mRNA_Ecto-sp13_S_contig7683.18912.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7683.18912.1
Unique NamemRNA_Ecto-sp13_S_contig7683.18912.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7683.18912.1 vs. uniprot
Match: D7G376_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G376_ECTSI)

HSP 1 Score: 860 bits (2222), Expect = 1.060e-310
Identity = 441/466 (94.64%), Postives = 446/466 (95.71%), Query Frame = 1 
Query:    1 QDFNGGPCCLQFNCMVQKGYYPTADDRLRGTFVLSTLQDALTGALILERGNVNSEAVESVWDVATYTGQTETSLRNLAALYKAELSFFAPSCIDHGLLLVGDVELWMCPSGTESFDTVDALCLTDEETGALSGVEFQVTLDDVRLRLAAEISVDAWERIQQVVLFDSCNDINCNPTCMSELIPGTRDESESTLVWTLVLATCAVALLVLGGGLIAVVWGVRWRNRAVGIVTSALLEESRKSRDKQAPSLRCLGCFDALLTSRRWRTRSPSGIDTVPEEKQLLHNMDGDVPKGSLCALMGPSGSG-NTLLDLLTGRKAIGRCSGELMFNGKSIANQKGSYISQSGYMRQLHIPFLEGLSLTSLEESINTKAGGLSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTKVTLVVAIHQPRPELWLLFTHAILLKDGRTVYCGPADEALSSITRW 1395
            +DFNGGPCCLQFNCMVQKGYYPTADDRLRGTFVLSTLQDALTGALILERGNVNSEAVESVWDVA Y GQTETSLRNLAALYKAELSFFAPSCIDHGLLLVGDVELWMCPSGTESFD VDALCLTDEETGALSGVEFQVTLDDVRLRLAAEISVDAWERIQ V LFDSCNDINCNPTCMSELIPGTRDESESTLVWTLVLATCAVALLVLGGGLIAVVWGVRWRNRAVGIVTSALLEESRKSRDKQAPSLR L CFDAL TSRRWRTRSPSGIDTVPEEKQLLHNMDG+VPKGSLCALMGPSGSG +TLLDLLTGRKAIGRCSGELMFNGKSIANQKGSYIS+SGYMR +         LTSLE SINTKAGGLSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTKVTLVVAIHQPRPELWLLFTHAILLKDGRTVYCGPADEALSSITRW
Sbjct:  213 EDFNGGPCCLQFNCMVQKGYYPTADDRLRGTFVLSTLQDALTGALILERGNVNSEAVESVWDVAAYAGQTETSLRNLAALYKAELSFFAPSCIDHGLLLVGDVELWMCPSGTESFDNVDALCLTDEETGALSGVEFQVTLDDVRLRLAAEISVDAWERIQ-VALFDSCNDINCNPTCMSELIPGTRDESESTLVWTLVLATCAVALLVLGGGLIAVVWGVRWRNRAVGIVTSALLEESRKSRDKQAPSLRRLRCFDALPTSRRWRTRSPSGIDTVPEEKQLLHNMDGEVPKGSLCALMGPSGSGKSTLLDLLTGRKAIGRCSGELMFNGKSIANQKGSYISKSGYMRAI--------KLTSLEGSINTKAGGLSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTKVTLVVAIHQPRPELWLLFTHAILLKDGRTVYCGPADEALSSITRW 669
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BLAST of mRNA_Ecto-sp13_S_contig7683.18912.1 vs. uniprot
Match: A0A388LTX5_CHABU (ABC transporter domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LTX5_CHABU)

HSP 1 Score: 126 bits (316), Expect = 3.370e-27
Identity = 116/422 (27.49%), Postives = 192/422 (45.50%), Query Frame = 1 
Query:  253 LSFFAPSCIDHGLLLVG-DVELWMCPSGTESFDTVDAL------CLTDEETGALSGVEFQVTLDDVRLRLAAEISVDAWERIQQVVLFDSCNDINCNPTCMSELIPG--TRDESESTLVWTLVLATCAVALLVLGGGLIAVVWGVRWRNRAVGIVTSALLEESRKSRDKQAPSLRCLGCFDALLTSRRWRTRSPSGIDTVPEEKQLLHNMDGDVPKGSLCALMGPSGSG-NTLLDLLTGRKAIGRCSGELMFNGKSIANQKGSYISQSGYMRQ-------------------LHIP--------------FLEGLSLTSLEESI--NTKAGGLSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTKVTLV-VAIHQPRPELWLLFTHAILLKDGRTVYCGPADEALS 1380
            LS+F P+C++   LL   DV     P  + +F  + AL       + ++ +   +  +    L  +R  +    +   +     V L D+C  + CNPTC         + D +   + W LV+   A    VL     A+   + W+   +      LL++ +    K A   +             W   S        +E Q+LH++ G    G L A+MGPSGSG +TLL+LL GR++ G   G LM +G  ++ ++    + + +++Q                   L +P               +E + L S  ++I       GLSGG KRRLS+A ELL    V+ LDEPTSGLD+ S+L+++ +L RL+    ++ +A+HQPR E++ +F   IL+  G+ V+ G   EA++
Sbjct:  430 LSYFLPACLERFQLLPTLDVGQRQTPVVSGNFKALPALRTWEVVAIRNDSSSPNAAPDTHGELITLRDAITLWANATDFSYNNSVRLVDTCTSVMCNPTCGGLTYDAELSMDGTFFAVPWDLVVPVVATIPAVL---CFAIEVLLVWKWCLLLSTQRKLLKKGKDHHRKLADVSQVESVIITFQNLSYWVDDS--------KEVQILHDVSGWATAGQLTAIMGPSGSGKSTLLELLIGRRSSGVVEGSLMISGYPLSQRRAWLKANTTFLQQEDVGLPQLTVRQSLTYSAMLRLPRKMSLAAKLIRVEQIIEEVGLGSCADTIFGGPNLPGLSGGQKRRLSIATELLTLPSVILLDEPTSGLDSASALDIIRLLSRLARAGRVIALAVHQPRQEIFQMFDRLILVAHGQAVFSGTPTEAMN 840
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BLAST of mRNA_Ecto-sp13_S_contig7683.18912.1 vs. uniprot
Match: A0A3M6TSF9_POCDA (ABC transporter domain-containing protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TSF9_POCDA)

HSP 1 Score: 125 bits (315), Expect = 4.870e-27
Identity = 87/224 (38.84%), Postives = 115/224 (51.34%), Query Frame = 1 
Query:  817 DTVPEEKQLLHNMDGDVPKGSLCALMGPSGSGNT-LLDLLTGRKAIGRCSGELMFNGKSIANQKGSYISQSGYMRQLHIPFLEGLSL-------------------------------TSLEESINTKAGG-----LSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTKVTLVV-AIHQPRPELWLLFTHAILLKDGRTVYCGPADEA 1374
            D  P +KQ+L  +      G L A+MGPSG G T LLDLLTGR+  G   G++  NG  +   +  Y  + GY+ QL +P+ E L++                               T L +  NT  GG     LSGG KRRL +AL+L+    VLFLDEPTSGLDA+SSLEL+  L  ++    LV+  IHQPR E++ LF   + L DG+  Y G    A
Sbjct:  634 DGNPSKKQILKGVSAYFNTGELVAIMGPSGCGKTTLLDLLTGRRRSGHFKGQVYINGVGLGQVQDWYARKIGYVLQLAVPYYEELTVRQNLFFAAHMRLPKETSAAKKYERVEQIIAETGLTQMANTVVGGSTGLGLSGGQKRRLCVALQLINMPSVLFLDEPTSGLDASSSLELLNHLNLVAESGRLVILTIHQPRLEIFHLFHKILFLCDGQVAYYGEPSMA 857
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BLAST of mRNA_Ecto-sp13_S_contig7683.18912.1 vs. uniprot
Match: D3BDA2_POLPP (ABC transporter G family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BDA2_POLPP)

HSP 1 Score: 124 bits (310), Expect = 1.540e-26
Identity = 89/240 (37.08%), Postives = 127/240 (52.92%), Query Frame = 1 
Query:  763 FDALLTSRRWRTRSPSGIDTVPEEKQLLHNMDGDVPKGSLCALMGPSGSGNT-LLDLLTGRKAIGRCSGELMFNGKSIAN---QKGSYISQSGYM-------RQLHIPFLEGLSLTSLEE-------SINTKAG---------------GLSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTKV--TLVVAIHQPRPELWLLFTHAILLKDGRTVYCGPADEAL 1377
               ++T  +W +  P  + T+      L N+ G    G L ALMG SGSG T LLD+L+GRK +G  +GEL+ NG  +A    +   Y++Q   M         LH   +  LS +   E       S+  + G               G+SGG +RRLS+A ELL D  +LFLDEPTSGLD+ S+ ELM++LK+L+     T++ +IHQP  E++  F + ILL  GR  Y G A E++
Sbjct:  227 ISCVVTENKWFSSKPPKVTTI------LDNVSGTCYPGQLTALMGLSGSGKTSLLDILSGRKNVGEINGELLVNGVPMARNFKRISGYVTQEDIMIGTLTCFEHLHYTAMLKLSESMPPEKKIERVNSVLAELGLSHIAQNRIGTPEKRGISGGERRRLSIAAELLVDPAILFLDEPTSGLDSHSASELMSLLKQLAKNRNRTIIFSIHQPSAEIFDQFDNLILLHHGRPYYSGKASESV 460
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BLAST of mRNA_Ecto-sp13_S_contig7683.18912.1 vs. uniprot
Match: A0A1X7U362_AMPQE (ABC transporter domain-containing protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U362_AMPQE)

HSP 1 Score: 123 bits (308), Expect = 3.860e-26
Identity = 81/220 (36.82%), Postives = 118/220 (53.64%), Query Frame = 1 
Query:  829 EEKQLLHNMDGDVPKGSLCALMGPSGSGNT-LLDLLTGRKAIGRCSGELMFNGKSIANQKGSYISQSGYMRQLHIPFLEGLSL-------------------------------TSLEESINTKAG-----GLSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLS-TKVTLVVAIHQPRPELWLLFTHAILLKDGRTVYCGPADEA 1374
            ++K+++  +      G + A+MGPSG G T  +DLL GR+ +G   G ++ NG  I   +  Y+S +GY+ QL  P+ E L++                               T L    NT  G     GLSGG KRRL +AL+LL    ++FLDEPTSGLD+ SSLEL+T L  ++ +  T+++ IHQPR E++ +F+H ILL  G+  Y G  D A
Sbjct:  667 KKKEIIRGISAYFNPGEMIAVMGPSGCGKTTFIDLLAGRQNLGSYHGRIIVNGCPIERVRDWYVSHTGYVLQLASPYYETLTVRENLTLAAQMRLPKSCSMSNKLMRVEQILRETGLISLANTVVGASIGPGLSGGQKRRLCVALQLLNMPSLIFLDEPTSGLDSLSSLELLTHLNNIAASNRTVILTIHQPRLEIYHMFSHIILLCQGQVAYHGIPDNA 886
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BLAST of mRNA_Ecto-sp13_S_contig7683.18912.1 vs. uniprot
Match: UPI00064500C9 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064500C9)

HSP 1 Score: 120 bits (300), Expect = 4.150e-26
Identity = 82/215 (38.14%), Postives = 117/215 (54.42%), Query Frame = 1 
Query:  829 EEKQLLHNMDGDVPKGSLCALMGPSGSG-NTLLDLLTGRKAIGRCSGELMFNGKSIANQKG---SYISQSGYMRQLH-----IPFLEGLSLTSLEESI------------------NTKAGG----------LSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTK-VTLVVAIHQPRPELWLLFTHAILLKDGRTVYCG 1359
            +E  +LH + G + +G L ALMGPSGSG +TLLD+L  RK  G  +G+L+ NG+ I +      SY++Q   +         + F   L L+   E+                   N K GG          LSGG KRR+S+   L+ D  ++FLDEPTSGLD+ ++L +M  L  L+ K VT++V+IHQPRPE+W LF   ++L  GR +Y G
Sbjct:   66 KEITILHGVSGVIERGELVALMGPSGSGKSTLLDILAKRKNTGHINGQLLVNGREIGDAYKNYCSYVTQEDILTPTSTVEETLKFHADLRLSDRTEAEKMTVIHRVMEEVGLAHKGNAKIGGVLPGGINVRGLSGGEKRRVSIGCGLVTDPALIFLDEPTSGLDSVNALVVMKTLLSLTRKGVTVIVSIHQPRPEIWQLFNKVMVLVKGRMIYSG 280
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BLAST of mRNA_Ecto-sp13_S_contig7683.18912.1 vs. uniprot
Match: ABCG4_DICDI (ABC transporter G family member 4 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=ABCG4_DICDI)

HSP 1 Score: 122 bits (306), Expect = 4.930e-26
Identity = 88/232 (37.93%), Postives = 130/232 (56.03%), Query Frame = 1 
Query:  814 IDTVPE-EKQLLHNMDGDVPKGSLCALMGPSGSG-NTLLDLLTGRKAIGRCSGELMFNGKSIANQKG---SYISQSG-------------YMRQLHIPFL----------EGLSLTSLEESINTKAGG----------LSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTK--VTLVVAIHQPRPELWLLFTHAILLKDGRTVYCGPAD-EALSSI 1386
            ID + E E  +L N+ G V KG + ALMGPSGSG +TLLD+L  RK+ G  +G+++ NGK I        SY++Q               +   L +P +          + L    L+  +N+K GG          LSGG K+R+S+   L+ +  +LFLDEPTSGLD+ +SL++M +L  L+    VT+V ++HQPRPE++ LF++ +++  GR VY G    E LSSI
Sbjct:  225 IDRIIEKELTILSNVSGIVEKGEMVALMGPSGSGKSTLLDILANRKSTGTITGKILVNGKEIGEAYKMFCSYVTQEEVFLETSTVYETLKFHADLRLPDMTDTEKDIRIKQVLKDVGLDRKLNSKIGGILPGGMIVKGLSGGEKKRVSIGCALVTNPSLLFLDEPTSGLDSLNSLKVMKVLLELTKMKGVTVVCSVHQPRPEIFYLFSNIMVVLKGRMVYSGSNILEYLSSI 456
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BLAST of mRNA_Ecto-sp13_S_contig7683.18912.1 vs. uniprot
Match: A0A2P8Y9E0_BLAGE (ATP-binding cassette sub-family G member 4 (Fragment) n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8Y9E0_BLAGE)

HSP 1 Score: 120 bits (302), Expect = 6.050e-26
Identity = 74/186 (39.78%), Postives = 113/186 (60.75%), Query Frame = 1 
Query:  835 KQLLHNMDGDVPKGSLCALMGPSGSG-NTLLDLLTGRKAIGRCSGELMFNGKSIANQK---GSYISQSGYMRQLHIPFLEGLSLTSLEESINTKAGGLSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTKV-TLVVAIHQPRPELWLLFTHAILLKDGRTVYCGPADEAL 1377
            K++LH + G+   G L A+MGPSG+G +TLL++L G K  G   G ++ NGK  +  +     YI Q   +R   +  L+ L +  L E  NT+AG LSGG K+RLS+ALEL+ +  +++LDEPT+GLD++S  + +++LK L+ +  T+V  IHQP   L+ +F H   L +G  +Y G     L
Sbjct:   26 KEILHGVSGEFKAGELTAIMGPSGAGKSTLLNILAGYKIRGS-EGSVLVNGKDNSKSRTRLSCYIMQDDALRP-KLTLLDLLEMLGLREHCNTQAGSLSGGQKKRLSIALELISNPPIIYLDEPTTGLDSSSCSQCVSLLKFLAQQGRTVVCTIHQPTALLFEMFDHLYSLAEGNCIYQGSIKSLL 209
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BLAST of mRNA_Ecto-sp13_S_contig7683.18912.1 vs. uniprot
Match: A0A2B4SPV7_STYPI (ABC transporter G family member 22 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SPV7_STYPI)

HSP 1 Score: 121 bits (304), Expect = 1.240e-25
Identity = 86/224 (38.39%), Postives = 112/224 (50.00%), Query Frame = 1 
Query:  817 DTVPEEKQLLHNMDGDVPKGSLCALMGPSGSGNT-LLDLLTGRKAIGRCSGELMFNGKSIANQKGSYISQSGYMRQLHIPFLEGLSL-------------------------------TSLEESINTKAGG-----LSGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTKVTLVV-AIHQPRPELWLLFTHAILLKDGRTVYCGPADEA 1374
            D     KQ+L  +      G L A+MGPSG G T LLDLLTGR+  G   G++  NG  +   +  Y  + GY+ QL +P+ E L++                               T L +  NT  GG     LSGG KRRL +AL+L+    VLFLDEPTSGLDA+SSLEL+  L  ++    LV+  IHQPR E++ LF   + L DG   Y G    A
Sbjct:  632 DGSSSRKQILKGVSAYFNTGELVAIMGPSGCGKTTLLDLLTGRRRNGHFEGQVYINGVGLGQVQDWYARKIGYVLQLAVPYYEELTVRQNLFFAAHMRLPKETSAAKKYERVEQIIAETGLTQLANTVVGGSTGLGLSGGQKRRLCVALQLINMPSVLFLDEPTSGLDASSSLELLNHLNLVAESGRLVILTIHQPRLEIFHLFHKILFLCDGEVAYYGEPSMA 855
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BLAST of mRNA_Ecto-sp13_S_contig7683.18912.1 vs. uniprot
Match: A0A485LR57_9STRA (Aste57867_24115 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LR57_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.970e-25
Identity = 90/238 (37.82%), Postives = 127/238 (53.36%), Query Frame = 1 
Query:  802 SPSGIDTVPEEKQLLHNMDGDVPKGSLCALMGPSGSGNT-LLDLLTGRKAIGRCSGELMFNGKSIANQKGS-YISQSGYMRQLHIPFLEGLSL-------------------------------TSLEESINTKAGGL-------SGGLKRRLSLALELLPDRRVLFLDEPTSGLDATSSLELMTILKRLSTK--VTLVVAIHQPRPELWLLFTHAILL-KDGRTVYCGPADEALSSI 1386
            +PSG    P+ KQ+LH++ G    G L A+MGPSGSG T LL+L++GR   G   G  M N +    +    ++S  GY+ Q    F+E +++                                 LE++ NT  GGL       SGG KRRLS+A ELL    VL LDEPTSGLD+TSSL L+ +L  L+ +  +T+V  IHQPR E++ LF   +L+ + G  +YCGP+ +A S +
Sbjct:  116 NPSGKKGTPD-KQILHDVSGTFKPGRLTAIMGPSGSGKTTLLNLISGRVITGSYYGYRMLNNELTKPRDYEVFMSSQGYVEQTDT-FIETMTVRESLLFAAYLRLPDTMTLGDKIDRVQTVLRVVQLEDAANTVIGGLLSGLKGISGGQKRRLSIATELLRLPSVLILDEPTSGLDSTSSLLLVQMLASLAAQQGLTVVSTIHQPRAEIYDLFNDVVLMDRGGFLIYCGPSADARSHL 351
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7683.18912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G376_ECTSI1.060e-31094.64ABC transporter domain-containing protein n=1 Tax=... [more]
A0A388LTX5_CHABU3.370e-2727.49ABC transporter domain-containing protein n=1 Tax=... [more]
A0A3M6TSF9_POCDA4.870e-2738.84ABC transporter domain-containing protein n=2 Tax=... [more]
D3BDA2_POLPP1.540e-2637.08ABC transporter G family protein n=1 Tax=Polysphon... [more]
A0A1X7U362_AMPQE3.860e-2636.82ABC transporter domain-containing protein n=2 Tax=... [more]
UPI00064500C94.150e-2638.14hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
ABCG4_DICDI4.930e-2637.93ABC transporter G family member 4 n=1 Tax=Dictyost... [more]
A0A2P8Y9E0_BLAGE6.050e-2639.78ATP-binding cassette sub-family G member 4 (Fragme... [more]
A0A2B4SPV7_STYPI1.240e-2538.39ABC transporter G family member 22 n=2 Tax=Styloph... [more]
A0A485LR57_9STRA1.970e-2537.82Aste57867_24115 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7683contigEcto-sp13_S_contig7683:635..7303 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score859.0
Seed ortholog evalue1e-246
Seed eggNOG ortholog2880.D7G376
Model size1395
KEGG koko:K05679,ko:K05681
KEGG TC3.A.1.204
KEGG Pathwayko01523,ko02010,ko04976,map01523,map02010,map04976
Hectar predicted targeting categoryother localisation
Exons13
EggNOG free text desc.pectin acetylesterase activity
EggNOG OGsCOG1131@1,KOG0061@2759,KOG4287@1,KOG4287@2759
Ec32 ortholog descriptionAAA ATPase domain
Ec32 orthologEc-03_004810.1
Cds size1395
COG Functional cat.M
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04090,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7683.18912.1prot_Ecto-sp13_S_contig7683.18912.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7683 635..7303 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464038.5652392-CDS-Ecto-sp13_S_contig7683:634..7691681464038.5652392-CDS-Ecto-sp13_S_contig7683:634..769Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 635..769 -
1681464038.58348-CDS-Ecto-sp13_S_contig7683:1311..13851681464038.58348-CDS-Ecto-sp13_S_contig7683:1311..1385Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 1312..1385 -
1681464038.5949194-CDS-Ecto-sp13_S_contig7683:1720..18351681464038.5949194-CDS-Ecto-sp13_S_contig7683:1720..1835Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 1721..1835 -
1681464038.6064014-CDS-Ecto-sp13_S_contig7683:2098..21641681464038.6064014-CDS-Ecto-sp13_S_contig7683:2098..2164Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 2099..2164 -
1681464038.6199558-CDS-Ecto-sp13_S_contig7683:2403..24941681464038.6199558-CDS-Ecto-sp13_S_contig7683:2403..2494Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 2404..2494 -
1681464038.6325839-CDS-Ecto-sp13_S_contig7683:2729..28611681464038.6325839-CDS-Ecto-sp13_S_contig7683:2729..2861Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 2730..2861 -
1681464038.6453466-CDS-Ecto-sp13_S_contig7683:3391..34241681464038.6453466-CDS-Ecto-sp13_S_contig7683:3391..3424Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 3392..3424 -
1681464038.6599467-CDS-Ecto-sp13_S_contig7683:4141..42561681464038.6599467-CDS-Ecto-sp13_S_contig7683:4141..4256Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 4142..4256 -
1681464038.6720808-CDS-Ecto-sp13_S_contig7683:4563..47171681464038.6720808-CDS-Ecto-sp13_S_contig7683:4563..4717Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 4564..4717 -
1681464038.6894386-CDS-Ecto-sp13_S_contig7683:5790..59191681464038.6894386-CDS-Ecto-sp13_S_contig7683:5790..5919Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 5791..5919 -
1681464038.7028995-CDS-Ecto-sp13_S_contig7683:6390..64921681464038.7028995-CDS-Ecto-sp13_S_contig7683:6390..6492Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 6391..6492 -
1681464038.719401-CDS-Ecto-sp13_S_contig7683:6808..68981681464038.719401-CDS-Ecto-sp13_S_contig7683:6808..6898Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 6809..6898 -
1681464038.7306106-CDS-Ecto-sp13_S_contig7683:7144..73031681464038.7306106-CDS-Ecto-sp13_S_contig7683:7144..7303Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7683 7145..7303 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7683.18912.1

>prot_Ecto-sp13_S_contig7683.18912.1 ID=prot_Ecto-sp13_S_contig7683.18912.1|Name=mRNA_Ecto-sp13_S_contig7683.18912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=465bp
QDFNGGPCCLQFNCMVQKGYYPTADDRLRGTFVLSTLQDALTGALILERG
NVNSEAVESVWDVATYTGQTETSLRNLAALYKAELSFFAPSCIDHGLLLV
GDVELWMCPSGTESFDTVDALCLTDEETGALSGVEFQVTLDDVRLRLAAE
ISVDAWERIQQVVLFDSCNDINCNPTCMSELIPGTRDESESTLVWTLVLA
TCAVALLVLGGGLIAVVWGVRWRNRAVGIVTSALLEESRKSRDKQAPSLR
CLGCFDALLTSRRWRTRSPSGIDTVPEEKQLLHNMDGDVPKGSLCALMGP
SGSGNTLLDLLTGRKAIGRCSGELMFNGKSIANQKGSYISQSGYMRQLHI
PFLEGLSLTSLEESINTKAGGLSGGLKRRLSLALELLPDRRVLFLDEPTS
GLDATSSLELMTILKRLSTKVTLVVAIHQPRPELWLLFTHAILLKDGRTV
YCGPADEALSSITRW
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mRNA from alignment at Ecto-sp13_S_contig7683:635..7303-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7683.18912.1 ID=mRNA_Ecto-sp13_S_contig7683.18912.1|Name=mRNA_Ecto-sp13_S_contig7683.18912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6669bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7683:635..7303- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGACTTCAACGGCGGCCCGTGCTGCTTGCAGTTCAACTGTATGGTGCA
GAAGGGGTACTATCCGACCGCGGATGATCGACTAAGGGGTACTTTCGTCT
TATCTACACTTCAGGATGCCCTTACGGGCGCACTCATTCTGGAGCGTGGC
AATGTCAATGTGAGGCGCGCCCCGAGCGTAGACCGCTAGACTTACCGTGA
TAGTACGTACGAATCGCTTGCTGCACACAGGCCTCCGCTATACAAGAATG
GATGCTTTCGATGGCTCAACCCGCTTTTACGAGTCGACCCCCTCGGACCC
GATCCGGACCGCCGACTGCGGGGCCCCACGCAGTTTTAGACTAAAACACG
TAATTTGAAACCTCTCGCGCCGTATACATCTGTCCGTTGGCCTTCTTCTA
TACAGAGCGAGGCTGTTGAAAGCGTCTGGGACGTGGCTACCTACACAGGG
CAAACTGAAACATCTCTTCGCAACTTGGCCGCACTCTACAAGGCGGTGAG
CAGGGATTCTAAGCACCAATGATCCCCCACGACGATCAGCCCAACACGAC
AGTATCAGACAACTCTCTTCGGCAAACCATGCATAGGTGGTCCAAGGGCA
CTTGTCGTCGCCATCCATAGTACCTGATGATGTCACACGGCGCTCGTTTG
AGAACAATACAAACGAGCGCGAGGTCTGTGCTACAAGAGGAAACAAATTC
ACTTGTTATCAGAGTTGGTGCCGTCACACGGTTGTACGAAGTGCACAGCA
AGAACCCCGTTTGTAGACGTTTCCATCCGCGTGTGTGTGTGCACCTGTCA
ACTGCATGTAGGAGCTGTCCTTCTTCGCTCCAAGCTGCATCGATCACGGG
CTACTACTTGTCGGCGACGTCGAACTATGGATGTGCCCATCGGGCACCGA
ATCATTCGACACCGTGAGAAAAACTTGATGTCACCGTTAGACAGGCAGCG
CTTCCGTCAGTCAAGTTTGGATGGTTTACTGGGCTCGAGGACCAAGACCG
TTAACCGCGGTAGGCCTGTTCGTTAACTCCGCGCATGGTTTCTCTCGTGT
ATCTGGCCATGAGCGCGGCTAATGTGGTAGATCCTGAGAAACACCATCAA
ACACCGCACCGCCCGCGTTGATGTGGTGAGGTGAATCGTCCCACTTGTGT
TGGAAAGCTGTCTGTCTACAGTGTTGGAGGTTGACTGTCATCGCATACGT
TTGGGGGTCATCAACAAACCAAGCGGGATGGGTTGGTGGTGTCTCGTTCC
GGTCCGATGCTTTTTGCCAGGAATCAGGATCTTAAATCAACCCGTTCTGA
ATATTCTTGACGTTATCAGCCATGAGCCCGGTCTCCCATTCATCACAGAA
TCCTCTCTGCGCCTTCCCCCGGTGTGCTATTCAGGTCGATGCTCTTTGCC
TTACCGATGAAGAAACTGGAGCCTTATCTGGGGTCGAGTTCCAAGTAACT
CTGGATGACGTTCGCCTACGCTTGGCGGCTGAGATTTCTGTGGACGCATG
GGAGCGCATTCAGGTAAAGAAGCGGGGCGGTGGGTTTCGTCCGCAAGTTG
GAAGGGGGTGCATTGGTAACGTGCGTCAGGGTTTTGAGATCGGTGGCTTC
CCACCAAGCTTCAATGTAATCTGAACACCGACATGGAAATAGTTGCAATG
TGTAATTGGAACGTGTAACATCGACATGATATTCGCAAGAAAAACACACG
GCAAATCAGAACCGAAGGCTTGCTGCGCCATGATGGATCGCTAGGTTTCA
AAACCGGGTGGTGAAGCATGGTGCAATATGGTGCATCAAGGTGATTCATG
AGGTTCAGAAGAGAAACCGAAAAATGCTAACAACGAAATTGTTCGAACAA
ACGTTGTACTATTCATGACGCACCATGAGGATCTCGGTATGAATCATGAT
TCCTATAGAGTCATATTTCGATGTACTCTTTTTCATGGATCTCGTGAGAC
TGCTCACGGGAAACATGAGACCAACACAAGAGATATGTCCCCACTGAGCA
TCATGTCGTATCATGGTGCATCATGGTACCATATACCATATCTCGATGAC
CTGACCCGACACTCGTCAACTTGTGTTGATCTCTCGTTTTTTTCTTGTGG
GACAACGTGGCCACGCCTACGCACTGCGGTCCTGTACCGTTACGTCGAAC
GGATAACCATCTGCAATGATTGCTTATCTTTCCACCGCCAATTACACAAT
TTTCGAAGATTGACGGAATAAGTGTACGAACGGCCATGGAGCAGTGGTGG
AATGGGCGTGGCGACGCTAACGAGCAGGCAAGTCCACTTTGGTGTTCCAC
ATGTACAGTAGTCTAGAACCACATGTACAGTAGTCTAGAACCGCCACCAC
GGTGCCCATTGTGTTGTCCTTTCTGCATGAAGCAGATACGGCAGCAGCTT
CTCTGTTCTTCTGCTTGTTCGTACGGGAAAGCGCCTGAGTTATTGCCGTT
GATGATGGCCGAGCTGCTACCCGACAATCTTACCTAGGCTGCTAGTATGG
TCCCTTCTCCGCCATGGGTGTTGATGTTTGGACTATGGTTGTTTTGATTG
GTTTTTCGACGGGCATCATGTCCTTCACTCTTTGAGCAGGTGGTTCTCTT
CGACTCATGCAACGACATCAACTGCAACCCAACCTGCATGTCTGAGCTGA
TACCGGGCACACGAGATGAGAGCGAGAGTACGCTGGTATGGACCCTCGTG
CTTGCAACCTGCGCTGTGGCCTTGTTGGTGCTTGGGGGCGGTAAGTGTTC
TAGCATCCATAAACTCAAGCCCGCGCCGGAGCTACCTGTGCTGTACCAGG
ACTTATTGGCGCTTCTGTTGTGGACTCGCTCCTATTCGATGCTCGTCATC
GAATACTCTGCCGCCACAATCAATCTTGCCCAAAGCGTCTGTAACCAACC
GGTGAAGCTTTTGGGCGAGGCAGTCGTCAAACACAAACTGCAGTAGCTTT
ACATGTACCTCATGGCATCACCTGTATCACGTATAGGTCATAAGACTGTA
TTCGGACAGCTTGTATCGAATGTTGCCCTATGCTCTCTGGCATGCAGGGC
TAATCGCAGTGGTGTGGGGTGTACGGTGGAGAAACCGCGCAGTTGGCATC
GTGACATCTGCTTTGCTAGAAGAAAGCCGAAAATCCCGAGACAAACAAGC
GCCAAGCCTCAGGTACGCCCAACGCACACCAAATGTTTCCATGTAAAAAA
ACATCACTGTTCTGGCCAACATGTCGCATTCGAATGCGACCCAAGTGGTT
CCTTGTAGAAAATTATCACTGTTCTTACCCGTCATGCAAATCAACGTGTC
CTTAAACCTGCGATCCACATCTACGTCACCCGGCCATGCATATTTTTTCA
CCTTGCTGGCTTAGTACCGCCCTGTGCCACCCACGGCAAAACCTGGGGTT
CTGTCCGTGTTTCGGGACGATTTTAATCAAGTTGTTGAAAAAACGGCGAC
TTGTCCCTGATTATCAGATGTAAGCGTACAGTGAATGTTAACATTCCCCG
GATCTTATCACAACACCATTCATACGCTTATCCGGGTCTCTTTCTGATGA
TTGACCTGATCGAATGGCCAACAGCGATCAGTATAGGCATCTGTCGCTGA
CATCACGTGGACATGGCCCTGATGGCAAGACTGACTCCGTGCTGGAATGG
AACAGCCTCAGCTACTGGCTTCCACCGACACACCGGTGCGCACCTTCGGT
CATTGAAATATTTCAATGTCACCCTGGCAATCTTAGGAGAAAATCGGTCG
CCCATCATGCCATTTATTGTGTTATGAATACGGGCCTTGTTTGCAATAGC
AGTCGATGGCACACGAACAACGCTCGTCTTCCAAGAAAGGCCCACCCGCT
TTTGTTCGACGCGAAAACGTACCCCGTAGATGCCTAGGTTGTTTTGACGC
CCTTCTGACAAGGTGAGGCTGACAGTGGCGACAAGAAGGATTTTGACAAA
AGTGAGGGAATGAGAATGGTCGAGATTGCAGCTTGATGACTGCCAAGATA
CTTCGTGCACCTCGTGGTTGAGGAAAAAAACATTGTCCGCGAGTTCCAAT
GCAAGCACACCGAAGGCCTAGAGTCGGAGATGGGATGACGGAACGGAAAT
ATTCAAGTACACGCTCACATGACACCCTCAAAATTCAAAGTCGTATTTGA
AACAAAGCATTATTGAAATAATACATTAGATACCAACGAAAATGAATCGA
GTTCGGCACTAAGAATCAGGATATGGACATGAGCAGGAGAACAACGTAAA
AAGTGCGCGTACCACTTACGATGACAACATGAGCGGGACTATTCTCTTAG
AGGACAAATGCGGCCTGGCCTGGTGATTTCGTGCTCGATGTCGTTGTCGG
TCCTTAGGGTATCGTTTCGTGCCCGCCGCCTTCTAAGCTTTTGTTGCCAC
TTGCTCTCCTCCTGTTCGGCGCTATCCGTTGTGTTCGAAAAGTCGTCGGT
GGCGGACACGTTCGCCATCCGGCATCGACACTGTCCCCGAAGAAAAGCAG
CTGCTACACAACATGGATGGAGACGTCCCTAAGGGATCCTTGTGCGCGTT
GATGGGACCTTCAGGCAGTGGCAAGTACACCTAGAGAATATTTCAACCAA
CAGTCTCTCACCGTTGAATATTCCACATCCACACGATCCAAAACACAAGG
ATAGTCTGCATCGCTTCGCTTCGCCGAGTGCCTTGAAGCCCTCCACAACA
TTTTATCCTCCCCTTAACCTGCTTCCGGTTGCGCGTGCCAACGAGTGCCC
AGGATGTCATGGATCTCATGTTTTTCGGTGCGTCCATTTTCGTCACACTC
AGGCAAGAGCACTCTGCTCGATCTGCTCACCGGAAGGAAGGCGATCGGTC
GGTGCAGCGGGGAGTTGATGTTCAACGGAAAATCTATCGCCAACCAAAAG
GTTTCTCGAGTTGATGCAGGGATGGGTAGATCCGAGCAGGGGAAGTGGGC
TTGGAAATGAAACAAGGAGCCCATTTTCCGTTGCCACATGGAAGCACAAT
TGTCCCGCGAGGCATTCGAAACTCTTCTACGGCTGGTAGAGCCATGTAGG
CCAGACACGATCAAGCCTTGCCGTACGCACACCACCCGGTCAATACACCG
TGGCCCTTTGCGCTGCCGCACCCTTTCTCAACGACCCAGGGCTCATACAT
CTCCCAGTCCGGCTACATGCGGCAGCTTCATATTCCCTTCCTGGAAGGCC
TTTCGGTCTTGGAGAATTTGGTGTTTGCGGTCGTCCTGAGGTACCCGGGC
ACTCTTGAGGTGCAAACAAAACGAATTGAAACGTGAGTCTGGGATTGGAA
CTTGGTGTTGCTGCCAGGTAAAACTTGCGATACACATCGTCCCTCCTCTA
CAATACCTACCAAGCACGGAGCCACGCATATCTGGGAAACATGCATCAAA
ACGACGTGTGCTGCCGCATTTCTCTTGATGGTGCCGTGTTGTTGACATCC
ACGTCCAGGGCAATAAAGCTGACGTCCCTAGAGGAAAGCATCAACACCAA
AGCGGGCGGCTTGAGCGGGGGACTCAAGCGGCGTTTGTCCCTCGCCCTAG
AACTCTTGCCCGACCGCCGAGTTCTGTTCTTAGGTGAGAAGTCGCCGAAG
TGATGCTTTTGAGAATAGCGCTGGTTGTGGGTGATGCCTGGTATCATTCG
TTGTTATCATGCCTTGTATTATTTGGGAGAGTTGTTGGTGAAACTGTTCC
AAATACCAGCAGACATTGGGTAGCCTTGAATCCACCGAGCAAGTTAGCGC
TGTGACCAGGAATACCATTTTTCCAGGAAGCGAGATAGAAAGTGCACACA
CTTCCTTTCGTCTGTCATTTTGCTGGCAGCCTCTCTCTCGATTCTTCCCT
CGGGTGAATGAAGAATGCGCCCATCCGATTGTTCTCTGAATCAATGTTGC
ACGCAACAACCACCGAAGACGAGCCGACCTCAGGATTAGATGCCACTTCG
TCTCTGGAGCTCATGACTATTCTCAAGCGCCTGTCGACAAAGGTATGACG
CGGCGAGGGTTGAAGCTGACTCGACTTACGTGTGATGTGTTGCATTCTAG
AATAATAACATGAACGTCATCTTGACCGCCTTTTCATAAAGAAATGATTG
GTTTCACTCCCCGCTTAAACGCAGCGATCATCACAGTCTACTTCGACGCA
GCACTTGATGGGTCACTATTTGGTTGGAGCAGAGTCGTTTCGTACTTCCG
CGTACTTCCGAGGCGGGCTGTGAACATCACTGTGTCATCACTGTGCTTGT
CCATTTGAATTCGAATGGGTTCGTCGGCCTCATTTTCTCACTATTGTGCT
CGACTTGAACTATCAGTTCTTCGTGTTACTTGCTGCTGCCGGCTTTCTCG
AGCCCGGTAAAGTAGTCGATGGGCAAACTTTATCCATGGCCGAGTGCTGT
GCCGCTTGCTTTCAGTCGCGCGTCGCACTTCGCGCGCTTGTTTGCTAGAG
CCTGGGGCGTGGAAAAAATTACTTTCGAACAGCCCACATGCCTGCACGCT
ATACGCACAATGGCACGCGTGGGTCGCCTTCCAGGTCACTTTGGTTGTGG
CCATTCATCAGCCTCGACCGGAGCTTTGGCTGCTATTTACCCACGCGATC
CTTCTCAAAGACGGCAGAACTGTATACTGCGGCCCGGCAGACGAAGCTCT
GAGCAGCATCACCAGGTGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7683:635..7303-

>mRNA_Ecto-sp13_S_contig7683.18912.1 ID=mRNA_Ecto-sp13_S_contig7683.18912.1|Name=mRNA_Ecto-sp13_S_contig7683.18912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1395bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7683:635..7303- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGACTTCAACGGCGGCCCGTGCTGCTTGCAGTTCAACTGTATGGTGCA
GAAGGGGTACTATCCGACCGCGGATGATCGACTAAGGGGTACTTTCGTCT
TATCTACACTTCAGGATGCCCTTACGGGCGCACTCATTCTGGAGCGTGGC
AATGTCAATAGCGAGGCTGTTGAAAGCGTCTGGGACGTGGCTACCTACAC
AGGGCAAACTGAAACATCTCTTCGCAACTTGGCCGCACTCTACAAGGCGG
AGCTGTCCTTCTTCGCTCCAAGCTGCATCGATCACGGGCTACTACTTGTC
GGCGACGTCGAACTATGGATGTGCCCATCGGGCACCGAATCATTCGACAC
CGTCGATGCTCTTTGCCTTACCGATGAAGAAACTGGAGCCTTATCTGGGG
TCGAGTTCCAAGTAACTCTGGATGACGTTCGCCTACGCTTGGCGGCTGAG
ATTTCTGTGGACGCATGGGAGCGCATTCAGCAGGTGGTTCTCTTCGACTC
ATGCAACGACATCAACTGCAACCCAACCTGCATGTCTGAGCTGATACCGG
GCACACGAGATGAGAGCGAGAGTACGCTGGTATGGACCCTCGTGCTTGCA
ACCTGCGCTGTGGCCTTGTTGGTGCTTGGGGGCGGGCTAATCGCAGTGGT
GTGGGGTGTACGGTGGAGAAACCGCGCAGTTGGCATCGTGACATCTGCTT
TGCTAGAAGAAAGCCGAAAATCCCGAGACAAACAAGCGCCAAGCCTCAGA
TGCCTAGGTTGTTTTGACGCCCTTCTGACAAGTCGTCGGTGGCGGACACG
TTCGCCATCCGGCATCGACACTGTCCCCGAAGAAAAGCAGCTGCTACACA
ACATGGATGGAGACGTCCCTAAGGGATCCTTGTGCGCGTTGATGGGACCT
TCAGGCAGTGGCAACACTCTGCTCGATCTGCTCACCGGAAGGAAGGCGAT
CGGTCGGTGCAGCGGGGAGTTGATGTTCAACGGAAAATCTATCGCCAACC
AAAAGGGCTCATACATCTCCCAGTCCGGCTACATGCGGCAGCTTCATATT
CCCTTCCTGGAAGGCCTTTCGCTGACGTCCCTAGAGGAAAGCATCAACAC
CAAAGCGGGCGGCTTGAGCGGGGGACTCAAGCGGCGTTTGTCCCTCGCCC
TAGAACTCTTGCCCGACCGCCGAGTTCTGTTCTTAGACGAGCCGACCTCA
GGATTAGATGCCACTTCGTCTCTGGAGCTCATGACTATTCTCAAGCGCCT
GTCGACAAAGGTCACTTTGGTTGTGGCCATTCATCAGCCTCGACCGGAGC
TTTGGCTGCTATTTACCCACGCGATCCTTCTCAAAGACGGCAGAACTGTA
TACTGCGGCCCGGCAGACGAAGCTCTGAGCAGCATCACCAGGTGG
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