prot_Ecto-sp13_S_contig76285.18843.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig76285.18843.1
Unique Nameprot_Ecto-sp13_S_contig76285.18843.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp13_S_contig76285.18843.1 vs. uniprot
Match: A0A7S2SSD0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSD0_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 6.350e-20
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    3 EVFLPPIGGLTIYIFGDPALIPDESVELTVRVHDECNGSDVFG 45
            +VFLPPIGGLT+YI+GDPALIPDE VELTVRVHDECNGSDVFG
Sbjct:  265 KVFLPPIGGLTVYIWGDPALIPDEDVELTVRVHDECNGSDVFG 307          
BLAST of mRNA_Ecto-sp13_S_contig76285.18843.1 vs. uniprot
Match: A0A482UFG5_9ARCH (GTP_cyclohydro2 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UFG5_9ARCH)

HSP 1 Score: 82.4 bits (202), Expect = 1.820e-19
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    2 LEVFLPPIGGLTIYIFGDPALIPDESVELTVRVHDECNGSDVFG 45
            +++FLPPIGG TIY++GDP+ IPDESV LTVRVHDECNGSDVFG
Sbjct:   11 IKLFLPPIGGQTIYMWGDPSTIPDESVPLTVRVHDECNGSDVFG 54          
BLAST of mRNA_Ecto-sp13_S_contig76285.18843.1 vs. uniprot
Match: A0A8J6CF81_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CF81_DIALT)

HSP 1 Score: 87.4 bits (215), Expect = 6.200e-19
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    2 LEVFLPPIGGLTIYIFGDPALIPDESVELTVRVHDECNGSDVFG 45
            +EVFLPPIGG TIYIFGDPA IPDES  LTVRVHDECNGSDVFG
Sbjct:  647 IEVFLPPIGGCTIYIFGDPATIPDESKPLTVRVHDECNGSDVFG 690          
BLAST of mRNA_Ecto-sp13_S_contig76285.18843.1 vs. uniprot
Match: A0A7S2RF37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RF37_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.310e-18
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    2 LEVFLPPIGGLTIYIFGDPALIPDESVELTVRVHDECNGSDVFG 45
            +++FLPPIGGLTIYI+GDP  IPDE +ELT RVHDECNGSDVFG
Sbjct:  102 IKIFLPPIGGLTIYIWGDPDTIPDEDIELTCRVHDECNGSDVFG 145          
BLAST of mRNA_Ecto-sp13_S_contig76285.18843.1 vs. uniprot
Match: A0A1Z5J8K7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8K7_FISSO)

HSP 1 Score: 86.3 bits (212), Expect = 1.460e-18
Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    2 LEVFLPPIGGLTIYIFGDPALIPDESVELTVRVHDECNGSDVFG 45
            +++FLPPIGGLTIYI+GDPA IPDE +ELT RVHDECNGSDVFG
Sbjct:  261 IKIFLPPIGGLTIYIWGDPATIPDEDIELTCRVHDECNGSDVFG 304          
BLAST of mRNA_Ecto-sp13_S_contig76285.18843.1 vs. uniprot
Match: B7FNY5_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FNY5_PHATC)

HSP 1 Score: 86.3 bits (212), Expect = 1.480e-18
Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    2 LEVFLPPIGGLTIYIFGDPALIPDESVELTVRVHDECNGSDVFG 45
            +++FLPPIGGLTIYI+GDPA IPDE +ELT RVHDECNGSDVFG
Sbjct:  279 IKIFLPPIGGLTIYIWGDPATIPDEDIELTCRVHDECNGSDVFG 322          
BLAST of mRNA_Ecto-sp13_S_contig76285.18843.1 vs. uniprot
Match: A0A6T6EAG3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6EAG3_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.690e-18
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    2 LEVFLPPIGGLTIYIFGDPALIPDESVELTVRVHDECNGSDVFG 45
            ++VFLPPIGGLT+YI+GDP  IPDE +ELT RVHDECNGSDVFG
Sbjct:   12 IKVFLPPIGGLTVYIWGDPDTIPDEDIELTCRVHDECNGSDVFG 55          
BLAST of mRNA_Ecto-sp13_S_contig76285.18843.1 vs. uniprot
Match: A0A7S0CFI6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CFI6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.840e-18
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    2 LEVFLPPIGGLTIYIFGDPALIPDESVELTVRVHDECNGSDVFG 45
            ++VFLPPIGGLTIYI+GDP  IPDE +ELT RVHDECNGSDVFG
Sbjct:   53 IKVFLPPIGGLTIYIWGDPDTIPDEDIELTCRVHDECNGSDVFG 96          
BLAST of mRNA_Ecto-sp13_S_contig76285.18843.1 vs. uniprot
Match: A0A7S2YEM1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YEM1_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.240e-18
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    2 LEVFLPPIGGLTIYIFGDPALIPDESVELTVRVHDECNGSDVFG 45
            ++VFLPPIGGLTIYI+GDP  IPDE +ELT RVHDECNGSDVFG
Sbjct:   75 IKVFLPPIGGLTIYIWGDPDTIPDEDIELTCRVHDECNGSDVFG 118          
BLAST of mRNA_Ecto-sp13_S_contig76285.18843.1 vs. uniprot
Match: A0A7R9WIM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WIM1_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.970e-18
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0
Query:    2 LEVFLPPIGGLTIYIFGDPALIPDESVELTVRVHDECNGSDVFG 45
            +++FLPPIGGLTIYI+GDP  IPDE +ELT RVHDECNGSDVFG
Sbjct:  115 IKIFLPPIGGLTIYIWGDPDTIPDEDIELTCRVHDECNGSDVFG 158          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig76285.18843.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2SSD0_9STRA6.350e-2090.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A482UFG5_9ARCH1.820e-1979.55GTP_cyclohydro2 domain-containing protein (Fragmen... [more]
A0A8J6CF81_DIALT6.200e-1988.64Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S2RF37_9STRA1.310e-1879.55Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A1Z5J8K7_FISSO1.460e-1881.82Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B7FNY5_PHATC1.480e-1881.82Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A6T6EAG3_9STRA1.690e-1879.55Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S0CFI6_9STRA1.840e-1881.82Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2YEM1_9STRA2.240e-1881.82Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7R9WIM1_9STRA2.970e-1879.55Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47259:SF2coord: 2..45
NoneNo IPR availablePANTHERPTHR47259FAMILY NOT NAMEDcoord: 2..45
IPR036144RibA-like superfamilySUPERFAMILY142695RibA-likecoord: 4..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig76285contigEcto-sp13_S_contig76285:443..583 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig76285.18843.1mRNA_Ecto-sp13_S_contig76285.18843.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig76285 443..583 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig76285.18843.1 ID=prot_Ecto-sp13_S_contig76285.18843.1|Name=mRNA_Ecto-sp13_S_contig76285.18843.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
LLEVFLPPIGGLTIYIFGDPALIPDESVELTVRVHDECNGSDVFGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036144RibA-like_sf