mRNA_Ecto-sp13_S_contig7630.18848.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7630.18848.1
Unique NamemRNA_Ecto-sp13_S_contig7630.18848.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A6H5JGV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV1_9PHAE)

HSP 1 Score: 519 bits (1337), Expect = 5.050e-185
Identity = 259/271 (95.57%), Postives = 263/271 (97.05%), Query Frame = 1
Query:    1 MMARRQQAYQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITYR 813
            MMARR QAYQS NGEDSMEALS KLSADLRGNIRALGAFPLLSDEWCKMATALGRIA+ISEAEA+LTQDCIEGERK+GERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGG QAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDM LRGDLAGRQEIVCLSYLRGLVS LSDYEEGRVMPHLRGA T+SCLAAMLHANHRHLGMEAAAVGAEALAFVC TEDFITYR
Sbjct:    2 MMARRPQAYQSNNGEDSMEALSTKLSADLRGNIRALGAFPLLSDEWCKMATALGRIAEISEAEARLTQDCIEGERKEGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGGQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMSLRGDLAGRQEIVCLSYLRGLVSCLSDYEEGRVMPHLRGAETVSCLAAMLHANHRHLGMEAAAVGAEALAFVCGTEDFITYR 272          
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: D7G0I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0I2_ECTSI)

HSP 1 Score: 447 bits (1151), Expect = 6.500e-157
Identity = 232/271 (85.61%), Postives = 236/271 (87.08%), Query Frame = 1
Query:    1 MMARRQQAYQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITYR 813
            MMARR  AY SKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIA+ISEAE                            EMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGG QAGEDGPLVLESL+SFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNP AVEDM LRGDLAGRQEIVCLSYLRGLVSRLSD+EEGRVMPHLRGAGT+SCLAAMLHANHRHLGMEAAAVGAEALAFVC TEDFITYR
Sbjct:    1 MMARRLHAYHSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIAEISEAE----------------------------EMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGGQAGEDGPLVLESLNSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPDAVEDMSLRGDLAGRQEIVCLSYLRGLVSRLSDHEEGRVMPHLRGAGTVSCLAAMLHANHRHLGMEAAAVGAEALAFVCGTEDFITYR 243          
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A7S2V4C5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4C5_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.460e-69
Identity = 123/263 (46.77%), Postives = 163/263 (61.98%), Query Frame = 1
Query:   25 YQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITYR 813
            Y SK  +D + ALS  LS DLR  IRALG+FP+LSD W  MA   GRIA+IS+ E+KL +D                TLWE EE+ALRY+LEDGKLN+CLRNL E++ F R  R+       D     + LD+FEKG+G VLRNAW HVEA+QTTD+PLL+ Y+  V  DA  NP  +E     G+L  RQE+V + YL  L++++ +  E RVMP ++     S L +++HA+H  L         +AL+ +CDTEDF TY+
Sbjct:    7 YMSKCDDDDIFALSKTLSNDLRTAIRALGSFPVLSDSWNGMADTFGRIANISDMESKLPKDSENA------------TLWECEELALRYLLEDGKLNLCLRNLVEFKNFERELRNAPATLPTD---HRDKLDAFEKGLGCVLRNAWRHVEAIQTTDLPLLINYIGDVMEDAVRNPTRLESFQKAGELEKRQEVVVIYYLASLMTQVDEVSEDRVMPLIKERRLFSLLVSVMHAHHAKLNEGDLLAALKALSLICDTEDFSTYK 254          
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A1V9ZS11_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS11_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.410e-59
Identity = 117/262 (44.66%), Postives = 156/262 (59.54%), Query Frame = 1
Query:   25 YQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITY 810
            Y+  +  D +E LSAKL+ADLR +IR LG +P+LS+EW +MA  + R  +ISE E KL              K    TLWE EE+ALRY+LEDGKLN+CLR L +++++ RN   G D   E   L+L+    FE+G+G +L+NAW HVEALQTTD+PLLVEY+  V     + P   +      DL   QE++ L YL+GL  RL D  E R+MP ++       +   L  NHR L  E   V A+ LA +CDTEDF T+
Sbjct:    7 YEKSSDADGIEKLSAKLTADLRSHIRFLGDYPILSEEWKEMANNMTRFGEISEMERKLP-------------KQENATLWECEELALRYILEDGKLNLCLRLLVDYKEYERNTI-GRDFDAEAKELLLK----FERGLGVMLKNAWLHVEALQTTDLPLLVEYIATVLTFCHEEPEFFKSK----DLEDSQEVIVLYYLQGLFKRLEDIGESRIMPLVQERQIFELVLWHLQHNHRSLSPEDTLVAADVLAQICDTEDFQTH 246          
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A835YQR7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQR7_9STRA)

HSP 1 Score: 197 bits (501), Expect = 6.430e-58
Identity = 105/223 (47.09%), Postives = 138/223 (61.88%), Query Frame = 1
Query:  145 MATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITYR 813
            MA  LGR+A I+E E+KL             R    +TLWEGEE ALRYV+EDGKLN+CLRNL +++ +    R    +  +      + +D FEKGMG +LRNAW HVEALQTTD+P LV ++T V+ DAAD+P  V  +    D+  RQE++C+ YL G+V ++ +  E RVMP LR AGT+  LA ML + H  LG +A  +G   L   C TEDF TYR
Sbjct:    1 MAQTLGRVASITEMESKLP------------RASSRQTLWEGEEQALRYVIEDGKLNICLRNLVDFKAYEMKLRSDDVEPEQ---RQKDLMDKFEKGMGCMLRNAWNHVEALQTTDMPALVNHITTVFSDAADSPERVAQLT---DITDRQEVLCMYYLHGMVGQMEEMSEERVMPMLRAAGTLVALARMLSSCHAALGRDARELGTVCLGLACGTEDFATYR 205          
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A1W0ACG5_9STRA (DUF218 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACG5_9STRA)

HSP 1 Score: 202 bits (514), Expect = 1.650e-57
Identity = 114/264 (43.18%), Postives = 156/264 (59.09%), Query Frame = 1
Query:   25 YQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNR--RDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITY 810
            Y+  +  DS+E LS+KL+ADLR ++R +  +P+LSDEW +MA  + R  +ISE E KL              K    TLWE EE+ALRY+LEDGKLN+CLR L E++++ RN   RD         P   + + SFE+G+G +L+NAW HVEALQTTD+PLL+EYV  +  +  + PG   +     D A  QE++ L YL GL+ RL D  E R+MP ++       +A  L  N+R    E     AE LA +CDTEDF T+
Sbjct:  323 YEKSSDADSIERLSSKLTADLRNHVRFMADYPILSDEWKEMAKNMTRFGEISEMERKLP-------------KQENATLWECEELALRYILEDGKLNLCLRILVEYKEYERNTAIRDFD-------PDTKKLMASFERGLGVMLKNAWLHVEALQTTDLPLLIEYVATILNNCREEPGFFSEK----DPADSQEVIVLYYLHGLLKRLEDIGESRIMPLMQERQIFELVAWHLEHNNRSFSPEDTLTAAEVLALICDTEDFQTH 562          
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A485L431_9STRA (Aste57867_15868 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L431_9STRA)

HSP 1 Score: 194 bits (492), Expect = 3.660e-57
Identity = 113/255 (44.31%), Postives = 146/255 (57.25%), Query Frame = 1
Query:   46 DSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITY 810
            DS+E LS KL+ADLR +IR LG +P+LS+EW +MA  + R  +ISE E  L              K    TLWE EE+ALRY+LEDGKLN+CLR L E++ +       G    E      E +  FE+G+G +L+NAW HVEALQTTD+PLL+EYV  V     + P  VE      DL   QE++ + YL GL  +L    E RVMP ++     + LAA L  N +        VGAE LA +CDTEDF T+
Sbjct:   14 DSLEKLSQKLTADLRNHIRFLGDYPVLSNEWKEMAHNMRRFGEISEMERNLP-------------KQENATLWECEELALRYILEDGKLNLCLRILVEYKSYEH-----GTAHREMDAETKEIVAMFERGLGVMLKNAWLHVEALQTTDLPLLIEYVASVLTFCEEEPAYVETK----DLEDSQEVIVMYYLHGLFKQLEHISESRVMPLVQEKNIFALLAAHLQRNWKSFSPSDVRVGAEVLALICDTEDFQTH 246          
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A067CKH1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKH1_SAPPC)

HSP 1 Score: 193 bits (490), Expect = 7.100e-57
Identity = 114/262 (43.51%), Postives = 153/262 (58.40%), Query Frame = 1
Query:   25 YQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITY 810
            Y+  +  D +E L+AKL+ADLR +IR LG +P+LS EW +MA  + R  +ISE E +L              K    TLWE EE+ALRY+LEDGKLN+CLR L E++++ RN   G D   E   L+L+    FE+G+G +L+NAW HVEALQTTD+PLLVEY+  V     + P    +     DL   QE++ L YL GL+ RL D  E R+MP L+       +   L  NH     +   V AE LA +CD+EDF T+
Sbjct:    7 YEKSSDADGIEKLTAKLTADLRNHIRFLGDYPILSTEWKEMARNMTRFGEISEMERQLP-------------KQENATLWECEELALRYILEDGKLNLCLRLLVEYKEYERNTL-GRDFDAEAKDLLLK----FERGLGVMLKNAWLHVEALQTTDLPLLVEYIASVLTFCHEEP----EFYKTKDLEDCQEVIVLYYLHGLMKRLDDIGESRIMPLLQERQVFELVLWHLQHNHTSFSPDDVLVTAEVLAQICDSEDFQTH 246          
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: W4FWN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWN5_9STRA)

HSP 1 Score: 186 bits (472), Expect = 3.560e-54
Identity = 111/255 (43.53%), Postives = 147/255 (57.65%), Query Frame = 1
Query:   46 DSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEAAAVGAEALAFVCDTEDFITY 810
            DS+E LS KL+ADLR +IR LG +P+LS EW +MA  + R  +ISE E  +              K    TLWE EE+ALRY+LEDGKLN+CLR L E++ +      G  Q   D P   E +  FE+G+G +L+NAW HVEALQTTD+PLL+EYV GV     + P  VE    + DL   QEI+ + YL GL+ +L    E RVMP +      + LA+ +  + +        V  E LA +CDTEDF T+
Sbjct:   14 DSLEKLSLKLTADLRNHIRFLGDYPVLSAEWREMARNMMRFGEISEMERHMP-------------KQDNATLWECEELALRYILEDGKLNLCLRLLVEYKDYEH----GISQRDLD-PEAKELISQFERGLGVMLKNAWLHVEALQTTDLPLLLEYVAGVLTFCEEEPAYVE----KKDLVDSQEILVVYYLHGLLKQLEHISEDRVMPLVLEKQLFALLASHIQRHWKSFSDTDVIVACEVLALLCDTEDFQTH 246          
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Match: A0A5D6XRR2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRR2_9STRA)

HSP 1 Score: 185 bits (470), Expect = 8.880e-54
Identity = 113/276 (40.94%), Postives = 153/276 (55.43%), Query Frame = 1
Query:    1 MMARRQQAYQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMATALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLEDGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPL---VLESLDSFEKGMGTVLRNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQEIVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEA------AAVGAEALAFVCDTEDF 801
            M   R+  Y  K  +D+ E LS+KL+ADLR ++R +  +P+LSD+W KMA  +GRI DI+E E  L              K    TLWE EE+ALRY+LEDGKLN+CLRNL ++  + +          E GP+    +E +  FE+GMG  L+NAW H EA+QTTDIPLL+EY+  ++    +NP  + D      +   QEI  + +L GL  +L   +E RVMP +      S LA  L  N   L +         AVG EALA +C TEDF
Sbjct:    1 MSTSRKAHYAPKREQDTFEELSSKLTADLRAHVRFMADYPVLSDDWNKMAEQIGRIGDITEMERSLP-------------KQQDATLWECEEIALRYLLEDGKLNLCLRNLVDYNDYLKRMI-------ERGPIKDSTMELMQKFERGMGLTLKNAWLHAEAVQTTDIPLLIEYIHSIFSYCLENPNYLADK----KMDNCQEITIVHFLLGLCKQLDAIDESRVMPLIIEKRIFSLLAMHLSMNIHLLTVSPDSQSADIAVGVEALALLCATEDF 252          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7630.18848.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGV1_9PHAE5.050e-18595.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0I2_ECTSI6.500e-15785.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V4C5_9STRA1.460e-6946.77Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1V9ZS11_9STRA1.410e-5944.66Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A835YQR7_9STRA6.430e-5847.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1W0ACG5_9STRA1.650e-5743.18DUF218 domain-containing protein n=1 Tax=Thraustot... [more]
A0A485L431_9STRA3.660e-5744.31Aste57867_15868 protein n=1 Tax=Aphanomyces stella... [more]
A0A067CKH1_SAPPC7.100e-5743.51Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
W4FWN5_9STRA3.560e-5443.53Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A5D6XRR2_9STRA8.880e-5440.94Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7630contigEcto-sp13_S_contig7630:3947..7195 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score453.0
Seed ortholog evalue9.9e-125
Seed eggNOG ortholog2880.D7G0I2
Model size813
Hectar predicted targeting categoryother localisation
Exons7
EggNOG OGs2BYFE@1,2S2HC@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-20_002420.1
Cds size813
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7630.18848.1prot_Ecto-sp13_S_contig7630.18848.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7630 3947..7195 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464033.5571194-CDS-Ecto-sp13_S_contig7630:3946..40541681464033.5571194-CDS-Ecto-sp13_S_contig7630:3946..4054Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7630 3947..4054 +
1681464033.5702412-CDS-Ecto-sp13_S_contig7630:4480..45611681464033.5702412-CDS-Ecto-sp13_S_contig7630:4480..4561Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7630 4481..4561 +
1681464033.581825-CDS-Ecto-sp13_S_contig7630:5112..51961681464033.581825-CDS-Ecto-sp13_S_contig7630:5112..5196Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7630 5113..5196 +
1681464033.5938475-CDS-Ecto-sp13_S_contig7630:5506..56351681464033.5938475-CDS-Ecto-sp13_S_contig7630:5506..5635Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7630 5507..5635 +
1681464033.6067016-CDS-Ecto-sp13_S_contig7630:6061..61811681464033.6067016-CDS-Ecto-sp13_S_contig7630:6061..6181Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7630 6062..6181 +
1681464033.6210072-CDS-Ecto-sp13_S_contig7630:6362..64401681464033.6210072-CDS-Ecto-sp13_S_contig7630:6362..6440Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7630 6363..6440 +
1681464033.6343005-CDS-Ecto-sp13_S_contig7630:6982..71951681464033.6343005-CDS-Ecto-sp13_S_contig7630:6982..7195Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7630 6983..7195 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7630.18848.1

>prot_Ecto-sp13_S_contig7630.18848.1 ID=prot_Ecto-sp13_S_contig7630.18848.1|Name=mRNA_Ecto-sp13_S_contig7630.18848.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=271bp
MMARRQQAYQSKNGEDSMEALSAKLSADLRGNIRALGAFPLLSDEWCKMA
TALGRIADISEAEAKLTQDCIEGERKKGERKDCPKTLWEGEEMALRYVLE
DGKLNVCLRNLSEWRKFHRNRRDGGDQAGEDGPLVLESLDSFEKGMGTVL
RNAWTHVEALQTTDIPLLVEYVTGVYRDAADNPGAVEDMCLRGDLAGRQE
IVCLSYLRGLVSRLSDYEEGRVMPHLRGAGTISCLAAMLHANHRHLGMEA
AAVGAEALAFVCDTEDFITYR
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mRNA from alignment at Ecto-sp13_S_contig7630:3947..7195+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7630.18848.1 ID=mRNA_Ecto-sp13_S_contig7630.18848.1|Name=mRNA_Ecto-sp13_S_contig7630.18848.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3249bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7630:3947..7195+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGGCGAGGCGCCAACAGGCATACCAATCAAAGAACGGCGAGGATAG CATGGAAGCTCTCTCCGCCAAGCTCAGCGCAGATCTTAGAGGCAACATTC GGGCGCTGGTGAGATTGTACTGGATCTTACGCATATGCATGATGAGCTGT CGAACCAAGAATGAGTAAATACAATGTACTGTGTTACTTACAATACGGTG CGAGAATCCCGCACGCAGTAGAACATGTCACGAGACCAAGAGGAAGAACA TCGACATGGATCTTGCTGTACAGTGCTTGTTTGAAGCACTCAAGCCAAGA ATCAAACTTGGCGTCTTATCTACGGTATGTTTTTTTATGTCTTCACATTG CACTCCGACTGACAAGAAACGTCCAACGCACACGAACAGACACGTATTTC AGATTAGCTTGTATGTTTCGAGAGTTTCAATGTCAGATTTGCTGCCACGC GACCCCAAGTGATCACGAAACAAGCCTGAGACCTGTTGTCGACACTTCAC TACTGCTGTATCCACCGCTTCGCATTCACGACAGGGGGCGTTTCCTCTGC TCTCTGATGAGTGGTGTAAAATGGCGACCGCTCTAGGCAGGATAGCTGAT ATATCGGAGGCGGAGGTGGGTGGAAGCGTTCGATGCAGCGAGGCGCGCAC GATCTTCGTCAGAGCATGCTGCAGAACTTGTGTCGCAATAAATGTTTGTG TTGATGATAGACGACTGTTTCTGCACGTGTCCCTCGCCCGAACCAATCTG TTTCAAGTGTTTCCACTACATGTACTGTACATGCATACGGTAAGTTCCTT CTGTCCGAGGCCACCATGCTTCTTTTGTTTCACCCGAAACGGAACGAACG ACACTCCAGTTTTAGAGGTGTCTGGTGAGTGCTCGGTTCGAAGGCTAACG CCAAAAGCGTGTTGTCCTATGGTTGGAACGTTTGAAGACACTGCAGCAGT GCTACAAGCCCCAAAGACAAACTTGCCAAGAGCTCATCCAGCAGGTTGTA AAACATATGAACAGAACACCAAAGGCTGTTGTCGGACCATTACATGCTAA CGGCACACGTCGCGCATGCACCCGGGCAGTCAGTTTTACTTTCGAATACG AGGCATTATGCTTCCAAATTTCAAGCCGGTGCTTGCTCGCGAAACAACGC CATCGATGCCTGCCAGGCAAAACTAACTCAAGACTGCATTGAGGGAGAAC GGAAGAAAGGAGAGAGAAAGGACTGTCCGAAGACGCTGTGGGAAGGCGAA GTAAGGACCCGTCACAGTAGACATGAGTGTCAGTAGTTCTGCTACAGTCC GACGAGTTGACACTCTCCGCGTCAGCAAATAAATTCTACAATATCCGTCG TATCCTGTTGTCAGGAAAACTTGCGATACACAGGCATATATGATACGGGA CGCACCACCTCACCGCTGATCACAGCAGTGTCCAAAATCGGTGCTCTGCG TGTGTCGGGTGGCTTCACGTAGAAAGCCCGACCGACCGAGTGTACGCCCG CGCGTCGCCAAAAACTACTAGCGAACCCGTTGTCGTTGGTGTGCCTGTTG ATTATTTCAGGAGATGGCGTTGCGCTACGTCCTGGAGGACGGGAAGCTCA ACGTGTGTCTTCGGAACCTGTCTGAATGGAGAAAATTCCATCGAAATAGG CGTGACGGCGGTGACCAGGCGGGCGAGGACGGACCGTTGGTAAGAACACG CTTATCGTGATTTGTGGTGATTCTCATTGTGTGTCACCTTTTGCTAGGGA GAAAGCATTCCAGGAACCAATGTCGTATCGTTTATGTAGGTACGCGTGAC GGGAACGAGAGATGTGCAGCACTTCATCGAGGCTACTTCATCAGCTGTTC CGTTTTTTGACACCTCTTCACTTCACACACACACACACACCTGTGCACGT CCCAAAAACAATGTGACCGTTGTTCCGTTAGGCTTGAGGACCTTATCGCG AGCTCTGTGTGTAAAAAAGAAGTGGTTTGTGAAGTACTGTAGTGTGGTGC CGAATAGCTCGCAAAGCAGGCGACCACCCGTTTGTCTAAAATTGGAATGT CGCCGATGGCAACTCAGTTCTTTTCATCACTGTCGCGCCTGTGACACGAC CTCCGGTGAAAAAAGGTGCTCGAAAGCTTGGACTCTTTCGAGAAGGGTAT GGGGACCGTTCTTCGGAACGCATGGACCCACGTCGAGGCCCTCCAGACCA CGGACATCCCATTGCTTGTGGAATACGTTACCGGGGTGAGGAAAATATCA AGACACACCCGAGTTTTACCCGAGACTTTCCGTTCATACGTGATTTGGTC AGTACATACTACAGTTAGTCGGTTGCGATGTTCAGCGCTGAGTGACCCAT ACGTCAATGTTTCGACAATTACCCCCTTGTCATAAAAACACCGTGGTATG AAAACACGAACCGCAGGTGTATAGGGACGCAGCTGACAACCCCGGTGCTG TCGAGGACATGTGCTTGAGAGGAGACTTGGCGGGACGTCAGGAGGTAACG GAACGTAGTCTTGAGTGTGTGTAACAACAGTAATGCTTAGCTATTAGATT CAAAGCATCCACCTGTTACTGTTCTATTCAACGCCACCCTATCTGCTAGG CATTGTTTATCAATCCTTGTAGATACATGTCGACCCTTTTCTACATTGAA TTCTTCATTCTCGACCAATGACAAAGAAGTCAAACGTAAGGGGCTCACAG AGCGCTCACAAGTTTCGGCGTACTTCTTCGCGCCAATGTTCGCCTATTGT GCTCAACATCATTTGTTGGCTGTCGCGCATTGAAAACGGTGCCACGATAT TCAAATATCTCGTCGCTGTAAGGAGTGAGTTTAAACGTGTCAGAGAAGAA GACGCACCTGCGCCGACTTTGAATCTGCTTACCGGTCGGCTACTGCCCCT ACTGGCGTCTGTTGACGATCACACATTAACGACTACTGAGAATGCGCCCG TGAGCGTTACACACAGCAGCTCTGCCCAGGTTTGCAACAAATCGCTACTT TGGTCTCCGCTCGATGCACATTTCTTGGGCGCGTAGATAGTGTGCCTCAG CTACTTGCGAGGGCTGGTTTCGCGCCTGAGCGACTACGAGGAGGGCCGGG TCATGCCGCACCTCAGGGGAGCCGGAACCATTTCGTGCCTGGCGGCAATG CTGCACGCCAACCATCGGCACCTCGGGATGGAAGCCGCGGCGGTAGGGGC GGAGGCTCTGGCGTTCGTGTGCGACACTGAGGACTTCATCACGTACCGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7630:3947..7195+

>mRNA_Ecto-sp13_S_contig7630.18848.1 ID=mRNA_Ecto-sp13_S_contig7630.18848.1|Name=mRNA_Ecto-sp13_S_contig7630.18848.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=813bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7630:3947..7195+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGGCGAGGCGCCAACAGGCATACCAATCAAAGAACGGCGAGGATAG
CATGGAAGCTCTCTCCGCCAAGCTCAGCGCAGATCTTAGAGGCAACATTC
GGGCGCTGGGGGCGTTTCCTCTGCTCTCTGATGAGTGGTGTAAAATGGCG
ACCGCTCTAGGCAGGATAGCTGATATATCGGAGGCGGAGGCAAAACTAAC
TCAAGACTGCATTGAGGGAGAACGGAAGAAAGGAGAGAGAAAGGACTGTC
CGAAGACGCTGTGGGAAGGCGAAGAGATGGCGTTGCGCTACGTCCTGGAG
GACGGGAAGCTCAACGTGTGTCTTCGGAACCTGTCTGAATGGAGAAAATT
CCATCGAAATAGGCGTGACGGCGGTGACCAGGCGGGCGAGGACGGACCGT
TGGTGCTCGAAAGCTTGGACTCTTTCGAGAAGGGTATGGGGACCGTTCTT
CGGAACGCATGGACCCACGTCGAGGCCCTCCAGACCACGGACATCCCATT
GCTTGTGGAATACGTTACCGGGGTGTATAGGGACGCAGCTGACAACCCCG
GTGCTGTCGAGGACATGTGCTTGAGAGGAGACTTGGCGGGACGTCAGGAG
ATAGTGTGCCTCAGCTACTTGCGAGGGCTGGTTTCGCGCCTGAGCGACTA
CGAGGAGGGCCGGGTCATGCCGCACCTCAGGGGAGCCGGAACCATTTCGT
GCCTGGCGGCAATGCTGCACGCCAACCATCGGCACCTCGGGATGGAAGCC
GCGGCGGTAGGGGCGGAGGCTCTGGCGTTCGTGTGCGACACTGAGGACTT
CATCACGTACCGG
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