prot_Ecto-sp13_S_contig7688.18917.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7688.18917.1
Unique Nameprot_Ecto-sp13_S_contig7688.18917.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length505
Homology
BLAST of mRNA_Ecto-sp13_S_contig7688.18917.1 vs. uniprot
Match: A0A6H5KD39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD39_9PHAE)

HSP 1 Score: 564 bits (1454), Expect = 7.070e-188
Identity = 405/479 (84.55%), Postives = 422/479 (88.10%), Query Frame = 0
Query:   28 QTTRVLINYDKKDLQQLVSCVERALQKSPSDPPVRVTSLSYAPVDTTGG--GGVLDGTPFCPQPKRQKSSTDARHKYVFLTQKTFNPEVFWAMDKVFLAAVVVREGDEDDGEEVVNDENN-RRLSNGSVATSNTSPAGRGVGTIGNSSVSPSPPXXXXXAHQESLSPSSPPHMDRVSRIGNASKSDGGGEGSGGDSPAPPWAPPGPDNGGSEDLVLSVAGAGALSPAMSTLSSRGSTETERDGERGSGGDSDNGSILDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSPLASPGPGKRSALFRRASRLPPDTERNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVGDGINSEGAGLVRGGGGARPASRGDPVAAHEQRSKQARGSDRHRESYRPAAGQREVGRGRAGTGSSXXXXXXAAVKGDERRRAAVDRPGGDKGLQKKRPVTKTRELYPK 503
            +TTRVLINYDKKDLQQLVSCVERALQKSPSDPP+RVTSLSYAPV+TTGG  GGVLDGTPFCPQPKRQKSSTDARHKYV LTQKTFNPEVFWAM+KVFLAAVVVREGD+             RRLSNGSVATSNTSPAGRGVGTIGNSSVSPSPP     AHQE LSPSSPP +DRVSRIG++S   GGGEGSGGDSPAPPWAPPGPD GGSEDLVLSV GAGALSPAMSTLSSRGSTE ERD +RG+G DSDNGSILDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    DSPLASPGPGK S LFRRASRLPPDTERN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX+V GDG NSEGAGLVRGG GARPASRG+PVA+HEQRSKQARG DR +ES RPAAGQREVG GR GTGSS      AAVKGDE+RRAA+D PG DKGLQKKRPVTKTREL+ K
Sbjct:    9 RTTRVLINYDKKDLQQLVSCVERALQKSPSDPPMRVTSLSYAPVETTGGEGGGVLDGTPFCPQPKRQKSSTDARHKYVLLTQKTFNPEVFWAMEKVFLAAVVVREGDDXXXXXXXXXXXXXRRLSNGSVATSNTSPAGRGVGTIGNSSVSPSPPAPKPPAHQERLSPSSPPQIDRVSRIGDSSTLGGGGEGSGGDSPAPPWAPPGPDIGGSEDLVLSVPGAGALSPAMSTLSSRGSTEMERDEDRGAGRDSDNGSILDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAA-DSPLASPGPGKLSVLFRRASRLPPDTERNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVGGDGTNSEGAGLVRGGRGARPASRGNPVASHEQRSKQARGRDRDKESSRPAAGQREVGSGRPGTGSSSSRSAAAAVKGDEKRRAAMDGPGRDKGLQKKRPVTKTRELHRK 486          
BLAST of mRNA_Ecto-sp13_S_contig7688.18917.1 vs. uniprot
Match: D7FIN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN4_ECTSI)

HSP 1 Score: 513 bits (1321), Expect = 6.600e-163
Identity = 393/508 (77.36%), Postives = 402/508 (79.13%), Query Frame = 0
Query:    1 MSGRAKKVTLNKATFVEIRHTGCKSKRQTTRVLINYDKKDLQQLVSCVERALQKSPSDPPVRVTSLSYAPVDTTGG--GGVLDGTPFCPQPKRQKSSTDARHKYVFLTQKTFNPEVFWAMDKVFLAAVVVREGDEDDGEEVVNDENNR-RLSNGSVATSNTSPAGRGVGTIGNSSVSPSPPXXXXXAHQESLSPSSPPHMDRVSRIGNASKSDGGGEGSGGDSPAPPWAPPGPDNGGSEDLVLSVAGAGALSPAMSTLSSRGSTETERDGERGSGGDSDNGSILDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSPLASPGPGKRSALFRRASRLPPDTERNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVGDGINSEGAGLVRGGGGARPASRGDPVAAHEQRSKQARGSDRHRESYRPAAGQREVGRGRAGTGSSXXXXXXAAVKGDERRRAAVDRPGGDKGLQKKRPVTKTRELYPKPG 505
            M GRAKKVTLNKATFVEIRH GCK KRQTTRVLINYDKKDLQQLVSCVERALQKSPSDPPVRVTSLSYAPV+TTGG  GGVLDGTPFCPQPKRQKSSTDARHK V LTQKTFNPEVFW+M+KVFLAAVVVRE                 RLSNGSVATSNTSPAGRGVGTIGNSS      XXXXX                                    SPAPPW PPGP        VLSVAGAG+L+PAMSTLSSRGSTETERDGERG+GGDSDNGSILDS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     DSPLASPGPGKRS LFRRASRLPPDT+RN   XXXXXXXXXXXXXXXXXXXXXXXXXX   SVVG G +SE A LVRGGGG RPASRGDPVAAHEQRSKQ RGSDR +ES R AAGQREVG GR GTGSS      AAVKGDERRRAAVDRP GDKGLQKKRPVTKTRELYPKPG
Sbjct:    1 MPGRAKKVTLNKATFVEIRHKGCKPKRQTTRVLINYDKKDLQQLVSCVERALQKSPSDPPVRVTSLSYAPVETTGGEGGGVLDGTPFCPQPKRQKSSTDARHKNVLLTQKTFNPEVFWSMEKVFLAAVVVREXXXXXXXXXXXXXXXXXRLSNGSVATSNTSPAGRGVGTIGNSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAPPWTPPGP--------VLSVAGAGSLTPAMSTLSSRGSTETERDGERGAGGDSDNGSILDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAT--DSPLASPGPGKRSVLFRRASRLPPDTDRNSGSXXXXXXXXXXXXXXXXXXXXXXXXXXGRGSVVGGGTDSESADLVRGGGGVRPASRGDPVAAHEQRSKQPRGSDRDKESSRSAAGQREVGSGRPGTGSSSSRSAAAAVKGDERRRAAVDRPAGDKGLQKKRPVTKTRELYPKPG 498          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7688.18917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KD39_9PHAE7.070e-18884.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIN4_ECTSI6.600e-16377.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7688contigEcto-sp13_S_contig7688:576..4784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7688.18917.1mRNA_Ecto-sp13_S_contig7688.18917.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7688 576..4979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7688.18917.1 ID=prot_Ecto-sp13_S_contig7688.18917.1|Name=mRNA_Ecto-sp13_S_contig7688.18917.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=505bp
MSGRAKKVTLNKATFVEIRHTGCKSKRQTTRVLINYDKKDLQQLVSCVER
ALQKSPSDPPVRVTSLSYAPVDTTGGGGVLDGTPFCPQPKRQKSSTDARH
KYVFLTQKTFNPEVFWAMDKVFLAAVVVREGDEDDGEEVVNDENNRRLSN
GSVATSNTSPAGRGVGTIGNSSVSPSPPAPQPPAHQESLSPSSPPHMDRV
SRIGNASKSDGGGEGSGGDSPAPPWAPPGPDNGGSEDLVLSVAGAGALSP
AMSTLSSRGSTETERDGERGSGGDSDNGSILDSSSCGGGGGGSIDRGREQ
SSATATSSCASTVPEGGGTDGGGGGSSAAADSPLASPGPGKRSALFRRAS
RLPPDTERNSGSSERGGGGGSSNGDDRTAGAATEEAAAGGGSVVGDGINS
EGAGLVRGGGGARPASRGDPVAAHEQRSKQARGSDRHRESYRPAAGQREV
GRGRAGTGSSSSRSAAAAVKGDERRRAAVDRPGGDKGLQKKRPVTKTREL
YPKPG
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