prot_Ecto-sp13_S_contig7668.18897.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7668.18897.1
Unique Nameprot_Ecto-sp13_S_contig7668.18897.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length178
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7668.18897.1 vs. uniprot
Match: A0A6H5JTN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTN6_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 1.110e-29
Identity = 76/202 (37.62%), Postives = 92/202 (45.54%), Query Frame = 0 
Query:   39 VPERHLTLIATREVDGVRQSFMNEEIMAASAHMGLDCITTVEGVRLVVGDTEMVDVPAFGSSPLPCRIASLFWQNKHSSSXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------SGHLVVRVSPFLGREHMPQEIKNKRRADDDDLSSVWEVTN 178
            VP+ H T IATRE DG R  FM+ +IM ASAHMGL+C+ T +GVRL+VGDT MV +PAFG+SP PCRIA++FWQN                                                                                       +GHLVVRV+PF+ R  MP  IK+KRR D D + SVWEVTN
Sbjct:   25 VPDFHFTPIATRESDGARGGFMSGDIMMASAHMGLECVATTDGVRLMVGDTAMVRLPAFGNSPHPCRIAAIFWQNTRKQRRRALELSGGNGGGVCRWFQALDTIDEEDEDAGSSPSSTXXGASWQXXXXXXXXXXXXXXXXXXXXXXXXETQQGRPGGGVQSTGHLVVRVNPFVFRSDMPDGIKSKRRRDQD-VESVWEVTN 225
[Close]
BLAST of mRNA_Ecto-sp13_S_contig7668.18897.1 vs. uniprot
Match: A0A6H5JE27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE27_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 4.340e-29
Identity = 81/236 (34.32%), Postives = 105/236 (44.49%), Query Frame = 0 
Query:    5 PGSSAELESPRVVEEIMMNLGGKQMSHAEHVRSRVPERHLTLIATREVDGVRQSFMNEEIMAASAHMGLDCITTVEGVRLVVGDTEMVDVPAFGSSPLPCRIASLFWQNKHSSSXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------SGHLVVRVSPFLGREHMPQEIKNKRRADDDDLSSVWEVTN 178
            P SS  L S       ++ +  +++   +   + VP+ H T IATRE DG R  FM+ +IM ASAHMGL+C+ T +GVRL+VGDT MV +PAFG+SP PCRIA++FWQN                                                                                       +GHLVVRV+PF+ R  MP  IK+KRR D D + SVWEVTN
Sbjct:  208 PESSEHLVSRMRRRLPLLPVVRREVKGKDDKAAEVPDFHFTPIATRESDGARGGFMSGDIMMASAHMGLECVATTDGVRLMVGDTAMVRLPAFGNSPHPCRIAAIFWQNTRKQRRRALELSGGNGGGVCRWFQALDTIDEEDEDAGSSPSSTXXGASWQXXXXXXXXXXXXXXXXXXXXXXXXETQQGRPGGGVQSTGHLVVRVNPFVFRSDMPDGIKSKRRRDQD-VESVWEVTN 442
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7668.18897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTN6_9PHAE1.110e-2937.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JE27_9PHAE4.340e-2934.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7668contigEcto-sp13_S_contig7668:6817..7350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7668.18897.1mRNA_Ecto-sp13_S_contig7668.18897.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7668 6355..7350 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7668.18897.1 ID=prot_Ecto-sp13_S_contig7668.18897.1|Name=mRNA_Ecto-sp13_S_contig7668.18897.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=178bp
MLVQPGSSAELESPRVVEEIMMNLGGKQMSHAEHVRSRVPERHLTLIATR
EVDGVRQSFMNEEIMAASAHMGLDCITTVEGVRLVVGDTEMVDVPAFGSS
PLPCRIASLFWQNKHSSSTSREETMRGGDEEEEKEEEESGHLVVRVSPFL
GREHMPQEIKNKRRADDDDLSSVWEVTN
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