mRNA_Ecto-sp13_S_contig7630.18848.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A6H5JGV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV1_9PHAE) HSP 1 Score: 519 bits (1337), Expect = 5.050e-185 Identity = 259/271 (95.57%), Postives = 263/271 (97.05%), Query Frame = 1
Query: 1 MMARRQQAYQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITYR 813
MMARR QAYQS NGEDSMEALS KLSADLRGNIRALGAFPLLSDEWCKMATALGRIA+ISEAEA+LTQDCIEGERK+GERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGG QAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDM LRGDLAGRQEIVCLSYLRGLVS LSDYEEGRVMPHLRGA T+SCLAAMLHANHRHLGMEAAAVGAEALAFVC TEDFITYR
Sbjct: 2 MMARRPQAYQSNNGEDSMEALSTKLSADLRGNIRALGAFPLLSDEWCKMATALGRIAEISEAEARLTQDCIEGERKEGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGGQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMSLRGDLAGRQEIVCLSYLRGLVSCLSDYEEGRVMPHLRGAETVSCLAAMLHANHRHLGMEAAAVGAEALAFVCGTEDFITYR 272
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: D7G0I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I2_ECTSI) HSP 1 Score: 447 bits (1151), Expect = 6.500e-157 Identity = 232/271 (85.61%), Postives = 236/271 (87.08%), Query Frame = 1
Query: 1 MMARRQQAYQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITYR 813
MMARR AY SKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIA+ISEAE EMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGG QAGEDGPLVLESL+SFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNP AVEDM LRGDLAGRQEIVCLSYLRGLVSRLSD+EEGRVMPHLRGAGT+SCLAAMLHANHRHLGMEAAAVGAEALAFVC TEDFITYR
Sbjct: 1 MMARRLHAYHSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIAEISEAE----------------------------EMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGGQAGEDGPLVLESLNSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPDAVEDMSLRGDLAGRQEIVCLSYLRGLVSRLSDHEEGRVMPHLRGAGTVSCLAAMLHANHRHLGMEAAAVGAEALAFVCGTEDFITYR 243
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A7S2V4C5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4C5_9STRA) HSP 1 Score: 226 bits (575), Expect = 1.460e-69 Identity = 123/263 (46.77%), Postives = 163/263 (61.98%), Query Frame = 1
Query: 25 YQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITYR 813
Y SK +D + ALS LS DLR IRALG+FP+LSD W MA GRIA+IS+ E+KL +D TLWE EE+ALRY+LEDGKLN+CLRNL E++ F R R+ D + LD+FEKG+G VLRNAW HVEA+QTTD+PLL+ Y+ V DA NP +E G+L RQE+V + YL L++++ + E RVMP ++ S L +++HA+H L +AL+ +CDTEDF TY+
Sbjct: 7 YMSKCDDDDIFALSKTLSNDLRTAIRALGSFPVLSDSWNGMADTFGRIANISDMESKLPKDSENA------------TLWECEELALRYLLEDGKLNLCLRNLVEFKNFERELRNAPATLPTD---HRDKLDAFEKGLGCVLRNAWRHVEAIQTTDLPLLINYIGDVMEDAVRNPTRLESFQKAGELEKRQEVVVIYYLASLMTQVDEVSEDRVMPLIKERRLFSLLVSVMHAHHAKLNEGDLLAALKALSLICDTEDFSTYK 254
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A1V9ZS11_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS11_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.410e-59 Identity = 117/262 (44.66%), Postives = 156/262 (59.54%), Query Frame = 1
Query: 25 YQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITY 810
Y+ + D +E LSAKL+ADLR +IR LG +P+LS+EW +MA + R +ISE E KL K TLWE EE+ALRY+LEDGKLN+CLR L +++++ RN G D E L+L+ FE+G+G +L+NAW HVEALQTTD+PLLVEY+ V + P + DL QE++ L YL+GL RL D E R+MP ++ + L NHR L E V A+ LA +CDTEDF T+
Sbjct: 7 YEKSSDADGIEKLSAKLTADLRSHIRFLGDYPILSEEWKEMANNMTRFGEISEMERKLP-------------KQENATLWECEELALRYILEDGKLNLCLRLLVDYKEYERNTI-GRDFDAEAKELLLK----FERGLGVMLKNAWLHVEALQTTDLPLLVEYIATVLTFCHEEPEFFKSK----DLEDSQEVIVLYYLQGLFKRLEDIGESRIMPLVQERQIFELVLWHLQHNHRSLSPEDTLVAADVLAQICDTEDFQTH 246
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A835YQR7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQR7_9STRA) HSP 1 Score: 197 bits (501), Expect = 6.430e-58 Identity = 105/223 (47.09%), Postives = 138/223 (61.88%), Query Frame = 1
Query: 145 MATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITYR 813
MA LGR+A I+E E+KL R +TLWEGEE ALRYV+EDGKLN+CLRNL +++ + R + + + +D FEKGMG +LRNAW HVEALQTTD+P LV ++T V+ DAAD+P V + D+ RQE++C+ YL G+V ++ + E RVMP LR AGT+ LA ML + H LG +A +G L C TEDF TYR
Sbjct: 1 MAQTLGRVASITEMESKLP------------RASSRQTLWEGEEQALRYVIEDGKLNICLRNLVDFKAYEMKLRSDDVEPEQ---RQKDLMDKFEKGMGCMLRNAWNHVEALQTTDMPALVNHITTVFSDAADSPERVAQLT---DITDRQEVLCMYYLHGMVGQMEEMSEERVMPMLRAAGTLVALARMLSSCHAALGRDARELGTVCLGLACGTEDFATYR 205
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A1W0ACG5_9STRA (DUF218 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACG5_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.650e-57 Identity = 114/264 (43.18%), Postives = 156/264 (59.09%), Query Frame = 1
Query: 25 YQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNR--RDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITY 810
Y+ + DS+E LS+KL+ADLR ++R + +P+LSDEW +MA + R +ISE E KL K TLWE EE+ALRY+LEDGKLN+CLR L E++++ RN RD P + + SFE+G+G +L+NAW HVEALQTTD+PLL+EYV + + + PG + D A QE++ L YL GL+ RL D E R+MP ++ +A L N+R E AE LA +CDTEDF T+
Sbjct: 323 YEKSSDADSIERLSSKLTADLRNHVRFMADYPILSDEWKEMAKNMTRFGEISEMERKLP-------------KQENATLWECEELALRYILEDGKLNLCLRILVEYKEYERNTAIRDFD-------PDTKKLMASFERGLGVMLKNAWLHVEALQTTDLPLLIEYVATILNNCREEPGFFSEK----DPADSQEVIVLYYLHGLLKRLEDIGESRIMPLMQERQIFELVAWHLEHNNRSFSPEDTLTAAEVLALICDTEDFQTH 562
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A485L431_9STRA (Aste57867_15868 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L431_9STRA) HSP 1 Score: 194 bits (492), Expect = 3.660e-57 Identity = 113/255 (44.31%), Postives = 146/255 (57.25%), Query Frame = 1
Query: 46 DSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITY 810
DS+E LS KL+ADLR +IR LG +P+LS+EW +MA + R +ISE E L K TLWE EE+ALRY+LEDGKLN+CLR L E++ + G E E + FE+G+G +L+NAW HVEALQTTD+PLL+EYV V + P VE DL QE++ + YL GL +L E RVMP ++ + LAA L N + VGAE LA +CDTEDF T+
Sbjct: 14 DSLEKLSQKLTADLRNHIRFLGDYPVLSNEWKEMAHNMRRFGEISEMERNLP-------------KQENATLWECEELALRYILEDGKLNLCLRILVEYKSYEH-----GTAHREMDAETKEIVAMFERGLGVMLKNAWLHVEALQTTDLPLLIEYVASVLTFCEEEPAYVETK----DLEDSQEVIVMYYLHGLFKQLEHISESRVMPLVQEKNIFALLAAHLQRNWKSFSPSDVRVGAEVLALICDTEDFQTH 246
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A067CKH1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKH1_SAPPC) HSP 1 Score: 193 bits (490), Expect = 7.100e-57 Identity = 114/262 (43.51%), Postives = 153/262 (58.40%), Query Frame = 1
Query: 25 YQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITY 810
Y+ + D +E L+AKL+ADLR +IR LG +P+LS EW +MA + R +ISE E +L K TLWE EE+ALRY+LEDGKLN+CLR L E++++ RN G D E L+L+ FE+G+G +L+NAW HVEALQTTD+PLLVEY+ V + P + DL QE++ L YL GL+ RL D E R+MP L+ + L NH + V AE LA +CD+EDF T+
Sbjct: 7 YEKSSDADGIEKLTAKLTADLRNHIRFLGDYPILSTEWKEMARNMTRFGEISEMERQLP-------------KQENATLWECEELALRYILEDGKLNLCLRLLVEYKEYERNTL-GRDFDAEAKDLLLK----FERGLGVMLKNAWLHVEALQTTDLPLLVEYIASVLTFCHEEP----EFYKTKDLEDCQEVIVLYYLHGLMKRLDDIGESRIMPLLQERQVFELVLWHLQHNHTSFSPDDVLVTAEVLAQICDSEDFQTH 246
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: W4FWN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWN5_9STRA) HSP 1 Score: 186 bits (472), Expect = 3.560e-54 Identity = 111/255 (43.53%), Postives = 147/255 (57.65%), Query Frame = 1
Query: 46 DSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITY 810
DS+E LS KL+ADLR +IR LG +P+LS EW +MA + R +ISE E + K TLWE EE+ALRY+LEDGKLN+CLR L E++ + G Q D P E + FE+G+G +L+NAW HVEALQTTD+PLL+EYV GV + P VE + DL QEI+ + YL GL+ +L E RVMP + + LA+ + + + V E LA +CDTEDF T+
Sbjct: 14 DSLEKLSLKLTADLRNHIRFLGDYPVLSAEWREMARNMMRFGEISEMERHMP-------------KQDNATLWECEELALRYILEDGKLNLCLRLLVEYKDYEH----GISQRDLD-PEAKELISQFERGLGVMLKNAWLHVEALQTTDLPLLLEYVAGVLTFCEEEPAYVE----KKDLVDSQEILVVYYLHGLLKQLEHISEDRVMPLVLEKQLFALLASHIQRHWKSFSDTDVIVACEVLALLCDTEDFQTH 246
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A5D6XRR2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRR2_9STRA) HSP 1 Score: 185 bits (470), Expect = 8.880e-54 Identity = 113/276 (40.94%), Postives = 153/276 (55.43%), Query Frame = 1
Query: 1 MMARRQQAYQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPL---VLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEA------AAVGAEALAFVCDTEDF 801
M R+ Y K +D+ E LS+KL+ADLR ++R + +P+LSD+W KMA +GRI DI+E E L K TLWE EE+ALRY+LEDGKLN+CLRNL ++ + + E GP+ +E + FE+GMG L+NAW H EA+QTTDIPLL+EY+ ++ +NP + D + QEI + +L GL +L +E RVMP + S LA L N L + AVG EALA +C TEDF
Sbjct: 1 MSTSRKAHYAPKREQDTFEELSSKLTADLRAHVRFMADYPVLSDDWNKMAEQIGRIGDITEMERSLP-------------KQQDATLWECEEIALRYLLEDGKLNLCLRNLVDYNDYLKRMI-------ERGPIKDSTMELMQKFERGMGLTLKNAWLHAEAVQTTDIPLLIEYIHSIFSYCLENPNYLADK----KMDNCQEITIVHFLLGLCKQLDAIDESRVMPLIIEKRIFSLLAMHLSMNIHLLTVSPDSQSADIAVGVEALALLCATEDF 252 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7630.18848.1 >prot_Ecto-sp13_S_contig7630.18848.1 ID=prot_Ecto-sp13_S_contig7630.18848.1|Name=mRNA_Ecto-sp13_S_contig7630.18848.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=271bp MMARRQQAYQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMAback to top mRNA from alignment at Ecto-sp13_S_contig7630:3947..7195+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7630.18848.1 ID=mRNA_Ecto-sp13_S_contig7630.18848.1|Name=mRNA_Ecto-sp13_S_contig7630.18848.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3249bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7630:3947..7195+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7630:3947..7195+ >mRNA_Ecto-sp13_S_contig7630.18848.1 ID=mRNA_Ecto-sp13_S_contig7630.18848.1|Name=mRNA_Ecto-sp13_S_contig7630.18848.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7630:3947..7195+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |