prot_Ecto-sp13_S_contig7677.18906.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7677.18906.1
Unique Nameprot_Ecto-sp13_S_contig7677.18906.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length649
Homology
BLAST of mRNA_Ecto-sp13_S_contig7677.18906.1 vs. uniprot
Match: A0A6H5JIQ8_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ8_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 2.570e-128
Identity = 342/565 (60.53%), Postives = 353/565 (62.48%), Query Frame = 0
Query:    1 MEASSSESTTVYFCHVCMSRVRVRKTSTEELECRRCEQTFVEELLESVVGNAALGGIADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGQGVPVIGMPFSMLQALGVGGMHPLNARPATPGGDRGEGDGGEQXXXXXXXXXXXXXAEGGRAGPFLFGGRFAMGSGXXXXXXXXXXXXXXXXXXXXXXXXXFSSRVQRFRQGXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXAWPGASMNPEHNASNGGPPPQIANSVEQFLEQVLGGGMVQMPGGMMQGGMVHFGGGGPVPAEGRIAGRGGQXXXXXXXXXXXXXXXXXXXXXXXXXLDAENPFLGTLLQALGGAGAEHAEIFIGPNMQRMSGAARGGGGDDXXXXXXXXXXXXAPDFAGGGIGAMLSGPGGLGFLLRGIGMPGAMGGMGMXXXXXPGGNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTIIVAKGSELEGQECAVCKDEFAAGDKTRELPCQHSFHELCILPWVAERNTCPTCRHELPTDDS 565
            MEASSSEST+VYFCHVCM+RVRVRKTST+ELECRRCEQTFVEELLE+VVGNAALGGIAD  XXXXXXXXXX   X                                                GG HP       PGG R                               F  + A G G                      XXX           XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX WPGASMNPE NA+NGGPPPQIANSVEQFLEQVLGGGMVQMPGGMMQGGMVHFGGGGPV  EGR AGR GQ     XXXXXXXXXXXXXXX     LDAENPFLG   +                ++ R   A  GG           XXXXXA DFA                    IGMPGAMGGMG+  X  PGGNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTI VAKGSELEGQECAVCKDEFAAG+K RELPCQHSFHE CILPWVAERNTCPTCRHELPTDDS
Sbjct:    1 MEASSSESTSVYFCHVCMTRVRVRKTSTQELECRRCEQTFVEELLEAVVGNAALGGIADDDXXXXXXXXXXGPAX------------------------------------------------GGGHP------RPGGARDRN---------------------------AF--QHAAGLGVGRDASVERTTGDAWWGPGTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWPGASMNPEQNANNGGPPPQIANSVEQFLEQVLGGGMVQMPGGMMQGGMVHFGGGGPVSGEGRNAGRAGQGQAAAXXXXXXXXXXXXXXXGGDGGLDAENPFLGRRTRR---------------DLHRAQHATXGG-----------XXXXXASDFAXXXXXXXXXXXXXXXXXXXXIGMPGAMGGMGLGLXMGPGGNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTITVAKGSELEGQECAVCKDEFAAGEKARELPCQHSFHEQCILPWVAERNTCPTCRHELPTDDS 456          
BLAST of mRNA_Ecto-sp13_S_contig7677.18906.1 vs. uniprot
Match: D7FYE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE5_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 2.360e-96
Identity = 320/489 (65.44%), Postives = 325/489 (66.46%), Query Frame = 0
Query:    1 MEASSSESTTVYFCHVCMSRVRVRKTSTEELECRRCEQTFVEELLESVVGNAALGGIADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPGQGVPVIGMPFSMLQALGVGGMHPLNARPATPGGDRGEGDGGEQXXXXXXXXXXXXXAEGGRAGPFLFGGRFAMGSGXXXXXXXXXXXXXXXXXXXXXXXXX--FSSRVQRFRQGXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXAWPGASMNPEHNASNGGPPPQIANSVEQFLEQVLGGGMVQMPGGMMQGGMVHFGGGGPVPAEGRIAGRGGQXXXXXXXXXXXXXXXXXXXXXXXXXLDAENPFLGTLLQALGGAGAEHAEIFIGPNMQRMSGAARGGGGDDXXXXXXXXXXXX-APDFAGGGIGAMLSGPGGLGFLLRGIGMPGAMGGMGMXXXXXPGGNVGDYAFGDLSQLIQQLMAADTNR 486
            MEASS EST+VYFCHVCMSRV VRKTSTEELECRRCEQTFVEELLESVVGNAALGGI       XXXXXXXXXXXXXXXXXXXXXXXXXXXX          TPGQG PVIGMPFSMLQALGVGGMHPLNARPA PGGDRGEG+GGEQXXXXXXXXXXXX  EGGRAGPFLFGGRFAMGSG XXXXXXXXXXXXXXXXXXXXXX    FSSRVQRFRQ                                                             ++ GP    A                                                       XXXXXXXXXXXXXXXXXXLDAENPFLGTLLQALGGAGAEHAEIFIGPNMQRMSGAARGG    XXXXXXXXXXXX APDFAG  IGAML       FLLRGIG+PGAMGGMGMXXXX PGGNVGDYAFGDLSQLIQQLMAADTNR
Sbjct:    1 MEASSRESTSVYFCHVCMSRVGVRKTSTEELECRRCEQTFVEELLESVVGNAALGGI------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGRRGTRGGTPGQGAPVIGMPFSMLQALGVGGMHPLNARPAAPGGDRGEGEGGEQXXXXXXXXXXXX--EGGRAGPFLFGGRFAMGSGGXXXXXXXXXXXXXXXXXXXXXXGGSSFSSRVQRFRQ-------------------------------------------------------------AHAGPQTPRARQXXXXXXXXX--------------------------------------------XXXXXXXXXXXXXXXXXXLDAENPFLGTLLQALGGAGAEHAEIFIGPNMQRMSGAARGGXXXXXXXXXXXXXXXXXAPDFAGXXIGAMLGXXXXXXFLLRGIGIPGAMGGMGMXXXXGPGGNVGDYAFGDLSQLIQQLMAADTNR 376          
BLAST of mRNA_Ecto-sp13_S_contig7677.18906.1 vs. uniprot
Match: D0MY65_PHYIT (RING-type E3 ubiquitin transferase n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0MY65_PHYIT)

HSP 1 Score: 135 bits (341), Expect = 2.740e-32
Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = 0
Query:  462 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTIIVAKGSELEGQECAVCKDEFAAGDKTRELPCQHSFHELCILPWVAERNTCPTCRHELPTDD 564
            GN GDYAFG+++ +I QLM  D NRHG PPA+K+ V+ LP + + +G      EC VCKD FA  D+   LPC+HSFH  CILPW+ + N+CP CR ELPTDD
Sbjct:  151 GNAGDYAFGNMANVINQLMQNDPNRHGAPPAAKEVVDKLPKVKITQGEVDGSAECPVCKDFFAVDDEVHRLPCEHSFHPDCILPWLKQHNSCPLCRFELPTDD 253          
BLAST of mRNA_Ecto-sp13_S_contig7677.18906.1 vs. uniprot
Match: M4BXL0_HYAAE (RING-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BXL0_HYAAE)

HSP 1 Score: 130 bits (328), Expect = 2.890e-32
Identity = 59/104 (56.73%), Postives = 75/104 (72.12%), Query Frame = 0
Query:  462 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTIIVAKGSELEGQ-ECAVCKDEFAAGDKTRELPCQHSFHELCILPWVAERNTCPTCRHELPTDD 564
            GN GDYAFG+++ +I QLM  D NRHG PPA+K+ VE LP + V + +E++G  EC VCKD FA  D+   LPC HSFH  CI+PW+ + N+CP CR ELPTDD
Sbjct:    7 GNAGDYAFGNMANVINQLMQHDPNRHGAPPAAKEVVEMLPKVKVTQ-NEVDGSAECPVCKDLFAVDDEVHCLPCNHSFHPDCIVPWLKQHNSCPLCRFELPTDD 109          
BLAST of mRNA_Ecto-sp13_S_contig7677.18906.1 vs. uniprot
Match: A0A067CFN4_SAPPC (RING-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFN4_SAPPC)

HSP 1 Score: 136 bits (343), Expect = 4.290e-32
Identity = 63/126 (50.00%), Postives = 80/126 (63.49%), Query Frame = 0
Query:  443 IGMPGAMGGMGMXXXXXPG----GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTIIVAKGSELEGQECAVCKDEFAAGDKTRELPCQHSFHELCILPWVAERNTCPTCRHELPTDD 564
            IG  G +  +G      PG      +GDYAFG++S +I  LM  D N+HG PPASK  VE+LP + + +    + Q+CAVCKD FA  D+ R LPC H FH  CILPW+A+ N+CP CR ELPTDD
Sbjct:  164 IGGSGLLNAIGSMLQMQPGQGAPATIGDYAFGNISTIINHLMQNDPNQHGAPPASKSVVESLPVVHITEEDVAKNQDCAVCKDMFALHDEIRRLPCTHDFHPDCILPWLAQHNSCPVCRFELPTDD 289          
BLAST of mRNA_Ecto-sp13_S_contig7677.18906.1 vs. uniprot
Match: A0A329S505_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S505_9STRA)

HSP 1 Score: 135 bits (339), Expect = 8.190e-32
Identity = 59/104 (56.73%), Postives = 75/104 (72.12%), Query Frame = 0
Query:  462 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTIIVAKGSELEGQ-ECAVCKDEFAAGDKTRELPCQHSFHELCILPWVAERNTCPTCRHELPTDD 564
            GN GDYAFG+++ +I QLM  D NRHG PPA+K+ VE LP + + +  E++G  EC VCKD FA  D+   LPC+HSFH  CILPW+ + N+CP CR ELPTDD
Sbjct:  170 GNAGDYAFGNMANVINQLMQNDPNRHGAPPAAKEVVEKLPKVKITQ-VEVDGSAECPVCKDSFAVDDEVHRLPCEHSFHPDCILPWLKQHNSCPVCRFELPTDD 272          
BLAST of mRNA_Ecto-sp13_S_contig7677.18906.1 vs. uniprot
Match: A0A3R7G1L0_9STRA (RING-type E3 ubiquitin transferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G1L0_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.190e-31
Identity = 58/103 (56.31%), Postives = 70/103 (67.96%), Query Frame = 0
Query:  462 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTIIVAKGSELEGQECAVCKDEFAAGDKTRELPCQHSFHELCILPWVAERNTCPTCRHELPTDD 564
            GN GDYAFG+++ +I QLM  D NRHG PPASK+ VE LP + + +       EC VCKD FA  D+   LPC HSFH  CILPW+ + N+CP CR ELPTDD
Sbjct:  185 GNPGDYAFGNMANVINQLMQNDPNRHGAPPASKEVVEKLPKVKITQSEVDNSAECPVCKDFFAVDDEVHRLPCDHSFHPDCILPWLKQHNSCPLCRFELPTDD 287          
BLAST of mRNA_Ecto-sp13_S_contig7677.18906.1 vs. uniprot
Match: A0A3R7W2Z9_9STRA (RING-type E3 ubiquitin transferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7W2Z9_9STRA)

HSP 1 Score: 134 bits (338), Expect = 3.250e-31
Identity = 59/104 (56.73%), Postives = 76/104 (73.08%), Query Frame = 0
Query:  462 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTIIVAKGSELEGQ-ECAVCKDEFAAGDKTRELPCQHSFHELCILPWVAERNTCPTCRHELPTDD 564
            GN GDYAFG+++ +I QLM  D NRHG PPA+K+ VE LP + + + +E++G  EC VCKD FA  D+   LPC+HSFH  CILPW+ + N+CP CR ELPTDD
Sbjct:  217 GNSGDYAFGNMANVINQLMQNDQNRHGAPPAAKEIVEQLPKVKITQ-NEVDGSAECTVCKDFFAVDDEVHRLPCEHSFHPDCILPWLKQHNSCPLCRFELPTDD 319          
BLAST of mRNA_Ecto-sp13_S_contig7677.18906.1 vs. uniprot
Match: A0A484DQN6_BRELC (RING-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQN6_BRELC)

HSP 1 Score: 129 bits (324), Expect = 4.700e-31
Identity = 59/122 (48.36%), Postives = 77/122 (63.11%), Query Frame = 0
Query:  443 IGMPGAMGGMGMXXXXXPGGNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTIIVAKGSELEGQECAVCKDEFAAGDKTRELPCQHSFHELCILPWVAERNTCPTCRHELPTDD 564
            +G+ GA+GG+          N GDYAFG+++ +I QLM  D NRHG PP SK+ ++ LP + + +       EC VCKD FA GD    LPC+H FH  CILPW+ + N+CP CR ELPTDD
Sbjct:   43 VGILGALGGV----IPMFNSNPGDYAFGNMANVINQLMQNDPNRHGAPPTSKETIDKLPKVKITQIEVENCAECPVCKDSFAVGDDVHRLPCEHLFHPDCILPWLKQHNSCPLCRFELPTDD 160          
BLAST of mRNA_Ecto-sp13_S_contig7677.18906.1 vs. uniprot
Match: A0A024G705_9STRA (RING-type domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G705_9STRA)

HSP 1 Score: 132 bits (331), Expect = 5.200e-31
Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 0
Query:  462 GNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTIIVAKGSELEGQECAVCKDEFAAGDKTRELPCQHSFHELCILPWVAERNTCPTCRHELPTDDS 565
            GN GDY  G+LS +I QLM  D+NRHG PPA+K+ +E LP + + +       ECAVCKDEF   ++ R +PC H+FH  CILPW+ + N+CP CR+ELPTDD+
Sbjct:  138 GNPGDYVVGNLSTVINQLMQNDSNRHGTPPAAKEAIEKLPMLAITQEDININPECAVCKDEFNLAEEARRMPCTHTFHPDCILPWLKQHNSCPICRYELPTDDA 241          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7677.18906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIQ8_9PHAE2.570e-12860.53RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FYE5_ECTSI2.360e-9665.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D0MY65_PHYIT2.740e-3255.34RING-type E3 ubiquitin transferase n=3 Tax=Phytoph... [more]
M4BXL0_HYAAE2.890e-3256.73RING-type domain-containing protein n=1 Tax=Hyalop... [more]
A0A067CFN4_SAPPC4.290e-3250.00RING-type domain-containing protein n=2 Tax=Saprol... [more]
A0A329S505_9STRA8.190e-3256.73RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]
A0A3R7G1L0_9STRA1.190e-3156.31RING-type E3 ubiquitin transferase n=3 Tax=Phytoph... [more]
A0A3R7W2Z9_9STRA3.250e-3156.73RING-type E3 ubiquitin transferase n=2 Tax=Peronos... [more]
A0A484DQN6_BRELC4.700e-3148.36RING-type domain-containing protein n=1 Tax=Bremia... [more]
A0A024G705_9STRA5.200e-3152.88RING-type domain-containing protein n=1 Tax=Albugo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 516..556
e-value: 2.0E-8
score: 44.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 515..557
e-value: 2.8E-12
score: 46.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 516..557
score: 12.43
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 479..563
e-value: 1.2E-20
score: 74.9
NoneNo IPR availablePANTHERPTHR15710:SF75E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKEcoord: 456..602
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 456..602
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 496..563

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7677contigEcto-sp13_S_contig7677:1215..7205 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7677.18906.1mRNA_Ecto-sp13_S_contig7677.18906.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7677 1215..7231 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7677.18906.1 ID=prot_Ecto-sp13_S_contig7677.18906.1|Name=mRNA_Ecto-sp13_S_contig7677.18906.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=649bp
MEASSSESTTVYFCHVCMSRVRVRKTSTEELECRRCEQTFVEELLESVVG
NAALGGIADDDDAAAAAGGDNDDGPASPHTTAAAGAGRRGTRGGGGGGGG
GGTPGQGVPVIGMPFSMLQALGVGGMHPLNARPATPGGDRGEGDGGEQQG
SAAGGGGGGGGAEGGRAGPFLFGGRFAMGSGGSGSGNTAGSGSGGGGGGG
GRGGSSFSSRVQRFRQGSGSSTSTSRTNSNNSSSSSSGGGGGGDVGGSRS
GARRGSGSAAAAAAAWPGASMNPEHNASNGGPPPQIANSVEQFLEQVLGG
GMVQMPGGMMQGGMVHFGGGGPVPAEGRIAGRGGQGQAAAAGAGGQGGGG
GQGSGGGGGGLDAENPFLGTLLQALGGAGAEHAEIFIGPNMQRMSGAARG
GGGDDARGAGGGGAGGGAPDFAGGGIGAMLSGPGGLGFLLRGIGMPGAMG
GMGMGLGMGPGGNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENL
PTIIVAKGSELEGQECAVCKDEFAAGDKTRELPCQHSFHELCILPWVAER
NTCPTCRHELPTDDSSSGSGNNNNDNSNGDSGHGANAGGGGSQDGGGGGR
NTDSRANSTSSSSSPSSSSSSSAPPFASGSSARWTAASSGSSQTGTER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD