mRNA_Ecto-sp13_S_contig7626.18840.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7626.18840.1
Unique NamemRNA_Ecto-sp13_S_contig7626.18840.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7626.18840.1 vs. uniprot
Match: A0A6H5KZT2_9PHAE (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZT2_9PHAE)

HSP 1 Score: 545 bits (1404), Expect = 1.080e-191
Identity = 285/289 (98.62%), Postives = 289/289 (100.00%), Query Frame = 1
Query:    1 VIANMMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDKLGPQGGDLEGTKAVFEVEAVEIKKRNVPEVNEEFAQSIREGLTLEELTREVEKAVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQGESDAKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQAKGQEFDEAKAQDKIEAQLEREMVLDWIDDRSKITWLPAKPVEKVDLEELGVVNSP 867
            VIANMMPFRENADGSKGEQLPNIASG+GVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDKLGPQGGDLEGTKAVFEVEAVEIKKRNVPEVNE+FAQSIREGLTLEELTREVEKAVMEETGTSK+DTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQGESDAKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQAKGQEFDEAKA+DKIEAQLEREMVLDWIDDRSKITWLPAKPVEKVDLEELGVVNSP
Sbjct:  241 VIANMMPFRENADGSKGEQLPNIASGEGVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDKLGPQGGDLEGTKAVFEVEAVEIKKRNVPEVNEDFAQSIREGLTLEELTREVEKAVMEETGTSKKDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQGESDAKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQAKGQEFDEAKARDKIEAQLEREMVLDWIDDRSKITWLPAKPVEKVDLEELGVVNSP 529          
BLAST of mRNA_Ecto-sp13_S_contig7626.18840.1 vs. uniprot
Match: A0A836CEY7_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEY7_9STRA)

HSP 1 Score: 253 bits (645), Expect = 7.680e-78
Identity = 136/275 (49.45%), Postives = 190/275 (69.09%), Query Frame = 1
Query:    1 VIANMMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDKLGPQGGDLEGTKAVFEVEAVEIKKRNVPEVNEEFAQSIREGLTLEELTREVEKAVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQG-ESDAKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQAKGQEFDEAKAQDKIEAQLEREMVLDWIDDRSKITWLPAKP 822
            VI +M PF    DGS+G+ LP +A G+ V+IVL+  ++MPGL EG+ G+ AG+TREI + FP++LG     L G +AVF+V   E++ R +P ++++FA +IR GLT+ EL  EV  A+ +E    K ++RN A E ALLE  +  IPETL+ E+AR+KFAIMM + K QG  SD +++ MIT ENF KY ++ R + T+ L +SL  + IAEKEGL     EVDDQM+LLRA+AKG+ FDEA A++++EA LE+EMVL WI +RS I +    P
Sbjct:  183 VIVDMYPFEVLDDGSRGDALPQLAGGEEVEIVLDEEKFMPGLMEGLLGITAGQTREIAVNFPERLGGAAAVLSGKRAVFDVTCREVRTRALPALDDDFANAIRPGLTMAELREEVLSALNQEGDKKKNESRNAALEAALLERITCEIPETLMTERARQKFAIMMADMKAQGTHSDEELRGMITPENFNKYKDIARGSTTKQLQVSLALSDIAEKEGLQVNPLEVDDQMELLRAEAKGEPFDEAAARERVEATLEKEMVLQWIAERSTINYTEVAP 457          
BLAST of mRNA_Ecto-sp13_S_contig7626.18840.1 vs. uniprot
Match: A0A7S2G352_9STRA (Peptidylprolyl isomerase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G352_9STRA)

HSP 1 Score: 249 bits (637), Expect = 5.000e-76
Identity = 134/291 (46.05%), Postives = 197/291 (67.70%), Query Frame = 1
Query:    1 VIANMMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDKLGPQ-GGDLEGTKAVFEVEAVEIKKRNVPEVNEEFAQSIREGLTLEELTREVEKAVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQGESDAKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQA--KGQEFDEAKAQDKIEAQLEREMVLDWIDDRSKITWLPAKP---VEKVDLEELGV 855
            +I NM  F+   DGSKG +L  +ASGD ++I+L+ G +MPG+ EG+ G KAGET+E+R+TFP         +L G  A+FEVE +++K R +PE+N+ FA SIREGLT  EL  EV+ AV  E      +TRNK  EE L++   + IPETLI+EQAREK+A MM+EF+ QG  D +I+ MITKE F KY ++   N+ + L  SL    IA KEG+  +K +V+DQ+ L++AQA  KG++FD+  A+D+IE Q++R++VL+W+ +R +I ++   P   V++++  EL V
Sbjct:  223 IIGNMNGFKVELDGSKGRELSEVASGDNLEILLQEGMFMPGMVEGLLGAKAGETKEVRVTFPQARSQNLPAELAGAPALFEVEVLDVKLRGLPELNDAFAGSIREGLTYAELLEEVKGAVSGENDKKNEETRNKVLEEELVKIADVEIPETLIMEQAREKYANMMSEFRAQGTPDEEIKKMITKEGFEKYKKIATPNIVKVLKSSLAVNDIANKEGIKVDKLDVEDQVALIKAQAEQKGEDFDDKTARDQIECQMQRDLVLNWLAERVEIEFVDVAPEPSVDELETAELSV 513          
BLAST of mRNA_Ecto-sp13_S_contig7626.18840.1 vs. uniprot
Match: H6WB92_VAULI (Peptidylprolyl isomerase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB92_VAULI)

HSP 1 Score: 246 bits (629), Expect = 1.380e-75
Identity = 129/255 (50.59%), Postives = 184/255 (72.16%), Query Frame = 1
Query:    1 VIANMMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDKLGPQGGDLEGTKAVFEVEAVEIKKRNVPEVNEEFAQSIREGLTLEELTREVEKAVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQGESD-AKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQAKGQEFDEAKAQDKIEAQLER 762
            +I +M PF    DGS+G+ LP +A G+ ++IVLE+ ++MPGL +G+ G+K GE REI + FPDKLG +   L G KAVF+V   E+  R +PEVN++FA SIR GLTL EL +E+  A+  E    K + R+KA E ALLE     IPETL++E+AR+KFAIMM + K QG+ D A+++ MIT ENF KY EVVR++ T+ L +SL  + IAEKEG+  ++ E++DQ++L+RA+ KG+EFDEA A+++IEA L++
Sbjct:  183 IIVDMSPFEVLEDGSRGDPLPQLAGGEDLEIVLEAEKFMPGLIDGLLGIKVGEMREIPVQFPDKLGGEANVLAGKKAVFDVTCNEVLLRTLPEVNDDFANSIRPGLTLAELDKEILSALNSEGDKKKFEARDKALEAALLERIEAEIPETLVIERARQKFAIMMADMKSQGQQDDAELRKMITPENFNKYKEVVRESTTKQLKVSLALSMIAEKEGIELDQGEIEDQLELIRAEVKGEEFDEAVAKERIEATLQK 437          
BLAST of mRNA_Ecto-sp13_S_contig7626.18840.1 vs. uniprot
Match: A0A6T5LN79_HETAK (Peptidylprolyl isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5LN79_HETAK)

HSP 1 Score: 236 bits (602), Expect = 6.050e-71
Identity = 128/271 (47.23%), Postives = 186/271 (68.63%), Query Frame = 1
Query:    1 VIANMMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDKLGPQGGDLEGTKAVFEVEAVEIKKRNVPEVNEEFAQSIREGLTLEELTREVEKAVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQG-ESDAKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQAKGQ-EFDEAKAQDKIEAQLEREMVLDWIDDRSKITW 807
             I +M  +   ADGS+GE LP +ASGD V++VLE GRY  GL EG+ G++AGE +++ +T P +     G+L   +A+F ++   +K R +PE N+EFA SIREGLT  EL  E++ AV +E    +   RN+A EEAL+E   I IPETL+VEQAREK+A+MM + K +G +SD +++ MIT ENF KY E+VR +VTRGL  S++   IA++E L+ ++ EV+DQ+ L++ QA+G   FDE   + +IEA L++ +VLDW+ D+  ITW
Sbjct:  226 AIVDMAGYLRAADGSRGEPLPELASGDQVEVVLEPGRYTEGLYEGVLGMRAGEEKDVVVTLPARFSV--GNLANKEAIFAIKCSAVKVRTLPEPNDEFAASIREGLTFAELNEEIKAAVGQENADIETQNRNRALEEALIEQVKIEIPETLVVEQAREKYAMMMADMKTEGSKSDEELKEMITPENFEKYKEIVRPSVTRGLAASIILADIAKREELAIDELEVEDQLQLVKNQARGDPNFDEEGVRARIEATLQKNIVLDWLADKGTITW 494          
BLAST of mRNA_Ecto-sp13_S_contig7626.18840.1 vs. uniprot
Match: A0A7S2SVM8_9STRA (Peptidylprolyl isomerase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVM8_9STRA)

HSP 1 Score: 227 bits (578), Expect = 2.120e-67
Identity = 126/279 (45.16%), Postives = 186/279 (66.67%), Query Frame = 1
Query:    1 VIANMMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDK----LGPQGGDLEGTKAVFEVEAVEIKKRNVPEVNEEFAQSIREGLTLEELTREVEKAVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQGESDAKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQA--KGQEFDEAKAQDKIEAQLEREMVLDWIDDRSKITWLPAK 819
            V  +MM +  N DG+KG  LP +ASG+GV+IVLE GR+MPGL EG+ G KAG+T ++R+ FP +    L P+   L G  A+FEV+   +K+R++PE+N++FA S+REGLT +EL +EV  AV EE     ++ RN   EEAL+      IPET+I EQ +EKFA+MM+E +D G  D +I+ MITKE F KY +V  KNV R L  ++    +A++EGLS+   +V+DQ+ L++AQA  + + F+E   + ++E+ L+R+ VL+WI +R  I  +  K
Sbjct:  226 VFGDMMGYVMNDDGTKGTALPAVASGEGVEIVLEQGRFMPGLVEGLVGAKAGDTVDVRVEFPKQATRTLTPE---LAGKPALFEVKVSAVKQRSLPELNDDFANSVREGLTYDELYKEVRNAVGEEGDRRNKEKRNVKIEEALVSITKCEIPETMINEQTKEKFAVMMSEQRDSGVPDEEIKKMITKEGFEKYKKVAYKNVYRTLAANIAIDDLAQREGLSFNPDDVEDQVGLMKAQAEQRNEPFEENMVRGRLESTLKRDTVLEWISERITINEIGPK 501          
BLAST of mRNA_Ecto-sp13_S_contig7626.18840.1 vs. uniprot
Match: A0A1Z5JF08_FISSO (Peptidylprolyl isomerase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JF08_FISSO)

HSP 1 Score: 216 bits (551), Expect = 1.030e-62
Identity = 114/265 (43.02%), Postives = 172/265 (64.91%), Query Frame = 1
Query:   10 NMMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDKLGPQGGDLEGTKAVFEVEAVEIKKRNVPEVNEEFAQSIREGLTLEELTREVEKAVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQGESDAKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQA-KGQEFDEAKAQDKIEAQLEREMVLDWIDDRSKI 801
            NM  +  N DGSKGE LPN ASGD V+++L  GRYM GL EG+ G K GETR + + FP+KL  +   L G KA+F+VE +++ KR VPE+ +EFA  ++ GLT E L RE+ KA+ EE        RNKA  EAL +   + +P+TL+  QAREKFA+MM + +D G +DA+I+  I  ENFAKY E+V+ ++ R   +S+    I   EG++    +V++QM  ++    KG+E+DE   + +++A LER+ V++W+ +++ +
Sbjct:  226 NMEGYMGNGDGSKGEPLPNAASGDNVEVILGPGRYMEGLVEGLVGAKVGETRTVSVAFPEKLRDKS--LAGKKAIFDVEVLQVAKRVVPELTDEFAAQVKAGLTKETLLRELRKAIDEEDAKEFLPARNKALGEALSKIVEVDVPDTLVTNQAREKFAVMMADMRDNGVADAEIKRQINPENFAKYKEIVKDDIIRDFKVSMATDEIGRLEGITVPDYQVEEQMQSIQKDMQKGEEYDENMIRARVQATLERQAVMNWLAEKADL 488          
BLAST of mRNA_Ecto-sp13_S_contig7626.18840.1 vs. uniprot
Match: A0A7S2LBQ1_9STRA (Peptidylprolyl isomerase n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LBQ1_9STRA)

HSP 1 Score: 216 bits (549), Expect = 5.420e-62
Identity = 111/262 (42.37%), Postives = 171/262 (65.27%), Query Frame = 1
Query:    4 IANMMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDKLGPQGGDLEGTKAVFEVEAVEIKKRNVPEVNEEFAQSIREGLTLEELTREVEKAVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQGESDAKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQAK--GQEFDEAKAQDKIEAQLEREMVLDWI 783
            + NM+ +   ADG KGE LPN ASGD V+I+L  GRYM GL EG+ G   G+T+ + + FPDKL  +   L G KAVF+V  +E   R++PE+N+EFA+ +R GLT+E L  E+ KA+ EE        RNKA  +AL E   + +PET++ +QA+EK+ +MMTE +D G SDA+I+ +IT ENF KY ++V  ++ +   +S+   ++ E E +    +++D+QM  L+ +A+  G+ F+EA  + K+EA L+R +V D++
Sbjct:  216 VVNMVGYMATADGEKGEPLPNAASGDNVEIILGQGRYMEGLVEGLIGASVGDTKTVTVAFPDKLRDKS--LAGKKAVFDVNVLETSTRSLPELNDEFAEKVRPGLTIESLKEELRKAIDEEDSKEYVGARNKALADALAEVLDVEVPETIVQQQAKEKYTLMMTEMRDGGTSDAEIKKLITPENFQKYRDIVADDIKKDFKISMASDYLGEIEQIEVPANQIDEQMGALKKEAESVGEAFEEAAIRPKVEATLQRRLVFDFL 475          
BLAST of mRNA_Ecto-sp13_S_contig7626.18840.1 vs. uniprot
Match: A0A2V3J6T1_9FLOR (Peptidylprolyl isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6T1_9FLOR)

HSP 1 Score: 208 bits (530), Expect = 2.520e-59
Identity = 109/277 (39.35%), Postives = 178/277 (64.26%), Query Frame = 1
Query:    1 VIANMMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDKLGPQGGDLEGTKAVFEVEAVEIKKRNVPEVNEEFAQSIREGLTLEELTREVEKAVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQGESDAKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQAKGQEFDEAKAQDKIEAQLEREMVLDWIDDRSKITWLPAKPVEK 831
            +IA+++ +  N DG+KG++LP IA G+ ++I +  G++M G  EG+ G+ AGETR++ + FP  +     +L G KAVF V    IK   +PE+N+EF + + E  TLE+L R +   +  E+ T++    N A +  L     + +PETL+  Q + KFA M++ FKD+G SD +++SM+TKEN+  Y E  + NV + L ++   + IA+ + L++++ EV++QM L+RA+ KG+E DE + +D+IEAQLERE+VL  I   +K+T +P K  E+
Sbjct:  340 LIADLVGYYRNEDGTKGDKLPEIADGNSIEINMTEGKFMAGFVEGLIGIGAGETRDVSVEFP--VSNPRKELAGVKAVFSVTVHAIKNMILPELNDEFVKQVSEEKTLEDLRRTIRDRIDTESETAQEKNINTAIDNKLASIVQVDLPETLVENQVKNKFATMLSSFKDKGMSDEQVKSMVTKENYEMYKERAKGNVEKSLRVNFAVSQIAKDQNLAFDEKEVENQMALVRAELKGEEMDEQRVRDQIEAQLERELVLQHIKKSAKVTLVPPKAEEQ 614          
BLAST of mRNA_Ecto-sp13_S_contig7626.18840.1 vs. uniprot
Match: A0A7S1VVG8_9STRA (Peptidylprolyl isomerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VVG8_9STRA)

HSP 1 Score: 206 bits (523), Expect = 6.340e-59
Identity = 112/266 (42.11%), Postives = 162/266 (60.90%), Query Frame = 1
Query:   10 NMMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGETREIRITFPDKLGPQGGDLEGTKAVFEVEAVEIKKRNVPEVNEEFAQSIREGLTLEELTREVEKAVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVEQAREKFAIMMTEFKDQGESDAKIQSMITKENFAKYVEVVRKNVTRGLTLSLMFTHIAEKEGLSYEKSEVDDQMDLLRAQA--KGQEFDEAKAQDKIEAQLEREMVLDWIDDRSKI 801
            NM+ +  N DG+KGE LPN ASGD V++++  GRYM GL EG+ G   G+ REI++TFP  L  +   L G  A+F++E +E   R +PEV +EFA  +R GLT E L  E+ KAV  E        RNKA  EAL E   + +P+TL+  QA+EKFA+MMTE +D G SD +I+  I  ENF KY ++V+ N+ R   +S+    IA  EG+     +V +Q+  ++  A    +EFDEA  + K+E  + R+MV D++ +  K+
Sbjct:  232 NMVGYMANEDGTKGEPLPNAASGDDVEVIIGKGRYMEGLVEGIMGASVGDKREIKVTFPVNLRDK--TLAGKTALFDIEILEASHRTLPEVTDEFANKVRAGLTAESLQEELRKAVDAEDAREFTPARNKALSEALSEVLDVQVPDTLVTNQAKEKFAVMMTEMRDNGVSDEEIKKQINPENFLKYKKIVKDNIVRDFKVSMAADEIARLEGIEVPDYQVQEQLAKIKKDAAESKEEFDEAMLRGKVETTIMRQMVFDFLAENGKL 495          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7626.18840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZT2_9PHAE1.080e-19198.62Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CEY7_9STRA7.680e-7849.45Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S2G352_9STRA5.000e-7646.05Peptidylprolyl isomerase n=2 Tax=Dictyocha speculu... [more]
H6WB92_VAULI1.380e-7550.59Peptidylprolyl isomerase n=1 Tax=Vaucheria litorea... [more]
A0A6T5LN79_HETAK6.050e-7147.23Peptidylprolyl isomerase n=1 Tax=Heterosigma akash... [more]
A0A7S2SVM8_9STRA2.120e-6745.16Peptidylprolyl isomerase n=2 Tax=Rhizochromulina m... [more]
A0A1Z5JF08_FISSO1.030e-6243.02Peptidylprolyl isomerase n=2 Tax=Fistulifera solar... [more]
A0A7S2LBQ1_9STRA5.420e-6242.37Peptidylprolyl isomerase n=2 Tax=Leptocylindrus da... [more]
A0A2V3J6T1_9FLOR2.520e-5939.35Peptidylprolyl isomerase n=1 Tax=Gracilariopsis ch... [more]
A0A7S1VVG8_9STRA6.340e-5942.11Peptidylprolyl isomerase n=1 Tax=Grammatophora oce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7626contigEcto-sp13_S_contig7626:81..4566 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score340.5
Seed ortholog evalue7.6e-91
Seed eggNOG ortholog2880.D7FZQ0
Model size870
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGs2QUET@2759,COG0544@1
Cds size858
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7626.18840.1prot_Ecto-sp13_S_contig7626.18840.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7626 93..4566 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464032.434143-UTR-Ecto-sp13_S_contig7626:80..921681464032.434143-UTR-Ecto-sp13_S_contig7626:80..92Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7626 81..92 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464032.4511688-CDS-Ecto-sp13_S_contig7626:92..1901681464032.4511688-CDS-Ecto-sp13_S_contig7626:92..190Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7626 93..190 +
1681464032.4614685-CDS-Ecto-sp13_S_contig7626:490..6411681464032.4614685-CDS-Ecto-sp13_S_contig7626:490..641Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7626 491..641 +
1681464032.4708931-CDS-Ecto-sp13_S_contig7626:1430..15671681464032.4708931-CDS-Ecto-sp13_S_contig7626:1430..1567Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7626 1431..1567 +
1681464032.4815114-CDS-Ecto-sp13_S_contig7626:2263..24171681464032.4815114-CDS-Ecto-sp13_S_contig7626:2263..2417Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7626 2264..2417 +
1681464032.4929976-CDS-Ecto-sp13_S_contig7626:2966..30651681464032.4929976-CDS-Ecto-sp13_S_contig7626:2966..3065Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7626 2967..3065 +
1681464032.5148609-CDS-Ecto-sp13_S_contig7626:3921..40381681464032.5148609-CDS-Ecto-sp13_S_contig7626:3921..4038Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7626 3922..4038 +
1681464032.5285435-CDS-Ecto-sp13_S_contig7626:4464..45661681464032.5285435-CDS-Ecto-sp13_S_contig7626:4464..4566Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7626 4465..4566 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7626.18840.1

>prot_Ecto-sp13_S_contig7626.18840.1 ID=prot_Ecto-sp13_S_contig7626.18840.1|Name=mRNA_Ecto-sp13_S_contig7626.18840.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=286bp
MMPFRENADGSKGEQLPNIASGDGVDIVLESGRYMPGLAEGMEGVKAGET
REIRITFPDKLGPQGGDLEGTKAVFEVEAVEIKKRNVPEVNEEFAQSIRE
GLTLEELTREVEKAVMEETGTSKRDTRNKAYEEALLETCSITIPETLIVE
QAREKFAIMMTEFKDQGESDAKIQSMITKENFAKYVEVVRKNVTRGLTLS
LMFTHIAEKEGLSYEKSEVDDQMDLLRAQAKGQEFDEAKAQDKIEAQLER
EMVLDWIDDRSKITWLPAKPVEKVDLEELGVVNSP*
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mRNA from alignment at Ecto-sp13_S_contig7626:81..4566+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7626.18840.1 ID=mRNA_Ecto-sp13_S_contig7626.18840.1|Name=mRNA_Ecto-sp13_S_contig7626.18840.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4486bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7626:81..4566+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTGATCGCCAACATGATGCCCTTCCGAGAGAACGCGGACGGGTCGAAGGG GGAACAGTTGCCCAACATCGCGTCCGGGGATGGTGTTGACATCGTCCTCG AGTCCGGCAGGTAGGGCATGGGGAAGAACTGAGCTATTTAGCAGCAGTGT TGAACGTGTTCACGTTCAAGTTTACCGTTTTTCGTTATTGACGTGTCTTT ACCTCGATGGTGTTGATGTGCCTCGCGTTCAATCCACCTAGTGTCGTGCG TATGTCGCAATAAGCTTCGTTCCTCTCATGCTTGTCTGAGAACGGCACAT TCCTCATAATTCATCTGAAGTTACATTCCTCTTACTCGTGCTTGAAAACG GGTACATTCCTCGTCATGTATCTGAACAAGTTACATCCCTCGTATGTCTG TCTGAAAAAGATACATGCCCGGTCTGGCGGAGGGCATGGAAGGAGTTAAG GCGGGGGAGACTAGGGAAATCAGGATCACGTTCCCGGACAAGCTGGGACC CCAGGGGGGCGACCTCGAGGGGACTAAGGCCGTCTTCGAGGTGGAAGCCG TCGAGATTAAGGTAAGACCGCACCCAACACCACACCACCCGATGAAGAAC GTTAGCGTTAACGGTCGTTTGTGTAGCTTGACTTGTGGCCGTCTGTGGTA TCTTGGAGGTGGAAGCAAGCGGTGGAGGTTTCTGGTGAAACGGCACTGGA TGAACTTTCGTTTGTTACCTCTCGTGCGCATTTTATGGTCTGGTGTTTTA CGTCTTTCTGATGTTGCTGGTTCGTCGGACCCGATTGTTGCAGGTTACGG TCATTTCGACGTCACTTTCAAGATTATCATATCGTAGCTTTCGTCAAAGC CCTCTCACATACCTCCTCTATGTCTCTCAGCTCCTTGAGCCGGCTAGTGT ATGGCTGGTCTCTTGCGAGCGAGGAGCGTGCACGGCTTCATCATTCTCGT TGTAGGGTGTTTACTGCAGGAGTTTTTCTATCTTGTGAGACAGAGAAACA GGCAGACCATCTTCACCCCTGACCTACGTCCTCGCTTGCGATTCCCTTCT GCTACAAAACAGGAGCAAAGGAGCTTCGTAGACCACGCCACTTAAGTGAT CCTAACACCGAACAAGCTACATCTAGTTCCACCGGCCTTTTCCCGTTAGT CTAGCAGTGCGTCTGTCGTTCTTGTCCTCAATCGTCCCTTAATCGTTTCC TTTTTGTCCTGTTCTTGTGTTCTTTTTGCAGAAACGCGAATCCATCTCCG CCGCCTCTATTTTTTTTTTGAAGAAATGCAACCCCACCGATGCGGCGGTC TCATCTTGACTTTCAATCGTCTTGTTTTTTTCTCTTTTTCGTTGTTGCAG AAACGCAATGTGCCGGAGGTGAACGAAGAGTTCGCGCAAAGCATCCGCGA GGGCCTGACTCTGGAAGAACTGACGAGGGAGGTGGAAAAGGCGGTCATGG AGGAGACGGGGACATCCAAGAGGGACACCCGAAACAAGTGCGTAATTATT TGTGACGCTGGTATACCAGAGAGCTTAACCATTTTTAGAAGGATATCTTG ATTTGTTACATCCTGACATGCCGATCCCAGGGAGCTACCAAGCCCTCGTT TCTATGTGGATTGGGTCAGTGGATTCGCGTCGGGTATTTGAAGCGCGGCG TAGACGCTCACAGCTACATGTATGCCATCGATTTTTCAAGCTCCATTGTA ATGGCGCCAAAACCACGAGGCTGCCGATATATTTCGAGAGAGACAGAGAG GAAGAGCTTGCCTTGCGAGTTTTGTATCCCTGTTTCTCTATTGTTTGTGG AGAAGTTTTCGGTCTCATCTTCAAAGGTCAACCAATCACGCACGTCTTCC CCATCACTTTTAACTTCCAGTCCAAAGGTGTTTGTTGCCATCTATCTCTG CGAGCATGTTCATCTTTCACATTCTTACCCCATGTTGACCACCGCGGCTG CTTAGCACTTGTTCCCGTCTGTCTCAGTCTGGCGTTCCATGTTGCACCAC GGCTGCTTAACCCTTGCCACCCCCACCCCACCCCACCCCCCTTCTCTGGC GCTCCCTTGTTGCATCACACCTGCTTAACTCTAACACTCCCCCCCTTTTC TGTCATTCTTTTTCTGTCAATCTCTGCTATTGTTTCGTCTCGTGGTCTGT GTTTGTTTTTTTGTGGTGTTGTTTTTTCTTCAGGGCCTACGAAGAAGCTC TCCTGGAGACGTGCTCGATTACCATCCCGGAGACCTTGATCGTGGAGCAG GCCCGCGAGAAGTTCGCCATCATGATGACCGAGTTTAAGGACCAGGGGGA GTCGGACGCTAAGATCCAGAGCATGATCACGAAGGAGGTCAGTTCTGCCT GCTCAGAGTTTCGTTATTTTAATTGATTTTTTCGTATTTGTTCTTGTATT TTTGGCTGTGTAGGTGTTGAGATCGGACGGATCAAAATCAAGAACTCAAT ATCGATTTTCTCGTTGGAAGGCACTGAGCAGAGACCGGAAGGGGGTTTGG GTGTGGAGACAACAACAGCGTCGGCGGGATGCTTGAGACGGTACAACAAC ACGTGTGGCTTGCCGGGTAGGGCTCGCTGCTTTATCTTAACCTTGTTGTC TTCCGGAGTATTTTATCTGCTGTTGTGCTATCGTTGCACGACAACATGCT TACGTCAGGACCTCTCGCGGGGGGTGGGCGGCATATGGGGAATAGTAGAT TGTTTCGTAGATTTCGTAGATCGGAAAGGAGCCTCCAACCCCGGGTTTTT TATGTTTGCGTGTTATTCACGCTCAGCCCTCATCTCACAGGCTACATACA TGTAATTCTGCTGTCGTGTCCCCTCTATCATCCGTTTATTTATTACATCA TGAGCCATATATTGTTTCGTTTGTCCCGAACTGCAGAACTTCGCCAAGTA CGTGGAGGTGGTGAGGAAAAACGTCACCCGAGGCCTGACTCTGAGCCTCA TGTTCACCCACATCGCCGAGAAGGAGGGCCTTTCGGTGCGTTCCATTTCC AGTAATGGTTTTGTGGTTATTTCCGGTTGGGCGTGGTGTTCCGTGCTGAG TAGGAGGGCCTTCCGGTCCGTCCCATTTGTAGCCATGGTTTTGTGGTTAC TTCCGGTTTGGCGTAGGGCTCGTTGTGATTGGTCCGCGTAGCCTGGCCTC TTGTTGCACCCCTTATATTCCAGGGAATTAATGACATATGTTTCGCTGTT TTTTTTATTCCAGCTTCCTTTTTTTTGCGAAGTCCGCAACGATTTATTTT CAACTCCGCGTACGAGCGGAGCTTGGATTTCTGTTCGCCGTTCGATATCC GTGAGAGCCTGCGATGCCGGTGAATGGTCATGCTTTTTGTTTTTTCTTTT TTGTGTGCGGTCGAACCTTGTTGGGAGTGTTGCTCATCCTCGATAATCCC GTGGTTGGTAGACGACGCACAGGCGTTCGCATTTTTCGTTCGTGTTCTGC ATCTCGCTAAAATCATACTTCGTGCCACGGGAACCTAATTTGATGTTGCC GTCCCCCATTAGTTTTTGTATATCTTTTTTCTGGTTCCCAAACCGCCGCT CTCTTACTTCGATTTGACTGTGCCGGTATGCCACATACATGCACATACAT TTTCTGTTCAATTAGTCGCGCTGAGACTGTTGTGTTGTCATTGGTCAGCC GGTTTATCTCAGACAATGCTAATGAACACACACACACACACTGACGCCCC CTGACGGGGTCCCAGATCGTGGCCTTTACTGCGGAAGCATTTTCTGTTTT CATCCGCACTAAGTCTGGCGGCTGTTCGTTGGTCGGCCGGTCTATCGCGT TCGACGCTAATAAACACACACACCAACAAACACCTGCGCAGTACGAGAAG AGCGAAGTGGACGACCAGATGGACCTTCTCAGAGCCCAGGCCAAGGGCCA GGAGTTCGATGAGGCCAAGGCTCAGGACAAGATCGAGGCGCAGCTGGAGC GAGAAATGGTGAGGACATGAACAAGAGGTGGCAGTCTACAGCCGTGCGGG TGAAATGTAGTCGGCTTGAGCTGAGAAGGAGATTGGCTTACATGCTTCGT GATGGCGCGTTACACAAAGTCTCCGCCGCCCGCCTTCTGAATGAAATTCA GTAGACCGTGGCGGCAGGAGTCGCCGTTGTGGCGCGGCCAATCCTCGACT CCTAATGTAGGGAAAAAAAACGCGGCGTCACTTTGGACGTCTGTGGTTGC ACTCAAACGGATAGTCTCTCGTGTTGCATGTATCTTTGCTGCAAAACGAG ATGAAATTTTCCTTGCGGCAGAAAAATGCCATGTGTTTTTTGTGTGTCGA TGATTCTTACGCGGTATCACAAGACTCATGAAACATTATTTGCTGCAAAA CGCTGGTTGTGTCGAATTATTCTGACGAACCCAGGTGTTGGACTGGATCG ACGACCGATCAAAGATAACGTGGTTGCCGGCGAAGCCCGTGGAGAAGGTT GACCTCGAGGAGCTCGGAGTAGTAAATTCGCCATAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7626:81..4566+

>mRNA_Ecto-sp13_S_contig7626.18840.1 ID=mRNA_Ecto-sp13_S_contig7626.18840.1|Name=mRNA_Ecto-sp13_S_contig7626.18840.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=858bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7626:81..4566+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGCCCTTCCGAGAGAACGCGGACGGGTCGAAGGGGGAACAGTTGCC
CAACATCGCGTCCGGGGATGGTGTTGACATCGTCCTCGAGTCCGGCAGAT
ACATGCCCGGTCTGGCGGAGGGCATGGAAGGAGTTAAGGCGGGGGAGACT
AGGGAAATCAGGATCACGTTCCCGGACAAGCTGGGACCCCAGGGGGGCGA
CCTCGAGGGGACTAAGGCCGTCTTCGAGGTGGAAGCCGTCGAGATTAAGA
AACGCAATGTGCCGGAGGTGAACGAAGAGTTCGCGCAAAGCATCCGCGAG
GGCCTGACTCTGGAAGAACTGACGAGGGAGGTGGAAAAGGCGGTCATGGA
GGAGACGGGGACATCCAAGAGGGACACCCGAAACAAGGCCTACGAAGAAG
CTCTCCTGGAGACGTGCTCGATTACCATCCCGGAGACCTTGATCGTGGAG
CAGGCCCGCGAGAAGTTCGCCATCATGATGACCGAGTTTAAGGACCAGGG
GGAGTCGGACGCTAAGATCCAGAGCATGATCACGAAGGAGAACTTCGCCA
AGTACGTGGAGGTGGTGAGGAAAAACGTCACCCGAGGCCTGACTCTGAGC
CTCATGTTCACCCACATCGCCGAGAAGGAGGGCCTTTCGTACGAGAAGAG
CGAAGTGGACGACCAGATGGACCTTCTCAGAGCCCAGGCCAAGGGCCAGG
AGTTCGATGAGGCCAAGGCTCAGGACAAGATCGAGGCGCAGCTGGAGCGA
GAAATGGTGTTGGACTGGATCGACGACCGATCAAAGATAACGTGGTTGCC
GGCGAAGCCCGTGGAGAAGGTTGACCTCGAGGAGCTCGGAGTAGTAAATT
CGCCATAA
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