prot_Ecto-sp13_S_contig76884.18918.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig76884.18918.1
Unique Nameprot_Ecto-sp13_S_contig76884.18918.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
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BLAST of mRNA_Ecto-sp13_S_contig76884.18918.1 vs. uniprot
Match: A0A6H5JGF3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF3_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 3.130e-42
Identity = 68/78 (87.18%), Postives = 71/78 (91.03%), Query Frame = 0 
Query:    1 VTETPRFGWGLKAERDIELGEKLATIPRCMCIGSTAAVQGEEDVDDNNSIPEEDKSWMGPPELQALVEKVPRAYPDLR 78
            + ETP FGWGLKAERDIELGEKLATIPRCMCIGSTAAVQGEE  DD+N +PEEDKSWMGPPELQALVEKVP  YPDLR
Sbjct:   88 LEETPHFGWGLKAERDIELGEKLATIPRCMCIGSTAAVQGEEGADDSNGVPEEDKSWMGPPELQALVEKVPPTYPDLR 165
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BLAST of mRNA_Ecto-sp13_S_contig76884.18918.1 vs. uniprot
Match: D7FW30_ECTSI (Set domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW30_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.370e-40
Identity = 70/78 (89.74%), Postives = 72/78 (92.31%), Query Frame = 0 
Query:    1 VTETPRFGWGLKAERDIELGEKLATIPRCMCIGSTAAVQGEEDVDDNNSIPEEDKSWMGPPELQALVEKVPRAYPDLR 78
            + ETPRFGWGLKAERDIELGEKLATIPRCMCIGSTAAVQGEE  DDNN + EEDKSWMGPPELQALVEKVPR YPDLR
Sbjct:   88 LEETPRFGWGLKAERDIELGEKLATIPRCMCIGSTAAVQGEEGADDNNGVLEEDKSWMGPPELQALVEKVPRTYPDLR 165
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig76884.18918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGF3_9PHAE3.130e-4287.18Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FW30_ECTSI1.370e-4089.74Set domain protein n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig76884contigEcto-sp13_S_contig76884:99..335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig76884.18918.1mRNA_Ecto-sp13_S_contig76884.18918.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig76884 99..335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig76884.18918.1 ID=prot_Ecto-sp13_S_contig76884.18918.1|Name=mRNA_Ecto-sp13_S_contig76884.18918.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
VTETPRFGWGLKAERDIELGEKLATIPRCMCIGSTAAVQGEEDVDDNNSI
PEEDKSWMGPPELQALVEKVPRAYPDLR*
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