prot_Ecto-sp13_S_contig7684.18913.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7684.18913.1
Unique Nameprot_Ecto-sp13_S_contig7684.18913.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length102
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7684.18913.1 vs. uniprot
Match: A0A6H5JHA7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA7_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.250e-51
Identity = 90/102 (88.24%), Postives = 96/102 (94.12%), Query Frame = 0 
Query:    1 ATAAHQRRDGGVARRTLRNWIAARLGRSSRSSDDATGAYFLHMLRTDFPEIWAAVAAGTGDTVICVPQSTSLSQEDLTAAEARAHVLTPSEEVPGDFLTLDG 102
            ATAAHQ RDGG+ RR+LR+WIA RLG+S +SS+DATGAYFLHMLRTDFPEIWAAV AGT DTVICVPQSTSLSQEDLTAAEARAHVLTPSEEVPGDFLTLDG
Sbjct:   63 ATAAHQTRDGGMTRRSLRSWIAGRLGQSRKSSNDATGAYFLHMLRTDFPEIWAAVVAGTVDTVICVPQSTSLSQEDLTAAEARAHVLTPSEEVPGDFLTLDG 164
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BLAST of mRNA_Ecto-sp13_S_contig7684.18913.1 vs. uniprot
Match: D7FTN1_ECTSI (Similar to hect domain and RLD 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN1_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 2.840e-29
Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 0 
Query:   43 MLRTDFPEIWAAVAAGTGDTVICVPQSTSLSQEDLTAAEARAHVLTPSEEVPGDFLTLDG 102
            MLR DFPEIWAAV AGTGDTVICVPQSTSLSQEDLTAAEARAHVLTPSEEVPGDFLTLDG
Sbjct:    1 MLRMDFPEIWAAVVAGTGDTVICVPQSTSLSQEDLTAAEARAHVLTPSEEVPGDFLTLDG 60
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7684.18913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHA7_9PHAE1.250e-5188.24Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FTN1_ECTSI2.840e-2996.67Similar to hect domain and RLD 4 n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7684contigEcto-sp13_S_contig7684:816..2460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7684.18913.1mRNA_Ecto-sp13_S_contig7684.18913.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7684 816..2460 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7684.18913.1 ID=prot_Ecto-sp13_S_contig7684.18913.1|Name=mRNA_Ecto-sp13_S_contig7684.18913.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=102bp
ATAAHQRRDGGVARRTLRNWIAARLGRSSRSSDDATGAYFLHMLRTDFPE
IWAAVAAGTGDTVICVPQSTSLSQEDLTAAEARAHVLTPSEEVPGDFLTL
DG
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