSFYVLCWLLMQVSCKLELPGNCRRAYEPLDVLTELPFLLAFALGQA---FLCDILDSERFHSLSKQWYLPVVVVGSGITTSALMKNDGFVDTHESEDGMTTAVNVVSTLLVIVVGLAFVYHFFVAWKTLPGAVMISGGVAAPEDATAPVRSGNRFTQYMATTVLVAAFVALYAAFAHRRGDNWNYHYILLAWVMSLIASFDDPFSVVWLGVTTGAFLQGVGAYSFQFLFRSD 246
            M SSWDAERGAKAAVWFSFYVLCWLLMQVSC+LE PGN R A +PLDVLTELPFLLAFALGQA   FLCD LDSERFHSLSK+ YLPVVVVGSGITTSAL KNDGFVDTHE EDGMTTAVNVVSTLLVI VGLAFVYHFFVAW TLPGAVMISGGV+ PEDATAPVRSGNRF +YMAT VLVAAFVAL AAF HRRGDNWNYHY LLAWVMSLIA FDDPFSVVWLGVTTGAFLQGVGAYSFQFLFR D
Sbjct:    1 MSSSWDAERGAKAAVWFSFYVLCWLLMQVSCELEPPGNYRWACQPLDVLTELPFLLAFALGQATTAFLCDTLDSERFHSLSKERYLPVVVVGSGITTSALTKNDGFVDTHEIEDGMTTAVNVVSTLLVIAVGLAFVYHFFVAWTTLPGAVMISGGVSTPEDATAPVRSGNRFARYMATAVLVAAFVALNAAFVHRRGDNWNYHYTLLAWVMSLIAIFDDPFSVVWLGVTTGAFLQGVGAYSFQFLFRFD 249          
BLAST of mRNA_Ecto-sp13_S_contig769.18921.1 vs. uniprot
Match: A0A6H5JMR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR1_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 5.430e-86
Identity = 130/250 (52.00%), Postives = 174/250 (69.60%), Query Frame = 0
Query:    1 MGSSWDAERGAKAAVWFSFYVLCWLLMQVSCKLELPGNCRRAYEPLDVLTELPFLLAFALGQAFLCDILDSERFHSLSKQWYLPVVVVGSGITTSALMKNDGFVDTHESEDGMTTAVNVVSTLLVIVVGLAFVYHFFVAWKTLPGAV----MISGGVAAPEDATAPVRSGNRFTQYMATTVLVAAFVALYAAFAHRRGDNWNYHYILLAWVMSLIASFDDPFSVVWLGVTTGAFLQGVGAYSFQFLFRSD 246
            M   WDAE+G KAA W  FY+  + LM  SC++ +P NC RA + +DVLTELPFL  FA   AF+C IL+  R+H+LSK+ Y PV+V+ SG+ TSALM NDGF   H+    ++ A   +S +L+I+V L F YH+F+AWK LPG      M+SG VA P     P R+ NR+ QYMA+  ++  ++ L++AFA+ RGD W+YHY+LLAW+MSLIA+FDD  SV WLG+TTG FLQGVGAYSF+ L + +
Sbjct:   35 MALVWDAEQGVKAASWVGFYIFLYALMAASCEVGVPENCTRATDAMDVLTELPFLFVFA---AFMCGILNGTRYHALSKKMYFPVLVIASGLATSALMNNDGFEGLHDPGGDLSPAEAALSIILLILVALVFAYHYFLAWKFLPGGWLGWGMVSGQVAEPPP---PSRAENRYLQYMASITVIMLYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFRVLMQGN 278          
BLAST of mRNA_Ecto-sp13_S_contig769.18921.1 vs. uniprot
Match: D7G1N8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N8_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 3.020e-45
Identity = 77/151 (50.99%), Postives = 105/151 (69.54%), Query Frame = 0
Query:   98 MKNDGFVDTHESEDGMTTAVNVVSTLLVIVVGLAFVYHFFVAWKTLPGAV----MISGGVAAPEDATAPVRSGNRFTQYMATTVLVAAFVALYAAFAHRRGDNWNYHYILLAWVMSLIASFDDPFSVVWLGVTTGAFLQGVGAYSFQFLFR 244
            M NDGF   H+    ++ A   +S +L+++V L F YH+F+AWK LPG      M+SG VA P     P R+ NR+ QYMA+  ++  ++ L++AFA+ RGD W+YHY+LLAW+MSLIA+FDD  SV WLG+TTG FLQGVGAYSF+ L +
Sbjct:    1 MNNDGFEGLHDPGGELSPAEAALSIILLVLVALVFAYHYFLAWKFLPGGWLGWGMVSGQVAEPPP---PSRAENRYLQYMASITVIMVYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFRVLLQ 148          
BLAST of mRNA_Ecto-sp13_S_contig769.18921.1 vs. uniprot
Match: A0A7J6NSF0_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NSF0_PEROL)

HSP 1 Score: 61.2 bits (147), Expect = 3.840e-7
Identity = 62/237 (26.16%), Postives = 99/237 (41.77%), Query Frame = 0
Query:   21 VLCWLLMQVS--------C-KLELPGNCRRAYEPLDVLTELPFLLAFALGQAFLCDILD----SERFHSLSKQWYLPVVVVGSGITTSALMKNDGFVDTHESEDGMTTAVNVVSTLLVIVVGLAFV---YHFFVAWKTLPGAVMISGGVAAPEDATAPVRSGNRFTQYMATTVLVAAFVALYAAFAHRRGDN---WNYHYILLAWVMSLIASFDDPFSVVWLGVTTGAFLQGVGAYS 238
            VL WLL+ V+        C K  +P +  R Y  L   T L  L  F + QA+  +++D    S+   S  + W+       S + T   M  D       S  G     N  ST+L            +H + + K LP               T P  +    +++         F+ ++    H   DN   ++ H+  +AW++SLIA+FD P S++ L +T+G F+QG+ AYS
Sbjct:  426 VLRWLLLLVAGYAYNRFFCEKYNIPRDSDR-YTYLGHSTNLANLAMFGIIQAWFVEVIDDPKRSKWIFSFPRWWFFITFFAASTVFTLLGML-DALSHNSISPSGHLDRWNAFSTVLTXXXXXXXXXXXWHVWYSIKVLP---------------TYPDAAVYILSRFGVVCTFGVTFLLIHFDDEHNHDDNPVTFHLHHYFIAWLLSLIAAFDHPISLIMLAITSGIFVQGIAAYS 645          
BLAST of mRNA_Ecto-sp13_S_contig769.18921.1 vs. uniprot
Match: C5L8A4_PERM5 (Uncharacterized protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L8A4_PERM5)

HSP 1 Score: 57.8 bits (138), Expect = 3.810e-6
Identity = 56/205 (27.32%), Postives = 91/205 (44.39%), Query Frame = 0
Query:   55 LLAFALGQAFLCDILD----SERFHSLSKQWYLPVVVVGSGITTSALMKNDGFVDTHESEDGMT---TAVNVVSTLLVIVVGLAFVYHFFVAWKTLPGAVMISGGVAAPEDATAPVRSGNRFTQYMATTVLVAAFVALYAAFAHRRGDN---WNYHYILLAWVMSLIASFDDPFSVVWLGVTTGAFLQGVGAYSFQFLF---RSD 246
            L  F + QA+  +++D    S+   SL + W+       S + T   M  D    +  S  G      A ++V T L   + L  ++H   + K LP             DA   + S          T L+  +   Y    ++  DN   ++ H+  +AW++SLIA+FD P S++ L +T+G F+QG+ AYS   +F   RSD
Sbjct:  134 LAMFGIIQAWFVEVIDDPKRSKWIFSLRRWWFFITFFAASTVFTLLGML-DVLSHSSISPSGHLDNWNAFSIVLTFLASFLALLIIWHVVYSIKVLP----------TYADAAVYIISRVGVVCIFGITFLLIHYDDKY----NKHDDNPVTFHLHHYFIAWLLSLIAAFDHPISLLMLSITSGIFVQGIAAYSAAGIFFRPRSD 323          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig769.18921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JIF9_9PHAE7.810e-15489.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JMR1_9PHAE5.430e-8652.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1N8_ECTSI3.020e-4550.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7J6NSF0_PEROL3.840e-726.16Uncharacterized protein n=1 Tax=Perkinsus olseni T... [more]
C5L8A4_PERM53.810e-627.32Uncharacterized protein n=1 Tax=Perkinsus marinus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 215..219
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 244..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 191..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 13..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..190
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..118
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..31
score: 0.506
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 197..214
NoneNo IPR availableTMHMMTMhelixcoord: 219..241
NoneNo IPR availableTMHMMTMhelixcoord: 48..65
NoneNo IPR availableTMHMMTMhelixcoord: 168..190
NoneNo IPR availableTMHMMTMhelixcoord: 80..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig769contigEcto-sp13_S_contig769:14794..17174 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig769.18921.1mRNA_Ecto-sp13_S_contig769.18921.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig769 14401..17897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig769.18921.1 ID=prot_Ecto-sp13_S_contig769.18921.1|Name=mRNA_Ecto-sp13_S_contig769.18921.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=247bp
MGSSWDAERGAKAAVWFSFYVLCWLLMQVSCKLELPGNCRRAYEPLDVLT
ELPFLLAFALGQAFLCDILDSERFHSLSKQWYLPVVVVGSGITTSALMKN
DGFVDTHESEDGMTTAVNVVSTLLVIVVGLAFVYHFFVAWKTLPGAVMIS
GGVAAPEDATAPVRSGNRFTQYMATTVLVAAFVALYAAFAHRRGDNWNYH
YILLAWVMSLIASFDDPFSVVWLGVTTGAFLQGVGAYSFQFLFRSD*
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