prot_Ecto-sp13_S_contig12240.1886.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12240.1886.1
Unique Nameprot_Ecto-sp13_S_contig12240.1886.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length464
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12240.1886.1 vs. uniprot
Match: D8LPR9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR9_ECTSI)

HSP 1 Score: 429 bits (1104), Expect = 1.730e-145
Identity = 293/419 (69.93%), Postives = 301/419 (71.84%), Query Frame = 0 
Query:   44 MPSARAVGPPPTVSSDVFEIVADGNADVLEDMIAFSGAQHMCELRSKKKEDYGRNLLHCAVASGQRLTLQVLLKHEAFDANQANETRLRQVDSVYTRSTPLMEAVKIGRLDLIESLVAAGARLDVQAGFFCRDDVNGDTVLHWAAREVSAAFLRQVLHLARKHGRTTQQMLAALQLKNNSGENAADVGANDVARESIRRLVSGEEAPGLPPKKHNSSSARTSQSGVKSNGRVSYAAAPEAGGEGGLRPSQSGPVGSSSAGLRSSQSGHTTGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHSSPGTPPGVVLGALTGGGGSTSPTPXXXXXXXXXXXGTAAVVGEGVARGQEGQPTKPLLLPKVKGVVKSYAAIVGPANAKKNEEGTV 462
            MPSARAVGPPPTVSSDVFEIVADGNADVLEDMIAFSGAQHMCELRSKKKEDYGRNLLHCAVASGQR TLQVLLKHEAFDAN        QVDSVYTRSTPLMEAVKIGRLDLIE ++AAGARL+VQ                                                 LKNNSGENAADVGANDVARESIRRLVSGEEAPGLPPKKHNSSS R SQSG+KSNGR  YAAAPEAGG GGLRPSQSGPVGSSS        GHTTGSXXXXXXXXXXXXXXXX              XXXXXXXXXXXX    XX          RHSSPGT PGV+LG LTGGGGST+PTP         XX     VGEGVARGQEGQPTKPLLLPKVKGVVKSYAAIVG A+AKKNEEG +
Sbjct:    1 MPSARAVGPPPTVSSDVFEIVADGNADVLEDMIAFSGAQHMCELRSKKKEDYGRNLLHCAVASGQRPTLQVLLKHEAFDAN--------QVDSVYTRSTPLMEAVKIGRLDLIECVIAAGARLNVQ-------------------------------------------------LKNNSGENAADVGANDVARESIRRLVSGEEAPGLPPKKHNSSSVRASQSGIKSNGRALYAAAPEAGGGGGLRPSQSGPVGSSSXXXXXXXXGHTTGSXXXXXXXXXXXXXXXXAGRNPETRNSQHQHXXXXXXXXXXXXPGSAXXSPTPQPAPLTRHSSPGTRPGVMLGVLTGGGGSTAPTPEGGMAVAMAXXXXXXXVGEGVARGQEGQPTKPLLLPKVKGVVKSYAAIVGAADAKKNEEGMI 362
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BLAST of mRNA_Ecto-sp13_S_contig12240.1886.1 vs. uniprot
Match: T0R332_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R332_SAPDV)

HSP 1 Score: 68.6 bits (166), Expect = 1.300e-8
Identity = 55/186 (29.57%), Postives = 89/186 (47.85%), Query Frame = 0 
Query:   59 DVFEIVADGNADVLEDMIAFSGAQHMCELRSKKKEDYGRNLLHCAVASGQRLTLQVLLKHEA-FDANQANETRLRQVDSVYTRSTPLMEAVKIGRLDLIESLVAAGARLDVQAGFFCRDDVNGDTVLHWAAREVSAAFLRQVLHLARKHGRTTQ-QMLAALQLKNNSGENAADVGANDVARESIRR 242
            D++     G  DVL+          +  L ++  ++  R LLH A  SG    ++ LL+  A  DA          VDSV +++TPL+EA + GRLD+++ L++ GA +  Q       D +GDT LHWAAR     +   V+H+ R   ++T   +   L ++N  G    +V       + IR+
Sbjct:  434 DIWSATKTGKLDVLQKYFLIESPAKLLVLHNRDVDEGRRTLLHTACWSGHVSVVEYLLRMGADVDA----------VDSVLSKTTPLIEAARAGRLDVVKLLLSEGACVSHQ-------DFHGDTPLHWAARR---GWNSLVMHMVRFTEQSTPGSVQRLLSIENYHGYICVEVAPTSYLSDIIRK 599
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BLAST of mRNA_Ecto-sp13_S_contig12240.1886.1 vs. uniprot
Match: A0A067BMU7_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BMU7_SAPPC)

HSP 1 Score: 65.1 bits (157), Expect = 9.250e-8
Identity = 47/147 (31.97%), Postives = 73/147 (49.66%), Query Frame = 0 
Query:   59 DVFEIVADGNADVLEDMIAFSGAQHMCELRSKKKEDYGRNLLHCAVASGQRLTLQVLLKHEA-FDANQANETRLRQVDSVYTRSTPLMEAVKIGRLDLIESLVAAGARLDVQAGFFCRDDVNGDTVLHWAAREVSAAFLRQVLHLAR 204
            D++     G  DVL+          +  L ++  ++  R LLH A   G    ++ LL+  A  DA          VDSV +++TPL+EA + GRLD+++ L++ GA +  Q       D +GDT LHWAAR     +   V+H+ R
Sbjct:  138 DIWAATKTGKLDVLQKYFLIESPAKLLVLHNRDVDEGRRTLLHTACWWGHVAVVEYLLRMGADVDA----------VDSVLSKTTPLIEAARAGRLDVVKLLLSEGACVSHQ-------DFHGDTPLHWAARR---GWNSLVMHMVR 264
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BLAST of mRNA_Ecto-sp13_S_contig12240.1886.1 vs. uniprot
Match: A0A1V9Z6V3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z6V3_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 4.570e-6
Identity = 45/146 (30.82%), Postives = 71/146 (48.63%), Query Frame = 0 
Query:   59 DVFEIVADGNADVLEDMIAFSGAQHMCELRSKKKEDYGRNLLHCAVASGQRLTLQVLLKHEAFDANQANETRLRQVDSVYTRSTPLMEAVKIGRLDLIESLVAAGARLDVQAGFFCRDDVNGDTVLHWAAREVSAAFLRQVLHLAR 204
            D++     G  +VL+          +  + +K  ++  R LLH A   G  L++  LL H   D +         VDSV  ++TPL+EA + GRL++++ L+  GA +  Q       D +GDT LHWAAR     +   V+H+ R
Sbjct:  411 DIWLATKAGKLEVLKKYFLVESPAKLLVMHNKDLDEGRRTLLHTACWWGH-LSIVELLVHLGADVD--------AVDSVLGKTTPLIEAARAGRLEIVKLLLDEGACVSHQ-------DCHGDTALHWAARR---GWNSLVMHMVR 537
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BLAST of mRNA_Ecto-sp13_S_contig12240.1886.1 vs. uniprot
Match: A0A485LJV1_9STRA (Aste57867_21814 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LJV1_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 3.320e-5
Identity = 37/131 (28.24%), Postives = 63/131 (48.09%), Query Frame = 0 
Query:   59 DVFEIVADGNADVLEDMIAFSGAQHMCELRSKKKEDYGRNLLHCAVASGQRLTLQVLLKHEAFDANQANETRLRQVDSVYTRSTPLMEAVKIGRLDLIESLVAAGARLDVQAGFFCRDDVNGDTVLHWAAR 189
            DV+    +G  DV+E  +   G+  +  L +K + +  R LLH A   G     +  ++  A          +  +D++++++TPL+EA + G   +   L+  GA L  Q       D +GDT +HWAAR
Sbjct:  457 DVWTATKEGKLDVVEKFMLVEGSTKLLSLHNKGQNEGRRTLLHTAAWWGHHEVAEYFVRLGA---------EVDAMDTIHSKTTPLIEAARGGHRSICRLLLDHGACLTHQ-------DAHGDTAVHWAAR 571
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12240.1886.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LPR9_ECTSI1.730e-14569.93Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
T0R332_SAPDV1.300e-829.57Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A067BMU7_SAPPC9.250e-831.97Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A1V9Z6V3_9STRA4.570e-630.82Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A485LJV1_9STRA3.320e-528.24Aste57867_21814 protein n=1 Tax=Aphanomyces stella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 95..125
e-value: 0.23
score: 20.5
coord: 139..168
e-value: 1.3
score: 18.0
coord: 179..208
e-value: 210.0
score: 10.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 139..171
score: 9.484
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 59..249
e-value: 1.5E-19
score: 72.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 91..192
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 72..169
e-value: 9.7E-7
score: 29.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 95..200
score: 13.045
NoneNo IPR availablePANTHERPTHR24161FAMILY NOT NAMEDcoord: 55..362

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12240contigEcto-sp13_S_contig12240:106..3018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12240.1886.1mRNA_Ecto-sp13_S_contig12240.1886.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12240 106..3071 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12240.1886.1 ID=prot_Ecto-sp13_S_contig12240.1886.1|Name=mRNA_Ecto-sp13_S_contig12240.1886.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=464bp
MRQSTSTQQSPRPTARRPTSSSQLGGRTSLGGKTARGASARSPMPSARAV
GPPPTVSSDVFEIVADGNADVLEDMIAFSGAQHMCELRSKKKEDYGRNLL
HCAVASGQRLTLQVLLKHEAFDANQANETRLRQVDSVYTRSTPLMEAVKI
GRLDLIESLVAAGARLDVQAGFFCRDDVNGDTVLHWAAREVSAAFLRQVL
HLARKHGRTTQQMLAALQLKNNSGENAADVGANDVARESIRRLVSGEEAP
GLPPKKHNSSSARTSQSGVKSNGRVSYAAAPEAGGEGGLRPSQSGPVGSS
SAGLRSSQSGHTTGSRPSQSGTPPGARSSQSAGRSPETRNSQHERHSQSQ
ATKRNHRPASAATSSTPQPAALTRHSSPGTPPGVVLGALTGGGGSTSPTP
GGGMAVAMAPGGTAAVVGEGVARGQEGQPTKPLLLPKVKGVVKSYAAIVG
PANAKKNEEGTVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom