prot_Ecto-sp13_S_contig1224.1884.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1224.1884.1
Unique Name	prot_Ecto-sp13_S_contig1224.1884.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	679

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1224.1884.1 vs. uniprot
Match: A0A6H5KJF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF2_9PHAE)

HSP 1 Score: 392 bits (1008), Expect = 5.400e-123
Identity = 355/491 (72.30%), Postives = 360/491 (73.32%), Query Frame = 0

Query:  210 MSGSESRYSAGSAGSSAFSTPILRRHRQSWSNEDIESAPSMRSRSRMRRSMRAKLGSKSFNDLDDSVHLTSPGKRSARFSSSEGTTYGHRTVRSSLSFGGLLGSMGGSXXXXXXXXXXXXXXXXRSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCSTPSFAAPADKRNXXXXXXXXXXXXXXXXXXXXXXXXXPVGGATSAAGGVPYDRTTTVG------------YSRLLARFTKGPSPRGDRQKPXXXXXDRFAVSAAASRELGSGTTIATASNLGGSNRNNLSGXXXXXXXXXXXXXXXXXXXXXXXXXX----SGNISVSLTNKRRVFTFANNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSAPVSVTAPSSAYSSXXXXXXXXXXXXXXXXXXXASLATAEVAVRQSSSFSPATTRARPGAGDTAGGSV-----PIGAAAAAAAVDPVSSTRKPPRFALPSMSGFPAMNPA 679
            MSGSESRYSAGSAGSSAFSTPILRRHRQSWSNEDIESA S+RSRSRMRRSMR+KLGSKSFNDLDDSVHLTSPGKR ARFSSSEGTTYGHRTVRSSLSF GLLGSMGGSXXXXXXXXXXXXXXXXRSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCST SFA PA+KR+XXXXXXXXXX      XXXXXXXXX          GVPYDRTTTVG            YSRLLARFTKGPSPRGDRQKPXXXXX                                   XXXXXXXXXXXXXXXXXXXXXXXXXX    SGNISVSLTNKRRVFTFANN XXXXXXXXXXXXXX         XXX           ERSAPVS TAPSSAYSS                   ASLATAEVAVRQ SSFSPATTRARPGAGDTAGG V     PIGAA         SSTRKP RF +PSMSGFPAMNPA
Sbjct:    1 MSGSESRYSAGSAGSSAFSTPILRRHRQSWSNEDIESAASIRSRSRMRRSMRSKLGSKSFNDLDDSVHLTSPGKRIARFSSSEGTTYGHRTVRSSLSFRGLLGSMGGSXXXXXXXXXXXXXXXXRSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCSTHSFAVPAEKRSXXXXXXXXXXGEKDGRXXXXXXXXXXXXXXXXXXXGVPYDRTTTVGGEGREEKITVLGYSRLLARFTKGPSPRGDRQKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNISVSLTNKRRVFTFANNXXXXXXXXXXXXXXXCAHAGSLSAXXXSSAPCPGAGAGERSAPVSATAPSSAYSSPPGGAKQRPLLVPLAAPATASLATAEVAVRQPSSFSPATTRARPGAGDTAGGFVDGGSGPIGAAXXXXXXXXXSSTRKPSRFVVPSMSGFPAMNPA 491

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BLAST of mRNA_Ecto-sp13_S_contig1224.1884.1 vs. uniprot
Match: D8LPX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX7_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 4.150e-54
Identity = 160/177 (90.40%), Postives = 161/177 (90.96%), Query Frame = 0

Query:  250 MRSRSRMRRSMRAKLGSKSFNDLDDSVHLTSPGKRSARFSSSEGTTYGHRTVRSSLSFGGLLGSMGGSXXXXXXXXXXXXXXXXRSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCSTPSFAAPADKRNXXXXXXXXXXXXXXXXXXXXXXXXXPVGGATSAAG-GVPYDRTTTV 425
            MRSRSRMRRSMRAKLGSKSFNDLDDSVHL SPGKRSARFSSSEGTTYGHR VRSSLSFGGLLGSMGGS XXXXXXXXXXXXXX RSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCSTPSFAAPA+KR XXXXXXXXXXXXXXXXXXXXXXXXX           GVPYDRTTTV
Sbjct:    1 MRSRSRMRRSMRAKLGSKSFNDLDDSVHLISPGKRSARFSSSEGTTYGHRAVRSSLSFGGLLGSMGGSSXXXXXXXXXXXXXXHRSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCSTPSFAAPAEKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPYDRTTTV 177

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BLAST of mRNA_Ecto-sp13_S_contig1224.1884.1 vs. uniprot
Match: D8LPX6_ECTSI (C2 NT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX6_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 2.190e-37
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0

Query:   57 GLPPKVVSTTRSEWEQTMQVVITLFLDKRSGRFQDKEYKLRLVQAEKGCTIIMAPALATFTLDASLYAHLGAG 129
            GLPPKVVST RSEWEQTMQVVITLFLDKRSGRFQDKEYKLRLVQAE+GCTIIMAPALATFTLDASLYAHLGAG
Sbjct:   13 GLPPKVVSTARSEWEQTMQVVITLFLDKRSGRFQDKEYKLRLVQAEEGCTIIMAPALATFTLDASLYAHLGAG 85

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1224.1884.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1224.1884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5KJF2_9PHAE	5.400e-123	72.30	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LPX7_ECTSI	4.150e-54	90.40	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LPX6_ECTSI	2.190e-37	97.26	C2 NT-type domain-containing protein n=1 Tax=Ectoc...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..34
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 30..34
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 35..679
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 18..29
IPR019448	NT-type C2 domain	PROSITE	PS51840	C2_NT	coord: 8..160 score: 17.323

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1224	contig	Ecto-sp13_S_contig1224:4325..14811 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1224.1884.1	mRNA_Ecto-sp13_S_contig1224.1884.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1224 4325..14811 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1224.1884.1 ID=prot_Ecto-sp13_S_contig1224.1884.1|Name=mRNA_Ecto-sp13_S_contig1224.1884.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=679bp
MTSFLRKAARMNLVAMDFVLQVTVVELVLGTLLGDGRTLSFELSRGTKAS
CCCCSSGLPPKVVSTTRSEWEQTMQVVITLFLDKRSGRFQDKEYKLRLVQ
AEKGCTIIMAPALATFTLDASLYAHLGAGPSVDQPVDLYAPKLNGPGGFA
TVHLRVRCCETGRPSQSFRSLSAPNVMRPSVSVRTGFPLRGPLDQSRPGL
LVGSSFGFSMSGSESRYSAGSAGSSAFSTPILRRHRQSWSNEDIESAPSM
RSRSRMRRSMRAKLGSKSFNDLDDSVHLTSPGKRSARFSSSEGTTYGHRT
VRSSLSFGGLLGSMGGSSSVGGGQQSPRQQQQHRSALSGRRAVAVQTAAA
HVTASPGTGVLTSESSCSTPSFAAPADKRNSSSSGGGAAASEKDGRGGGG
SGRRGPVGGATSAAGGVPYDRTTTVGYSRLLARFTKGPSPRGDRQKPPPP
PPDRFAVSAAASRELGSGTTIATASNLGGSNRNNLSGSSGSAASGGGGGG
VGSSGGSGASSSTSGNISVSLTNKRRVFTFANNSSNNKNKAPTTTTTSYA
HAGSLPAPPPSSAPLPGAGAGERSAPVSVTAPSSAYSSPPGGAKQQPLPV
PLTAPAAASLATAEVAVRQSSSFSPATTRARPGAGDTAGGSVPIGAAAAA
AAVDPVSSTRKPPRFALPSMSGFPAMNPA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019448	NT-C2