prot_Ecto-sp13_S_contig767.18898.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig767.18898.1
Unique Nameprot_Ecto-sp13_S_contig767.18898.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length165
Homology
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BLAST of mRNA_Ecto-sp13_S_contig767.18898.1 vs. uniprot
Match: D8LLF8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLF8_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 3.420e-109
Identity = 148/164 (90.24%), Postives = 157/164 (95.73%), Query Frame = 0 
Query:    1 MGFFSCLGLGRRAAPRRRPVSRDNDRAAPGTPAGSPPATVNQWTEYRDAAGRPWWRSNLTGMWTDMKPHGNNNNHNMVFPFVQPPQQQVWPVGPIPGRFPQPPPWVVPAGPVVVVPMKPASPKKKEEAKDDKRGHWEEFVSDEGGKKFWRHTGTEKIRNSDPFT 164
            MGF SCLGLGRRAAPRRRPVSRDND AAPGTPAGSPPAT NQWTE+RDAAGRPWWRSNLTGMWTD+KPH NNNNHN+VFPF+QPPQQQVWPVGPIPGRFPQPPPWVVPAGPVVVVP+KPASPKK+EE KDDK+G WEEF+SDE GKKFWRHTGT+KIRNSDPFT
Sbjct:    1 MGFLSCLGLGRRAAPRRRPVSRDNDAAAPGTPAGSPPATANQWTEFRDAAGRPWWRSNLTGMWTDIKPHVNNNNHNVVFPFMQPPQQQVWPVGPIPGRFPQPPPWVVPAGPVVVVPVKPASPKKEEE-KDDKKGRWEEFISDEDGKKFWRHTGTKKIRNSDPFT 163
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig767.18898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LLF8_ECTSI3.420e-10990.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig767contigEcto-sp13_S_contig767:5138..6609 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig767.18898.1mRNA_Ecto-sp13_S_contig767.18898.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig767 4818..6690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig767.18898.1 ID=prot_Ecto-sp13_S_contig767.18898.1|Name=mRNA_Ecto-sp13_S_contig767.18898.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=165bp
MGFFSCLGLGRRAAPRRRPVSRDNDRAAPGTPAGSPPATVNQWTEYRDAA
GRPWWRSNLTGMWTDMKPHGNNNNHNMVFPFVQPPQQQVWPVGPIPGRFP
QPPPWVVPAGPVVVVPMKPASPKKKEEAKDDKRGHWEEFVSDEGGKKFWR
HTGTEKIRNSDPFT*
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