prot_Ecto-sp13_S_contig7672.18903.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7672.18903.1
Unique Nameprot_Ecto-sp13_S_contig7672.18903.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length285
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7672.18903.1 vs. uniprot
Match: A0A6H5JWA9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWA9_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 1.200e-139
Identity = 250/290 (86.21%), Postives = 259/290 (89.31%), Query Frame = 0 
Query:    1 MSAREGWEGESRVIYQDVGARVSRLQARRAAAYFAGRKRESEEHVVDNSGGDENIGSXXXXXXXXXXXXXXXXXXXNALGSSGKRFVSLMFDPPGRYNEARHRLPEAFAIDAIGKERRMPYYGLDIGPLDVGSVIVLRGAPRGEHLAAYLVGEEEHQVFIVGNGVACAPTLLGDGFLRDREATDASPESGPGGRGXXXXXXXXXXXXXIS-----NGDDARRNPSAGKTPFSSPPDSGSRSQAENFERAAHIRGEALRELVGIGGGGAGGTSNGXSGEAGGATAHELFRQ 285
            MSAREGWEGESRVIY+DVGARVSRLQARRAAAYFAGRKRESE+HV  N+GGD++IGS  XXXXXXXXXXX      NALGSSGKRFVSLMFDPPGRYNEARH+LPEAF +DA GKERRMPYYGLDIGPLDVGSVIVLRGAPRG+HLAAYLVGEEEHQVFIVGNGVACAPTLLGDGFLRDREATDAS ESG G   XXXXXXXXXXXXX       NGDDARR PSAGKT  SS PDSGSRSQA+N ERAAHIRGEALRELVGIGGGGAGGTSNG SGEA GATAHELFRQ
Sbjct:    1 MSAREGWEGESRVIYEDVGARVSRLQARRAAAYFAGRKRESEKHVAGNNGGDKDIGSGSXXXXXXXXXXXRSGRG-NALGSSGKRFVSLMFDPPGRYNEARHQLPEAFVVDATGKERRMPYYGLDIGPLDVGSVIVLRGAPRGQHLAAYLVGEEEHQVFIVGNGVACAPTLLGDGFLRDREATDASQESGRGXXXXXXXXXXXXXXXXXXXXXXXNGDDARRKPSAGKTRLSSSPDSGSRSQAKNLERAAHIRGEALRELVGIGGGGAGGTSNGGSGEARGATAHELFRQ 289
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BLAST of mRNA_Ecto-sp13_S_contig7672.18903.1 vs. uniprot
Match: D8LMU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU4_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 4.110e-56
Identity = 137/197 (69.54%), Postives = 139/197 (70.56%), Query Frame = 0 
Query:   90 MFDPPGRYNEARHRLPEAFAIDAIGKERRMPYYGLDIGPLDVGSVIVLRGAPRGEHLAAYLVGEEEHQVFIVGNGVACAPTLLGDGFLRDREATDASPESGPGGRGXXXXXXXXXXXXXISNG-DDARRNPSAGKTPFSSPPDSGSRSQAENFERAAHIRGEALRELVGIGGGGAGGTSNGXSGEAGGATAHELFRQ 285
            MFDPPGRYN ARHRLPEAF +DA GKERRMPYYGLDIGPLDVGSVIVLRGAPRGEHLAAYLVGEEEHQ                          D S ESG G   XXXXXXXXXXXXX     DDARRNPSAGK PFSS PDSGSRSQAEN ERAAHIRGEALRELVGIGG         X      A+AHELFRQ
Sbjct:    1 MFDPPGRYNGARHRLPEAFVLDATGKERRMPYYGLDIGPLDVGSVIVLRGAPRGEHLAAYLVGEEEHQ------------------------GADGSQESGRGXXXXXXXXXXXXXXXXXXXXXDDARRNPSAGKPPFSSSPDSGSRSQAENLERAAHIRGEALRELVGIGGXXXXXXXXXXXXXXXXASAHELFRQ 173
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7672.18903.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWA9_9PHAE1.200e-13986.21Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LMU4_ECTSI4.110e-5669.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7672contigEcto-sp13_S_contig7672:1610..3151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7672.18903.1mRNA_Ecto-sp13_S_contig7672.18903.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7672 1610..4963 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7672.18903.1 ID=prot_Ecto-sp13_S_contig7672.18903.1|Name=mRNA_Ecto-sp13_S_contig7672.18903.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=285bp
MSAREGWEGESRVIYQDVGARVSRLQARRAAAYFAGRKRESEEHVVDNSG
GDENIGSGSGGGGDGDGGGGSGGGSGNALGSSGKRFVSLMFDPPGRYNEA
RHRLPEAFAIDAIGKERRMPYYGLDIGPLDVGSVIVLRGAPRGEHLAAYL
VGEEEHQVFIVGNGVACAPTLLGDGFLRDREATDASPESGPGGRGGGAGS
SLGGGGGGISNGDDARRNPSAGKTPFSSPPDSGSRSQAENFERAAHIRGE
ALRELVGIGGGGAGGTSNGGSGEAGGATAHELFRQ
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