prot_Ecto-sp13_S_contig7666.18895.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7666.18895.1
Unique Nameprot_Ecto-sp13_S_contig7666.18895.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length52
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7666.18895.1 vs. uniprot
Match: D8LTD6_ECTSI (Protein kinase domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD6_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 1.720e-22
Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0 
Query:    1 MSWLEGSPRHQGSKAKPAPGSSARGLWSSSTTRTYGSSRRPTSSLRGSAASG 52
            MSWLEGSP+HQGSKAKPAPGSSARGLWSSSTTRTYGSSRRPTSSLRGSAASG
Sbjct:    1 MSWLEGSPKHQGSKAKPAPGSSARGLWSSSTTRTYGSSRRPTSSLRGSAASG 52
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7666.18895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTD6_ECTSI1.720e-2298.08Protein kinase domain-containing protein (Fragment... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7666contigEcto-sp13_S_contig7666:2243..3799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7666.18895.1mRNA_Ecto-sp13_S_contig7666.18895.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7666 2022..3799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7666.18895.1 ID=prot_Ecto-sp13_S_contig7666.18895.1|Name=mRNA_Ecto-sp13_S_contig7666.18895.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=52bp
MSWLEGSPRHQGSKAKPAPGSSARGLWSSSTTRTYGSSRRPTSSLRGSAA
SG
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