prot_Ecto-sp13_S_contig763.18846.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig763.18846.1
Unique Nameprot_Ecto-sp13_S_contig763.18846.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length621
Homology
BLAST of mRNA_Ecto-sp13_S_contig763.18846.1 vs. uniprot
Match: A0A6H5KRX1_9PHAE (Homeobox domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRX1_9PHAE)

HSP 1 Score: 813 bits (2101), Expect = 1.780e-290
Identity = 499/577 (86.48%), Postives = 507/577 (87.87%), Query Frame = 0
Query:   51 EASLCVTTRGAQEQQRQQGPGRVSSPILLMGHQQQPLPYSPDAQVISFPDPYPHDDSDPLSFFLSSGRGXXXXXXXGLGSVADGTFGGRKATPEELMLFRSHRLLQAEAVGVVIGPLHSSSGADAAYVRKRLGLVSRAVERQVRLKVLEQTNAAVEGVRALGEGAPPAQQQSVINAERRNCHRVLSGVLDEGTATLRELSTTGGGGLGGVNVDMGMGMAFPPSALGSPATESQQLASTWEDAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHHMPPGTGRSSVFALTQMRDRSQHHHSQLGMPLGSTRMEGAGGMKQQGMGSSFGSGGGAAAPPGHNHGRLSDPSARFDGDSWGSTGXXXXXXXXXXXXRATSNVGKAKKRSGLLKKTPPSDALTDPRRPVYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYTAAGKATPKALAANRVGGRSXXXXXXXXXXXXXXXXXXXXASGVAADAMPLRRMLSKIISRS--------VSARGGVGADTPTSTP 619
            EASLCVTTRG Q+QQRQQG GRVSSPIL MGHQQQPLPY PDAQVISF DPYPHDDSDPLSFFLSSGRGXXXXXXXGLGSVADGTFGGRKATPEELMLFRSHRLLQAEAVGV IGPLHSS GADAAYVRKRL LVS AVERQ+RLKVLEQTNAAVEGVRALGEGAPPAQQQSVINAERRNCHRVLSGVLDEGTATL+ELSTTGGGG G V+VDMGM MA PPSALGSPATESQQLASTWEDAAT   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  LHHMPPGTGRSSVFALTQMRDR QHHHSQLGM LGSTRMEGA GMKQQGMG+SFGSGGGAAAPPGH+HG LSDPSA FDGD WG+TG            RATSNVGKAK RSGLLKKTPPSDA+TDPRR VYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYTAAGKATPKALAANRV GRSXXXXXXXXXXXXXXXXXXXX                              VSARGGVGAD PTSTP
Sbjct:   51 EASLCVTTRGPQDQQRQQGLGRVSSPILFMGHQQQPLPYPPDAQVISFTDPYPHDDSDPLSFFLSSGRGXXXXXXXGLGSVADGTFGGRKATPEELMLFRSHRLLQAEAVGVAIGPLHSSGGADAAYVRKRLRLVSTAVERQLRLKVLEQTNAAVEGVRALGEGAPPAQQQSVINAERRNCHRVLSGVLDEGTATLKELSTTGGGGQGDVSVDMGMDMALPPSALGSPATESQQLASTWEDAATSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILHHMPPGTGRSSVFALTQMRDRPQHHHSQLGMALGSTRMEGADGMKQQGMGASFGSGGGAAAPPGHDHGGLSDPSAGFDGDLWGATGGGASVGGGGRGKRATSNVGKAKNRSGLLKKTPPSDAVTDPRRSVYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYTAAGKATPKALAANRVVGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKMFVSARGGVGADAPTSTP 627          
BLAST of mRNA_Ecto-sp13_S_contig763.18846.1 vs. uniprot
Match: D7FSL4_ECTSI (Transcription factor protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL4_ECTSI)

HSP 1 Score: 642 bits (1655), Expect = 1.860e-225
Identity = 372/482 (77.18%), Postives = 378/482 (78.42%), Query Frame = 0
Query:   80 MGHQQQPLPYSPDAQVISFPDPYPHDDSDPLSFFLSSGRGXXXXXXXGLGSVADGTFGGRKATPEELMLFRSHRLLQAEAVGVVIGPLHSSSGADAAYVRKRLGLVSRAVERQVRLKVLEQTNAAVEGVRALGEGAPPAQQQSVINAERRNCHRVLSGVLDEGTATLRELSTTGGGGLGGVNVDMGMGMAFPPSALGSPATESQQLASTWEDAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHHMPPGTGRSSVFALTQMRDRSQHHHSQLGMPLGSTRMEGAGGMKQQGMGSSFGSGGGAAAPPGHNHGRLSDPSARFDGDSWGSTGXXXXXXXXXXXXRATSNVGKAKKRSGLLKKTPPSDALTDPRRPVYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYTAAGKATPKALAANRVGGRS 561
            MGHQQQPLPY PDAQV+SFP+PYPHDDSDPLSFFLSSGRGXXXXXXXGLGSVADGTFGGRKATPEELMLFRSHRLLQAEAVGV IGPLH S GA+AAYVRKRLGLVS AVERQ+RLKVLEQTN AVEGVRALGEGAPPAQQQSVINAERRNCHRVLSGVLDEGTATLRELSTTGGGGLGGV+VDMGMGMAFPPSALGSPATESQQL                                                                            GM LGSTRMEGAGGMKQQGMG+SFGSGGGA APPGHNHG LSDPSA           XXXXXXXXXXXX    NVGKAKKRSGLLKKTPPSDALTD RRPVYNNRKGSRHRLTPQAKEILEGWLA HWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITY AAGKATPKALAANRV GRS
Sbjct:    1 MGHQQQPLPYPPDAQVLSFPEPYPHDDSDPLSFFLSSGRGXXXXXXXGLGSVADGTFGGRKATPEELMLFRSHRLLQAEAVGVAIGPLHPSGGANAAYVRKRLGLVSTAVERQLRLKVLEQTNTAVEGVRALGEGAPPAQQQSVINAERRNCHRVLSGVLDEGTATLRELSTTGGGGLGGVSVDMGMGMAFPPSALGSPATESQQL----------------------------------------------------------------------------GMALGSTRMEGAGGMKQQGMGASFGSGGGAVAPPGHNHGGLSDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXNVGKAKKRSGLLKKTPPSDALTDSRRPVYNNRKGSRHRLTPQAKEILEGWLANHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYAAAGKATPKALAANRVVGRS 406          
BLAST of mRNA_Ecto-sp13_S_contig763.18846.1 vs. uniprot
Match: A0A0N4Z519_PARTI (Homeobox domain-containing protein n=1 Tax=Parastrongyloides trichosuri TaxID=131310 RepID=A0A0N4Z519_PARTI)

HSP 1 Score: 64.3 bits (155), Expect = 9.930e-8
Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 0
Query:  462 VYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKI 530
            V +N+K  R     +A  ILE +   H   PYP E  KLYLA+ C++T TQ+ NW  N R+R  + KK+
Sbjct:  178 VQHNKKRGRRNFPKEATAILEKYFKDHIDKPYPDERDKLYLAEKCNLTTTQITNWFGNKRIRCMKKKKL 246          
BLAST of mRNA_Ecto-sp13_S_contig763.18846.1 vs. uniprot
Match: A0A0B1TTQ3_OESDE (Homeobox domain protein n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1TTQ3_OESDE)

HSP 1 Score: 58.9 bits (141), Expect = 3.750e-7
Identity = 26/60 (43.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:  470 RHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKK 529
            R   + +A  IL+ +   H  +PYPTEE+K+ LA+ CHI+V QV+NW  N R+R  ++K+
Sbjct:   25 RRNFSKEATCILQKYYDSHLEHPYPTEEEKIALAEKCHISVQQVSNWFGNRRIRTKKSKR 84          
BLAST of mRNA_Ecto-sp13_S_contig763.18846.1 vs. uniprot
Match: A0A077WBY5_9FUNG (Homeobox domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WBY5_9FUNG)

HSP 1 Score: 62.8 bits (151), Expect = 7.270e-7
Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = 0
Query:  442 RSGLLKK---TPPSDALTDPRRPVYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVR 523
            RS  +KK   + PS + +D    V + +K  R  L      IL  WLAKH  +PYPTEE+K+ LAQ  ++T+ Q++NW +N R R
Sbjct:  182 RSSTIKKQSSSTPSTSTSDITSSVSHTKK-RRGNLPKPVTAILRDWLAKHKTHPYPTEEEKVALAQQTNLTINQISNWFINARRR 265          
BLAST of mRNA_Ecto-sp13_S_contig763.18846.1 vs. uniprot
Match: A0A068RNT1_9FUNG (Homeobox domain-containing protein n=1 Tax=Lichtheimia corymbifera JMRC:FSU:9682 TaxID=1263082 RepID=A0A068RNT1_9FUNG)

HSP 1 Score: 62.0 bits (149), Expect = 1.310e-6
Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 0
Query:  434 SNVGKAKKRSGLLKKTPPSDALTDPRRPVYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVR 523
            S+ G  KK+S     T     +T       N+ K  R  L      IL  WLAKH  +PYPTE++K+ LAQ  ++T+ Q++NW +N R R
Sbjct:  180 SSSGTIKKQSSSALPTTACSNMTS----SINHTKKRRGNLPKPVTAILRDWLAKHKKHPYPTEDEKVALAQQTNLTINQISNWFINARRR 265          
BLAST of mRNA_Ecto-sp13_S_contig763.18846.1 vs. uniprot
Match: A0A0K0G4K3_STRVS (Pre-B-cell leukemia transcription factor 4 (inferred by orthology to a human protein) n=2 Tax=Strongyloides TaxID=6247 RepID=A0A0K0G4K3_STRVS)

HSP 1 Score: 60.8 bits (146), Expect = 1.430e-6
Identity = 25/69 (36.23%), Postives = 42/69 (60.87%), Query Frame = 0
Query:  462 VYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKI 530
            V +N+K  R     +   ILE +  +H   PYP +++KL+LA+ C++T TQ+ NW  N R+R  + +K+
Sbjct:  178 VQHNKKRGRRNFPKEVTTILEKYFNEHIDRPYPNDQEKLFLAEKCNLTTTQITNWFGNKRIRCMKKEKL 246          
BLAST of mRNA_Ecto-sp13_S_contig763.18846.1 vs. uniprot
Match: UPI001CFCA5A7 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFCA5A7)

HSP 1 Score: 62.4 bits (150), Expect = 2.210e-6
Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 0
Query:  470 RHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYTAAGKATPKALAANR 556
            R  L   A  +L+ WL  H+L+PYP+E +K  L     +T+TQVNNW +N RVR  R     +  G ++ T +     TP+  ++ R
Sbjct:  686 RGNLPRHATNVLKSWLFSHFLHPYPSESEKKDLCMETGLTLTQVNNWFINQRVRTWRPMLESMLEGEKDKTASGGEGGTPQPSSSTR 772          
BLAST of mRNA_Ecto-sp13_S_contig763.18846.1 vs. uniprot
Match: A0A166C1X0_9AGAM (Homeobox domain-containing protein (Fragment) n=1 Tax=Peniophora sp. CONT TaxID=1314672 RepID=A0A166C1X0_9AGAM)

HSP 1 Score: 55.1 bits (131), Expect = 2.450e-6
Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  470 RHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVR 521
            R +L  +A E L+ WL  H  +PYPTEE+K  +     +T++Q++NWM+NVR
Sbjct:    4 RAKLPKEATEYLKDWLHSHANHPYPTEEEKTQMCAKTGLTLSQISNWMINVR 55          
BLAST of mRNA_Ecto-sp13_S_contig763.18846.1 vs. uniprot
Match: A0A077WNK0_9FUNG (Homeobox domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WNK0_9FUNG)

HSP 1 Score: 59.7 bits (143), Expect = 3.020e-6
Identity = 29/72 (40.28%), Postives = 41/72 (56.94%), Query Frame = 0
Query:  452 SDALTDPRRPVYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVR 523
            S     PR      R+G+   L  Q  E L+ WL  H  +PYP+E++KL+LAQ   +TV Q++NW +N R R
Sbjct:  103 SQQYPQPRASTSKRRRGN---LPKQVTEYLKSWLVDHKQHPYPSEKEKLHLAQRTGLTVNQISNWFINARRR 171          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig763.18846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRX1_9PHAE1.780e-29086.48Homeobox domain-containing protein n=1 Tax=Ectocar... [more]
D7FSL4_ECTSI1.860e-22577.18Transcription factor protein n=1 Tax=Ectocarpus si... [more]
A0A0N4Z519_PARTI9.930e-842.03Homeobox domain-containing protein n=1 Tax=Parastr... [more]
A0A0B1TTQ3_OESDE3.750e-743.33Homeobox domain protein n=1 Tax=Oesophagostomum de... [more]
A0A077WBY5_9FUNG7.270e-741.18Homeobox domain-containing protein n=1 Tax=Lichthe... [more]
A0A068RNT1_9FUNG1.310e-637.78Homeobox domain-containing protein n=1 Tax=Lichthe... [more]
A0A0K0G4K3_STRVS1.430e-636.23Pre-B-cell leukemia transcription factor 4 (inferr... [more]
UPI001CFCA5A72.210e-635.63uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A166C1X0_9AGAM2.450e-644.23Homeobox domain-containing protein (Fragment) n=1 ... [more]
A0A077WNK0_9FUNG3.020e-640.28Homeobox domain-containing protein n=1 Tax=Lichthe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 466..531
e-value: 4.8E-8
score: 42.7
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 464..527
score: 12.147
NoneNo IPR availableGENE3D1.10.10.60coord: 438..525
e-value: 1.0E-18
score: 69.0
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 123..526
NoneNo IPR availablePANTHERPTHR11850:SF211HOMEOBOX PROTEIN CEH-20-RELATEDcoord: 123..526
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 484..523
e-value: 8.7E-13
score: 47.9
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 466..529

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig763contigEcto-sp13_S_contig763:13885..18436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig763.18846.1mRNA_Ecto-sp13_S_contig763.18846.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig763 13885..18638 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig763.18846.1 ID=prot_Ecto-sp13_S_contig763.18846.1|Name=mRNA_Ecto-sp13_S_contig763.18846.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=621bp
MDSGSAASSSSSGAMVFPAKASSGGGGGTDSPAAVASSSTASNSSSGSVI
EASLCVTTRGAQEQQRQQGPGRVSSPILLMGHQQQPLPYSPDAQVISFPD
PYPHDDSDPLSFFLSSGRGDSDPLGFGLGSVADGTFGGRKATPEELMLFR
SHRLLQAEAVGVVIGPLHSSSGADAAYVRKRLGLVSRAVERQVRLKVLEQ
TNAAVEGVRALGEGAPPAQQQSVINAERRNCHRVLSGVLDEGTATLRELS
TTGGGGLGGVNVDMGMGMAFPPSALGSPATESQQLASTWEDAATSSSMNS
SSSNSIGSSCLTSMQLQQQPQRQQQQQQQSILHHMPPGTGRSSVFALTQM
RDRSQHHHSQLGMPLGSTRMEGAGGMKQQGMGSSFGSGGGAAAPPGHNHG
RLSDPSARFDGDSWGSTGGGASVGGGGGGKRATSNVGKAKKRSGLLKKTP
PSDALTDPRRPVYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKL
YLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYTAAGKATPK
ALAANRVGGRSSSSSSIAAPASSSKQEGGGGASGVAADAMPLRRMLSKII
SRSVSARGGVGADTPTSTPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR008422Homeobox_KN_domain
IPR009057Homeobox-like_sf