mRNA_Ecto-sp13_S_contig76429.18859.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig76429.18859.1 vs. uniprot
Match: A0A6H5K2H7_9PHAE (DEP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2H7_9PHAE) HSP 1 Score: 173 bits (439), Expect = 9.410e-55 Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 1
Query: 1 IQEVANRMRRELEIVDRKYRLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHDRLED 261
I+EVANRMRRELEIVDRKYRLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHDRLED
Sbjct: 13 IKEVANRMRRELEIVDRKYRLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHDRLED 99
BLAST of mRNA_Ecto-sp13_S_contig76429.18859.1 vs. uniprot
Match: D7FIE7_ECTSI (DEP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE7_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 1.960e-20 Identity = 48/84 (57.14%), Postives = 57/84 (67.86%), Query Frame = 1
Query: 1 IQEVANRMRRELEIVDRKYRLRTYPSCFVGSDAVQWMIK-SGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHD 249
I+E+ ++M EL I DR YRLRTY CFVG DAVQW+IK S S A ALG+LL+D G F HVTR H F++ LFYRF D
Sbjct: 21 IKELGDKMHAELRITDRTYRLRTYKQCFVGKDAVQWLIKASSRVSSTEEAVALGNLLMDLGYFHHVTRDHPFQDSGLFYRFAED 104
BLAST of mRNA_Ecto-sp13_S_contig76429.18859.1 vs. uniprot
Match: A0A4Y6Q314_9DELT (FAD-containing oxidoreductase n=2 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6Q314_9DELT) HSP 1 Score: 91.7 bits (226), Expect = 1.120e-19 Identity = 42/81 (51.85%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 7 EVANRMRRELEIVDRKYRLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHD 249
E+ ++R +EI DR YRL TY CFVG +A WM+++G+A D+ AE +G+LL++ GVF HV R H FEN LFYRF D
Sbjct: 5 ELIEKLRENVEITDRTYRLETYEDCFVGEEACAWMVEAGVARDIEEAERIGNLLLEAGVFHHVLREHKFENDYLFYRFSSD 85
BLAST of mRNA_Ecto-sp13_S_contig76429.18859.1 vs. uniprot
Match: A0A0G4FLL1_VITBC (DEP domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FLL1_VITBC) HSP 1 Score: 84.0 bits (206), Expect = 5.720e-17 Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 1 IQEVANRMRRELEIVDRKYRLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHD 249
+Q++A+++R +LEI DR+Y L TY CF+GSDAV+W++ +G A V A +G L++D G+F HVTR H ++ LFYRF D
Sbjct: 21 VQDLADQIRAKLEIRDRRYHLTTYTKCFLGSDAVKWLMGNGHAETVEDALLVGQLMMDQGMFAHVTRDHSLKDESLFYRFALD 103
BLAST of mRNA_Ecto-sp13_S_contig76429.18859.1 vs. uniprot
Match: A0A388LFS9_CHABU (DEP domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LFS9_CHABU) HSP 1 Score: 82.8 bits (203), Expect = 1.470e-16 Identity = 43/84 (51.19%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 7 EVANRMRRELEIVDRKYRLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHDRLE 258
E+ ++R LEI DR Y L+TY SCFVGS+AV +MIKSG+ S LG+LL+ VF HV + H F+N LFYRF D E
Sbjct: 158 EITEKLRSGLEIKDRTYLLKTYKSCFVGSEAVAFMIKSGMVSSEEDGVHLGNLLMQQKVFHHVVKDHTFKNAYLFYRFAQDETE 241
BLAST of mRNA_Ecto-sp13_S_contig76429.18859.1 vs. uniprot
Match: F2U0W6_SALR5 (Mercuric reductase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U0W6_SALR5) HSP 1 Score: 82.4 bits (202), Expect = 1.990e-16 Identity = 39/77 (50.65%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 10 VANRMRRELEIVDRKYRLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRF 240
+ R+ + LE+ DR+YRL++Y +CFVGSDAV M+ SG+ + A LG++L+D G HV R H FEN+RLFYRF
Sbjct: 10 IVMRLEQGLEVKDRRYRLKSYKNCFVGSDAVALMMSSGITNTEEDAVLLGNVLLDAGYIAHVLREHRFENKRLFYRF 86
BLAST of mRNA_Ecto-sp13_S_contig76429.18859.1 vs. uniprot
Match: A0A7S3ZB25_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZB25_9EUKA) HSP 1 Score: 80.5 bits (197), Expect = 9.440e-16 Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 1
Query: 7 EVANRMRRELEIVDRKYRLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHD 249
++A+ MR ++E+ DR+Y L TY CFVGSDAVQ++I G A V AEALG+ L G HVTR H +N + FY F D
Sbjct: 27 DIASDMRSKIEVKDRQYHLHTYKKCFVGSDAVQYLIDEGFAESVEDAEALGEELTHSGEIVHVTRDHSLKNGKYFYYFKQD 107
BLAST of mRNA_Ecto-sp13_S_contig76429.18859.1 vs. uniprot
Match: A0A0D2X2F7_CAPO3 (Phosphoinositide phospholipase C n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X2F7_CAPO3) HSP 1 Score: 80.5 bits (197), Expect = 9.760e-16 Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 1
Query: 10 VANRMRRELEIVDRKYRLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRF 240
+A RM LE+ DRK+ LRTY CFVG++AV W++ G+A D A +G+L+I + +F HVT H+F+N LFYR+
Sbjct: 522 LAARMMSSLEVKDRKFLLRTYKDCFVGTEAVDWLLSRGVAEDEEDAVRIGNLMIKNNLFQHVTLDHLFKNENLFYRY 598
BLAST of mRNA_Ecto-sp13_S_contig76429.18859.1 vs. uniprot
Match: UPI001BBD1E47 (FAD-containing oxidoreductase n=2 Tax=Desulfosarcina cetonica TaxID=90730 RepID=UPI001BBD1E47) HSP 1 Score: 80.1 bits (196), Expect = 1.290e-15 Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 1 IQEVANRMRRELEIVDRKY--RLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRFMHD 249
++ + R++ ++ DR Y R RTYP CFVGS+AV +IK G+A DV A +G++L+D GVF HV H F+N +LFYRF+ D
Sbjct: 18 LESLTQRIKALFDVKDRTYGFRPRTYPKCFVGSEAVAQLIKKGIALDVEDAMHIGNMLLDAGVFHHVLDEHAFKNEKLFYRFISD 102
BLAST of mRNA_Ecto-sp13_S_contig76429.18859.1 vs. uniprot
Match: A0A7S1TCV4_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCV4_9RHOD) HSP 1 Score: 79.7 bits (195), Expect = 1.760e-15 Identity = 36/65 (55.38%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 46 DRKYRLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIDHGVFFHVTRRHMFENRRLFYRF 240
DRK++LR++PSCFVG +AVQW++ G A++ A LGD +I GVF HV R H F+N LFYRF
Sbjct: 27 DRKFKLRSFPSCFVGFEAVQWLVDHGFAANEEDAVRLGDSMIHAGVFHHVLREHSFKNENLFYRF 91 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig76429.18859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig76429.18859.1 >prot_Ecto-sp13_S_contig76429.18859.1 ID=prot_Ecto-sp13_S_contig76429.18859.1|Name=mRNA_Ecto-sp13_S_contig76429.18859.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp MRRELEIVDRKYRLRTYPSCFVGSDAVQWMIKSGLASDVAGAEALGDLLIback to top mRNA from alignment at Ecto-sp13_S_contig76429:2..613- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig76429.18859.1 ID=mRNA_Ecto-sp13_S_contig76429.18859.1|Name=mRNA_Ecto-sp13_S_contig76429.18859.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=612bp|location=Sequence derived from alignment at Ecto-sp13_S_contig76429:2..613- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig76429:2..613- >mRNA_Ecto-sp13_S_contig76429.18859.1 ID=mRNA_Ecto-sp13_S_contig76429.18859.1|Name=mRNA_Ecto-sp13_S_contig76429.18859.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=243bp|location=Sequence derived from alignment at Ecto-sp13_S_contig76429:2..613- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |