prot_Ecto-sp13_S_contig7632.18849.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7632.18849.1
Unique Nameprot_Ecto-sp13_S_contig7632.18849.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length119
Homology
BLAST of mRNA_Ecto-sp13_S_contig7632.18849.1 vs. uniprot
Match: D8LTZ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTZ4_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 5.160e-51
Identity = 92/93 (98.92%), Postives = 92/93 (98.92%), Query Frame = 0
Query:    1 MALSIVGLLFQRSRVVRKVIVADLKNFMNLAVGHDARHPLPGPPAAAVALREKALALMEEWNESHGDLYKGLRAAYRFLREGKRMKFPELQVR 93
            MALSIVGLLFQRSRVVRKVIVADLKNFMNLAVGHDARHPLPGPPAAAVALREKALALMEEWNESHGDLYKGLRAAYRFLREGKRMKFPELQ R
Sbjct:  148 MALSIVGLLFQRSRVVRKVIVADLKNFMNLAVGHDARHPLPGPPAAAVALREKALALMEEWNESHGDLYKGLRAAYRFLREGKRMKFPELQAR 240          
BLAST of mRNA_Ecto-sp13_S_contig7632.18849.1 vs. uniprot
Match: A0A383W5H2_TETOB (Uncharacterized protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W5H2_TETOB)

HSP 1 Score: 74.7 bits (182), Expect = 3.300e-13
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 0
Query:    1 MALSIVGLLFQRSRVVRKVIVADLKNFMNLAVGHDARHPLPGPPAAAVALREKALALMEEWNESHGDLYKGLRAAYRFLREGKRMKFPELQVR 93
            +A+ +  +LF RS+  R+V+      F+ L VGH    PLP P AAA ALRE++L ++E+W+E+ G  Y  + AAY++L+  K+ KFPE+  R
Sbjct:   64 LAVELCDVLFSRSKCFRRVLAGQFSQFVELGVGHKPDKPLPPPAAAAAALRERSLEVIEKWHEAWGLHYPQVTAAYKYLK--KQYKFPEISSR 154          
BLAST of mRNA_Ecto-sp13_S_contig7632.18849.1 vs. uniprot
Match: A0A7J7PNL4_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PNL4_9CHLO)

HSP 1 Score: 69.7 bits (169), Expect = 1.830e-11
Identity = 37/93 (39.78%), Postives = 60/93 (64.52%), Query Frame = 0
Query:    1 MALSIVGLLFQRSRVVRKVIVADLKNFMNLAVGHDARHPLPGPPAAAVALREKALALMEEWNESHGDLYKGLRAAYRFLREGKRMKFPELQVR 93
            +++ +  +LF RS+  R+ +      F+ L+VGH     LP P AAAVALRE+AL ++E+W+E+ G  +  + AAY++L+  K+ KFPE+  R
Sbjct:   64 LSVELCDVLFSRSKCFRRALAGQFSQFVELSVGHKPDKLLPPPAAAAVALRERALEVIEQWHEAWGLHHPQVTAAYKYLK--KQYKFPEISSR 154          
BLAST of mRNA_Ecto-sp13_S_contig7632.18849.1 vs. uniprot
Match: A0A5J4Y4J3_9CHLO (UV-stimulated scaffold A protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y4J3_9CHLO)

HSP 1 Score: 67.4 bits (163), Expect = 1.200e-10
Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 0
Query:    9 LFQRSRVVRKVIVADLKNFMNLAVGHDARHPLPGPPAAAVALREKALALMEEWNESHGDLYKGLRAAYRFLREGKRMKFPELQVR 93
            LFQRS+  R  + A    F+ L++G     PLPGP   A  LR++AL ++E+WN+  G  YK +   + +L+    M+FPE++ R
Sbjct:   76 LFQRSKAFRTHVTAHFTEFLELSLGFRHDKPLPGPANIANQLRDRALEIVEQWNDKFGSSYKQVALGFNYLKHNMAMRFPEVRAR 160          
BLAST of mRNA_Ecto-sp13_S_contig7632.18849.1 vs. uniprot
Match: A0A6P7UCD8_IXOSC (UV-stimulated scaffold protein A-like isoform X1 n=4 Tax=Ixodes TaxID=6944 RepID=A0A6P7UCD8_IXOSC)

HSP 1 Score: 55.1 bits (131), Expect = 2.390e-6
Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 0
Query:    9 LFQRSRVVRKVIVADLKNFMNLAVGHDARHPLPGPPAAAVALREKALALMEEWNESHGDLYKGLRAAYRFLREGK 83
            LF+RS + R +++   + FM L    +   PLPG  AAA  L+EK+LA+++EW+E  G  YK L     FL+  K
Sbjct:   78 LFKRSHLFRTLLLEHFEKFMELVAETNLDLPLPGSEAAARNLKEKSLAVIDEWHEKFGANYKLLSLGVNFLKNRK 152          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7632.18849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LTZ4_ECTSI5.160e-5198.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A383W5H2_TETOB3.300e-1341.94Uncharacterized protein n=2 Tax=Tetradesmus obliqu... [more]
A0A7J7PNL4_9CHLO1.830e-1139.78Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
A0A5J4Y4J3_9CHLO1.200e-1037.65UV-stimulated scaffold A protein n=1 Tax=Trebouxia... [more]
A0A6P7UCD8_IXOSC2.390e-640.00UV-stimulated scaffold protein A-like isoform X1 n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018610UV-stimulated scaffold protein APANTHERPTHR28670FAMILY NOT NAMEDcoord: 2..112
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..119
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7632contigEcto-sp13_S_contig7632:8..648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7632.18849.1mRNA_Ecto-sp13_S_contig7632.18849.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7632 8..657 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7632.18849.1 ID=prot_Ecto-sp13_S_contig7632.18849.1|Name=mRNA_Ecto-sp13_S_contig7632.18849.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=119bp
MALSIVGLLFQRSRVVRKVIVADLKNFMNLAVGHDARHPLPGPPAAAVAL
REKALALMEEWNESHGDLYKGLRAAYRFLREGKRMKFPELQVRQIDRQRK
TERQTDRRMERNVSETGRQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018610UVSSA