prot_Ecto-sp13_S_contig7628.18842.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7628.18842.1
Unique Nameprot_Ecto-sp13_S_contig7628.18842.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length553
Homology
BLAST of mRNA_Ecto-sp13_S_contig7628.18842.1 vs. uniprot
Match: D7FH76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH76_ECTSI)

HSP 1 Score: 488 bits (1255), Expect = 4.170e-163
Identity = 370/489 (75.66%), Postives = 381/489 (77.91%), Query Frame = 0
Query:   70 MENGDDEGFGYRGRGXXXGAPRDGRRKGRSRSQ-GLMGREHPREFAAEGNSEVEVGGTDVEEDGDDGYGHGY--GLSVSRLASRRXXXXXXXXXXXX-VPRSGPGVTAVSSSS-ELCRSATAGGAAASVHGTHAGGVXXXXGGSRVEYRSGRSREGDRHRAWPPSAAPALGSPVVAARDRSAGSGGGLDRNGGGEIRSTDHRVSSPRRLAARLGGXXXXXTRSADRRGSSPRKAXXXXXXXXXXXXXXXXXXXXGGGGVTRXXXXXXXXXXXXXXXXGELEAKVASSGVRGSSRGEGGGGGFSSCGGFLEAAGGGAENGTGRMSAAENEVQNTALRHALLLEERGLQLERAEALLRRKEEEEGLLKRELNRLGEASVADREVWRRLSKAEGEISSLLERSEALEDLAKDCQVALEKEQRARREDQDRHASELSRATGDAAAAAEAASREECAAKASRDLCEQMSAVCGQMRKAAEEAGARSASAEETVR 553
            MENGDD+GFGYRGRG   GAPRDGRR+GR RS  GL+GREHP+EFAAEG+  VE GGTDVE DG DGYG     GLSVSRLASR   XXXXX      V R+GPGVT VSSSS EL  SA AG A ASVHG HAGGV    GG RV YRSG SREGDRHRAWPPSA                                    VSSPRRLAARLGG XXXX               XXXXXXXXXXXXXXX  X GGG    XXXXXXXXXXXXXXXX ELEAKVASSGVRGSSR EGGGGGFSSCGGFL+A G GAENGTGRMSAAENEVQNTALRHALLLEERGLQLERAEALLRRKEEEEGLLKRELNRLGEASVADR+ WRRL+KAEGEISSLLERSEALEDLAKDCQ ALEKEQRARREDQDRHASELSRATGDAA AAEAASREE AA+ASR+LCEQMSAVCGQMRKAAEEAGARSASAEETVR
Sbjct:    1 MENGDDDGFGYRGRGGDGGAPRDGRRRGRRRSPPGLVGREHPQEFAAEGSCGVEAGGTDVE-DGGDGYGXXXXXGLSVSRLASRHSSXXXXXIKKKKTVLRAGPGVTPVSSSSDELRHSAPAGRATASVHGIHAGGVTAGGGGGRVGYRSGGSREGDRHRAWPPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSPRRLAARLGGSXXXXXXXXX----------XXXXXXXXXXXXXXXDGXGGGGXXXXXXXXXXXXXXXXXXXXXELEAKVASSGVRGSSREEGGGGGFSSCGGFLDAVGRGAENGTGRMSAAENEVQNTALRHALLLEERGLQLERAEALLRRKEEEEGLLKRELNRLGEASVADRDAWRRLAKAEGEISSLLERSEALEDLAKDCQAALEKEQRARREDQDRHASELSRATGDAATAAEAASREEAAAEASRNLCEQMSAVCGQMRKAAEEAGARSASAEETVR 478          
BLAST of mRNA_Ecto-sp13_S_contig7628.18842.1 vs. uniprot
Match: A0A6H5K6B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B9_9PHAE)

HSP 1 Score: 439 bits (1129), Expect = 9.760e-148
Identity = 296/383 (77.28%), Postives = 309/383 (80.68%), Query Frame = 0
Query:  105 MGREHPREFAAEGNSEVEVGGTDVEEDGDDGYGHGYGLSVSRLASR---RXXXXXXXXXXXXVPRSGPGVTAVSSS----SELCRSATAGGAAASVHGTHAGGVXXXXGGSRVEYRSGRSREGDRHRAWPPSAAPALGSPVVAARDRSAGSGGGLDRNGGGEIRSTDHRVSSPRRLAARLGGXXXXXTRSADRRGSSPRKAXXXXXXXXXXXXXXXXXXXXGGGGVTRXXXXXXXXXXXXXXXXGELEAKVASSGVRGSSRGEGGGGGFSSCGGFLEAAGGGAENGTGRMSAAENEVQNTALRHALLLEERGLQLERAEALLRRKEEEEGLLKRELNRLGEASVADREVWRRLSKAEGEISSLLERSEALEDLAKDCQVALEK 480
            MGREHPREFAAEG+SEVE GGTDVE DG DGYG+G+GLSVSRLASR    XXXXXXXXXXX VPR+GP VTAVS      SEL  SA AGGA ASVHGTHAGGV     G RV YRSGRSREGDRHRAWPPSAA A+GSPVVAARDRS G GGGLDR GGGE+RS D RVSSPRRLAARLGG     TRS DRR    R A            XXX      GGGVT XXXXXXXXXX      GELEAKVASSGVRGSSR EGGGGGFSSCGGF +  GGGAENGTGRMSAAENEVQNTALRHA LLEERGLQLERAEALLRRKEEEEGLLKREL+RLGEASVADR+ WRRL+KAEGEISSLL+RSEALEDLAKDC+VAL+K
Sbjct:    1 MGREHPREFAAEGSSEVEAGGTDVE-DGGDGYGYGHGLSVSRLASRPSXXXXXXXXXXXXXTVPRTGPDVTAVSXXXXXXSELRHSAPAGGATASVHGTHAGGVAAGGVGGRVGYRSGRSREGDRHRAWPPSAAAAVGSPVVAARDRSLG-GGGLDRTGGGEVRSADRRVSSPRRLAARLGGSGGCGTRSTDRRXXXXRNADRRGSFARRLAAXXXADVGGDGGGVTXXXXXXXXXXXRLAARLGELEAKVASSGVRGSSREEGGGGGFSSCGGFSDGVGGGAENGTGRMSAAENEVQNTALRHAFLLEERGLQLERAEALLRRKEEEEGLLKRELHRLGEASVADRDAWRRLAKAEGEISSLLKRSEALEDLAKDCRVALDK 381          
BLAST of mRNA_Ecto-sp13_S_contig7628.18842.1 vs. uniprot
Match: A0A6H5K0W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W7_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 2.290e-25
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0
Query:  478 LEKEQRARREDQDRHASELSRATGDAAAAAEAASREECAAKASRDLCEQMSAVCGQMRKAAEEAGARSASAEETVR 553
            + +EQRARREDQDRHASELSRATGDAAAAAE ASREECAAKASRDLCEQMSAVCGQMRKAAEEAGARSASAEETVR
Sbjct:    1 MHQEQRARREDQDRHASELSRATGDAAAAAEVASREECAAKASRDLCEQMSAVCGQMRKAAEEAGARSASAEETVR 76          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7628.18842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FH76_ECTSI4.170e-16375.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6B9_9PHAE9.760e-14877.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0W7_9PHAE2.290e-2594.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 450..487
NoneNo IPR availableCOILSCoilCoilcoord: 405..439

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7628contigEcto-sp13_S_contig7628:1009..6679 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7628.18842.1mRNA_Ecto-sp13_S_contig7628.18842.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7628 1009..6679 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7628.18842.1 ID=prot_Ecto-sp13_S_contig7628.18842.1|Name=mRNA_Ecto-sp13_S_contig7628.18842.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=553bp
QQQRQQTERWAGRRGTRRTPPAPPSTAHHNSRSMHYNHRRSSSSSSSQTD
GGSDVHTTSVSGSNTTGTCMENGDDEGFGYRGRGGGGGAPRDGRRKGRSR
SQGLMGREHPREFAAEGNSEVEVGGTDVEEDGDDGYGHGYGLSVSRLASR
RSSSSSTKKKKKTVPRSGPGVTAVSSSSELCRSATAGGAAASVHGTHAGG
VAAGGGGSRVEYRSGRSREGDRHRAWPPSAAPALGSPVVAARDRSAGSGG
GLDRNGGGEIRSTDHRVSSPRRLAARLGGGGGGGTRSADRRGSSPRKADR
RGSSPRRLAARLGADGGGGGGGVTRSADRRASSPRRLAARLGELEAKVAS
SGVRGSSRGEGGGGGFSSCGGFLEAAGGGAENGTGRMSAAENEVQNTALR
HALLLEERGLQLERAEALLRRKEEEEGLLKRELNRLGEASVADREVWRRL
SKAEGEISSLLERSEALEDLAKDCQVALEKEQRARREDQDRHASELSRAT
GDAAAAAEAASREECAAKASRDLCEQMSAVCGQMRKAAEEAGARSASAEE
TVR
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