mRNA_Ecto-sp13_S_contig7653.18877.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7653.18877.1 vs. uniprot
Match: A0A6H5JRN4_9PHAE (NYN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN4_9PHAE) HSP 1 Score: 337 bits (865), Expect = 2.630e-109 Identity = 172/192 (89.58%), Postives = 176/192 (91.67%), Query Frame = 1
Query: 196 MMAANEQGLQGNAACERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSGSSRXXXXXXXXXXXXXXDRSTNTGATAT 771
MMAA+EQG+QGNAA ERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRGPDIQWV+LATGDSDFGPVFRRLRELGKGV+GVGPSSVLSSSVALSCHEFIFTDDS SSR DRSTNTGATAT
Sbjct: 1 MMAADEQGVQGNAAGERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRGPDIQWVVLATGDSDFGPVFRRLRELGKGVIGVGPSSVLSSSVALSCHEFIFTDDSNSSRSGSANKGRRKGGKGDRSTNTGATAT 192
BLAST of mRNA_Ecto-sp13_S_contig7653.18877.1 vs. uniprot
Match: D8LAX9_ECTSI (NYN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX9_ECTSI) HSP 1 Score: 213 bits (541), Expect = 4.880e-64 Identity = 106/109 (97.25%), Postives = 107/109 (98.17%), Query Frame = 1
Query: 196 MMAANEQGLQGNAACERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRGP 522
MMAANEQG+QGNAA ERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCR P
Sbjct: 1 MMAANEQGVQGNAAGERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRTP 109
BLAST of mRNA_Ecto-sp13_S_contig7653.18877.1 vs. uniprot
Match: A0A6H9GN88_MICAE (HTH OST-type domain-containing protein n=5 Tax=Microcystis aeruginosa TaxID=1126 RepID=A0A6H9GN88_MICAE) HSP 1 Score: 170 bits (431), Expect = 4.190e-47 Identity = 88/149 (59.06%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 250 QRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSGSS 693
++V +F+DVEN+ GWLK G LL +A ELG V +RRA+GDFS A+V+ RQ EL GF+ VH HP KGK NSADI + +DVME R PD++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V SC+ FI+ D+ +S
Sbjct: 3 EKVAIFLDVENLSGWLKADGGEALLERANELGRVVVRRAYGDFSIASVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARIPDLEWVVLATGDSDFSPLFRRLRELGKSVVGVGPRSALSEAVKKSCNRFIYIDEELTS 150
BLAST of mRNA_Ecto-sp13_S_contig7653.18877.1 vs. uniprot
Match: B4VU65_9CYAN (HTH OST-type domain-containing protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VU65_9CYAN) HSP 1 Score: 170 bits (430), Expect = 5.500e-47 Identity = 87/149 (58.39%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 250 QRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSGSS 693
++V +F+DVEN+ GWLK G LL +A ELG V +RRA+GDFS A+V+ RQ EL GF+ VH HP KGK NSADI + +DVME R PD++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V SC+ FI+ D+ ++
Sbjct: 3 EKVAIFLDVENLSGWLKVDGGEALLERANELGRVVVRRAYGDFSIASVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARIPDLEWVVLATGDSDFSPLFRRLRELGKSVVGVGPRSALSEAVKKSCNRFIYIDEESTT 150
BLAST of mRNA_Ecto-sp13_S_contig7653.18877.1 vs. uniprot
Match: K9F5K4_9CYAN (HTH OST-type domain-containing protein n=1 Tax=Leptolyngbya sp. PCC 7375 TaxID=102129 RepID=K9F5K4_9CYAN) HSP 1 Score: 168 bits (425), Expect = 3.220e-46 Identity = 85/147 (57.82%), Postives = 108/147 (73.47%), Query Frame = 1
Query: 253 RVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSGS 690
+V +F+DVEN+ GWLK G LL +A ELG V +RRA+GDFS ++++RQ EL GF+ VH HP KGK NSADI + +DVME R PD++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V SC+ FI+ D+ +
Sbjct: 4 KVAIFLDVENLSGWLKADGGESLLDRANELGRVVVRRAYGDFSIPSISARQIELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYIARIPDLEWVILATGDSDFSPLFRRLRELGKSVVGVGPQSALSEAVKKSCNRFIYIDEKST 149
BLAST of mRNA_Ecto-sp13_S_contig7653.18877.1 vs. uniprot
Match: A0A1C0V8K5_9CYAN (HTH OST-type domain-containing protein n=3 Tax=unclassified Limnothrix TaxID=2632864 RepID=A0A1C0V8K5_9CYAN) HSP 1 Score: 168 bits (425), Expect = 3.440e-46 Identity = 86/147 (58.50%), Postives = 107/147 (72.79%), Query Frame = 1
Query: 253 RVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSGS 690
+V +F+DVEN+ GWLK G LL +A ELG V +RRA+GDFS +V+ RQ EL GF+ VH HP KGK NSADI + +DVME R PD++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V SC+ FI+ D+ +
Sbjct: 4 KVAIFLDVENLSGWLKADGGETLLERANELGRVVVRRAYGDFSIQSVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARVPDLEWVVLATGDSDFSPLFRRLRELGKSVVGVGPRSALSEAVKKSCNRFIYIDEEST 149
BLAST of mRNA_Ecto-sp13_S_contig7653.18877.1 vs. uniprot
Match: A0A2W7ACP4_9CYAN (HTH OST-type domain-containing protein n=1 Tax=Leptolyngbya sp. TaxID=47254 RepID=A0A2W7ACP4_9CYAN) HSP 1 Score: 168 bits (425), Expect = 4.170e-46 Identity = 86/148 (58.11%), Postives = 108/148 (72.97%), Query Frame = 1
Query: 253 RVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSGSS 693
+V +F+DVEN+ GWLK G LL +A ELG V +RRA+GDFS V +RQ EL GF+ VH HPAKGK NSADI + +DVME R PD++W++LATGDSDF P+FRRLRE+GK VVGVGP SVLS +V SC+ FI+ ++ S
Sbjct: 4 KVAIFLDVENLSGWLKSDGGEALLERANELGRVVVRRAYGDFSIPAVIARQTELNLLGFEFVHVYHPAKGK-NSADIQIVVDVMEYLARIPDLEWIVLATGDSDFSPLFRRLREMGKSVVGVGPRSVLSEAVKKSCNRFIYINEKQES 150
BLAST of mRNA_Ecto-sp13_S_contig7653.18877.1 vs. uniprot
Match: UPI0017466E78 (NYN domain-containing protein n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI0017466E78) HSP 1 Score: 167 bits (423), Expect = 5.940e-46 Identity = 87/149 (58.39%), Postives = 107/149 (71.81%), Query Frame = 1
Query: 250 QRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESC-RGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDDSGSS 693
++V +F+DVEN+ GWLK G LL A ELG V +RRA+GDFSN V+ RQ EL GF+ V HP KGK NSADI + +DVME R PD++W++LATGDSDF P+FRRLREL K VVGVGP SVLS +V SC +FI+ D+ SS
Sbjct: 3 EKVAIFLDVENLSGWLKADGGATLLEHASELGRVVVRRAYGDFSNPAVSVRQPELNLLGFEFVQVYHPVKGK-NSADIQIVVDVMEYLTRIPDLEWIVLATGDSDFSPLFRRLRELDKSVVGVGPRSVLSEAVKKSCSQFIYIDEGFSS 150
BLAST of mRNA_Ecto-sp13_S_contig7653.18877.1 vs. uniprot
Match: K9ZNR7_ANACC (Uncharacterized protein n=2 Tax=Anabaena TaxID=1163 RepID=K9ZNR7_ANACC) HSP 1 Score: 167 bits (422), Expect = 1.150e-45 Identity = 84/143 (58.74%), Postives = 105/143 (73.43%), Query Frame = 1
Query: 253 RVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESC-RGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTD 678
+VG+F+D+EN+ GWLK G LL +A ELG V +RRA+GDFS +V+ RQ EL GF+ VH HP KGK NSADI + +DVME R PD+QW +LATGD+DF P+FRRL+ELGK VVG+GP S LS V SC+ FI+TD
Sbjct: 4 KVGIFLDIENLAGWLKLDGGETLLDRASELGSVVVRRAYGDFSLPSVSKRQSELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLTRVPDLQWFVLATGDADFSPLFRRLKELGKSVVGIGPKSKLSEVVKKSCNRFIYTD 145
BLAST of mRNA_Ecto-sp13_S_contig7653.18877.1 vs. uniprot
Match: UPI00168003E0 (NYN domain-containing protein n=1 Tax=Leptolyngbya sp. FACHB-36 TaxID=2692808 RepID=UPI00168003E0) HSP 1 Score: 166 bits (419), Expect = 2.470e-45 Identity = 84/145 (57.93%), Postives = 107/145 (73.79%), Query Frame = 1
Query: 250 QRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVALSCHEFIFTDD 681
++V +F+DVEN+ GWLK G LL +A ELG V +RRA+GDFS +V+ RQ EL GF+ VH HP KGK NSADI + +DVME R PD++WV+LATGDSDF P+FRRLRELGK V+GVGP S LS +V +C+ FI+ D+
Sbjct: 3 EKVAIFLDVENLSGWLKADGGETLLERANELGRVVVRRAYGDFSILSVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARIPDLEWVVLATGDSDFSPLFRRLRELGKSVMGVGPRSALSEAVKRTCNRFIYIDE 146 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7653.18877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7653.18877.1 >prot_Ecto-sp13_S_contig7653.18877.1 ID=prot_Ecto-sp13_S_contig7653.18877.1|Name=mRNA_Ecto-sp13_S_contig7653.18877.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=192bp MMAANEQGLQGNAACERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGback to top mRNA from alignment at Ecto-sp13_S_contig7653:688..3192- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7653.18877.1 ID=mRNA_Ecto-sp13_S_contig7653.18877.1|Name=mRNA_Ecto-sp13_S_contig7653.18877.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2505bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7653:688..3192- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7653:688..3192- >mRNA_Ecto-sp13_S_contig7653.18877.1 ID=mRNA_Ecto-sp13_S_contig7653.18877.1|Name=mRNA_Ecto-sp13_S_contig7653.18877.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=576bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7653:688..3192- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |