prot_Ecto-sp13_S_contig7651.18872.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7651.18872.1
Unique Nameprot_Ecto-sp13_S_contig7651.18872.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length230
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7651.18872.1 vs. uniprot
Match: A0A6H5JGY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY4_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 2.620e-94
Identity = 166/229 (72.49%), Postives = 171/229 (74.67%), Query Frame = 0 
Query:    1 MGSVHGALPPLERNRRCRPQDEFGSSGENVPAASSIMPGGLDALSDLHTKLAHIQWRRHANDKSIRKALETTKRLQERDMMLQLSVDREGERARWTEAIVRDELARPVEISEMFLKDWEQREGEIRKRQLKETKLHLKSLKRVERTVASKKRSAITVQRPESRNAEGRGGGGERALERQEDDEALKERLRRLRFGVKEKRRELRRSASYSKDHIGTFSATDFKTGRGRC 229
            MGSV+ ALPPLE NRRCRPQDEFGSS ENVP  S I+ G  DALSDLHTKLAHIQWRRHANDKSIRKALETTKRLQERDMMLQLSVDREGE                                         TKLHLKSLKRVERTV SKK SAIT QRPESR+AEGRGG GERALE+QEDDEALKERLRR+R GVKEKRRELRRSASYSKD  GTFSAT FKTGRGRC
Sbjct:    1 MGSVYRALPPLEGNRRCRPQDEFGSSRENVPPRSIIVSGSGDALSDLHTKLAHIQWRRHANDKSIRKALETTKRLQERDMMLQLSVDREGE-----------------------------------------TKLHLKSLKRVERTVTSKKCSAITAQRPESRDAEGRGG-GERALEQQEDDEALKERLRRVRVGVKEKRRELRRSASYSKDQRGTFSATGFKTGRGRC 187
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7651.18872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGY4_9PHAE2.620e-9472.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7651contigEcto-sp13_S_contig7651:5160..6883 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7651.18872.1mRNA_Ecto-sp13_S_contig7651.18872.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7651 5048..6974 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7651.18872.1 ID=prot_Ecto-sp13_S_contig7651.18872.1|Name=mRNA_Ecto-sp13_S_contig7651.18872.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=230bp
MGSVHGALPPLERNRRCRPQDEFGSSGENVPAASSIMPGGLDALSDLHTK
LAHIQWRRHANDKSIRKALETTKRLQERDMMLQLSVDREGERARWTEAIV
RDELARPVEISEMFLKDWEQREGEIRKRQLKETKLHLKSLKRVERTVASK
KRSAITVQRPESRNAEGRGGGGERALERQEDDEALKERLRRLRFGVKEKR
RELRRSASYSKDHIGTFSATDFKTGRGRC*
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