mRNA_Ecto-sp13_S_contig7624.18835.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: D8LU98_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU98_ECTSI) HSP 1 Score: 758 bits (1956), Expect = 2.000e-275 Identity = 388/410 (94.63%), Postives = 401/410 (97.80%), Query Frame = 1
Query: 13 MKARSSTCRCVRWAQFLVLSTCGNVRVWQAAGFGLGARPSVPVQQKQHIAT-SVTQVLMSESQASDRSNSRRGEGGAEPTGRGDFLRNSAAFLAGGSAAIVGATTAGAGFPSAAEAMGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDRINPGSVVSVAILAEDVEEMAESLGGEVSVDSLRGGGRSVAVADPDGYGVKFVEYNDWRGQLPRLV 1239
MK RSSTCRCVRWAQ LVLSTCG++RVWQAAGFGLGARPSVPVQQKQH AT S TQVLMSESQASDRS+SRRGEGGAEPTGRGDFLRNSAAFLAGGSAAI ATTAGAGFPSAAEA+GDLYEFKDQARFAQHAT+QVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSST+GYGGHFTLELNSQKEE GAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGD+INPGSVVSVA+LAEDVE++AESLGG+VSVDS RGGG+SVAVADPDGYGVKFVEY+DWRGQLPRLV
Sbjct: 1 MKTRSSTCRCVRWAQLLVLSTCGDIRVWQAAGFGLGARPSVPVQQKQHTATCSATQVLMSESQASDRSSSRRGEGGAEPTGRGDFLRNSAAFLAGGSAAIAAATTAGAGFPSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVSVAVLAEDVEKIAESLGGKVSVDSARGGGKSVAVADPDGYGVKFVEYSDWRGQLPRLV 410
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A835YIX3_9STRA (VOC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA) HSP 1 Score: 262 bits (670), Expect = 7.820e-81 Identity = 156/306 (50.98%), Postives = 201/306 (65.69%), Query Frame = 1
Query: 331 AGFPSAAEAMGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNT--TVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREA-GSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDR--INPGSVVS-VAILAEDVEEMAESLGGEVSVDSLRGGGRSVAV-ADPDGYGVKFVEYNDWRGQL 1227
AG P A+G+L E Q RF QHA + VPD+ AA++FY +G+GM+V+R+RA NT T V +GPE L VP + GVSS + YGGHF+LEL DGE FYDPGNGVQ++QIAVD+YRIS+V+ AGG + GYG GL++ L SG RRDP MF+A+KV D+K+SVQWYTDV GM++FP+P+AREA S FEP+QP GSVFM Y+ + GV+LIP K D+ I GS S +A+LA DVE+ + +G + G SVAV ADPDGY VEY+D+ +L
Sbjct: 87 AGSPEGCNAIGELPETLSQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELVGPLN---PPADGELP---FYDPGNGVQYIQIAVDTYRISKVIAAGGEVIFGYG--------GLKINLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREAVDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDVEDEGKRVGA-MYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A4D9D405_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.080e-59 Identity = 138/328 (42.07%), Postives = 196/328 (59.76%), Query Frame = 1
Query: 301 AAIVGATTAGAGFPS---AAEAMGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDR---INPGSVVS-VAILAEDV-----EEMAESLGGEVS-VDSLRGGGRSVAVA-DP-DGYGVKFVEYNDWRGQLPRLV 1239
A ++G++ GA FPS AA A+G+L E+ RF QH + VPDMAAAL FY+DG+ M+V+R+R N+T VG+GPE L+ P + GVSS S YG HF LELN + E+G+ V DPGN +LQ+AV S R+S++ +AGG I+S YG++ V +PGGLR +++ G RRDP M LA+ V D++++ +Y + GM + P+P +R S +EP+QP GS F+A+ + FG++L+P K + + G VV +AIL DV E ++ G +V G G VAV DP G GV VE D +L V
Sbjct: 40 AGVLGSSITGA-FPSRPNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELNEVLK----TEEGDTPV---LDPGNAAAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTQDPVTGLGVVLVEAEDLEKELVGTV 359
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A7S2UZ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ58_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.720e-57 Identity = 113/271 (41.70%), Postives = 160/271 (59.04%), Query Frame = 1
Query: 298 SAAIVGATTAGAGFPSAAEAMGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDRINPGSVVS-VAILAEDVEEMAE 1107
S+AI+G+ G ++G+L EF D A+F QH ++V DM AAL+F + G+ M V+RTR N T VG+GPE L P FV GVSS + YGGHF+LEL S E+ F +PG +Q++Q+A + +++KAGGII GYGY V+AP GL ++ RDP ++A+KVKDMK+S+ +Y V GM K + R S FEP QP GSV M Y + ++LIPA + D I G+V + +AI+ VE++ +
Sbjct: 12 SSAILGSVALSQGLSQPGWSIGELPEFSDDAKFIQHMVVRVEDMDAALEFCLKGLQMSVLRTRLVDGINGTFVGYGPEQLSPPEDFVPGVSSFARYGGHFSLELVSPTTPL------EQRKPFANNPGTALQYIQLAAPNLSFGKLIKAGGIITGGYGYADVIAPFGLPFRVFVADTRDPAQYIAMKVKDMKKSIAYYEKVLGMKKLSYEMLRVKDSSFEPIQPKGSVVMGYNENSCNILLIPATRQDTIEVGNVFAKLAIVTNGVEDIGK 276
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A0G4EHT2_VITBC (VOC domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC) HSP 1 Score: 199 bits (506), Expect = 4.610e-57 Identity = 127/303 (41.91%), Postives = 171/303 (56.44%), Query Frame = 1
Query: 358 MGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLF--NTTVVGFGPEALE---VPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEE--DVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAR-EAGSPFEPEQPAGSVFMAYEGEAFGVVLIPA----AKGDRINPGSVVS-VAILAEDVEEMAESLGGEVSVDSLRGGGRSVAVADPDGYGVKFVEYNDWRGQL 1227
MG L E ++ R+ QHA + VP M AL FY G+GM+VIRTR P N T VG+GPE L+ V F G+SS + YG HFTLEL ++ D E+ V Y+PGNGVQFLQIA+ R+SQ+ + GG I YG+++V APGGL L+++ G RRDP MF VKD+ + +Y GM + P+ +AR SP EP+QP S +M Y + FG++L+ AK I GSV +AIL+ +V E SL + G A D GYG+ VEY+D+ +L
Sbjct: 1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPSLNAGFTGPVPGIGTNVAAFKDAQGYGLVLVEYDDFEKEL 303
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A5B8MYG2_9CHLO (Putative glyoxalase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYG2_9CHLO) HSP 1 Score: 127 bits (318), Expect = 7.220e-29 Identity = 95/289 (32.87%), Postives = 140/289 (48.44%), Query Frame = 1
Query: 394 FAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAV-DSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEG--EAFGVVLIPAAKGDRINPGSVVSVAILAEDVEEMAESLGGEVSVDSLRG-----GGRSVAVADP-DGYGVKFVEYNDWRGQLPR 1233
F QHA L+V D+ ++KF+ G+GMKV RTR N V FGPE L T+ GG F LEL E +D N QF Q A+ +S R+++V +GG I G+GY ++ AP G ++ + +RRDP + V V D+ + ++Y V GM +E G FEP + GSV M Y E G++L+P + + + +A+L +DV E E L G GG V++A P +G + FV+YND+ + P+
Sbjct: 154 FLQHAVLEVKDLDKSVKFWTQGLGMKVNRTRG----NQAFVSFGPETL------------TAADGGKFALEL---VENPSTTQD------------NSGQFFQFALSNSLRVNRVANSGGDITFGFGYFEITAPDGYKVVVYIENRRDPFDLVGVYVNDVDAAAKYYERVFGMAADRSYGDKEVGR-FEPARIKGSVLMTYGAADENTGILLVPKSSSKEASSVQSIKIAVLDKDVNERKEKLVAAGLTPKFTGEVPGTGGTKVSLAVPREGVPLVFVDYNDFEREQPK 410
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A0M0JPX6_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JPX6_9EUKA) HSP 1 Score: 103 bits (258), Expect = 4.680e-21 Identity = 74/237 (31.22%), Postives = 116/237 (48.95%), Query Frame = 1
Query: 394 FAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKL-LSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAR------------EAGSPFEPEQPAGSVFMAYEGEAF--GVVLIPAAKGDRINPGS 1059
F Q + VPDM A+ F+ G G V+ T+ N T +GFGP+++ G F LE+ E ++ G +Q++Q+A+ +R+SQV+K GG I+S YG+ Q+ APGGL L++ + SRRDP F+A++ +K SV Y + G+ K R E +EP++ GS+ M+Y + GV+L+P KG ++ GS
Sbjct: 105 FYQSMRIGVPDMDKAVTFWTKGCGALVLDTKLVNGVNVTRIGFGPQSIRRDD------------GAKFALEMV-------------EGPSTSFETGGVLQYVQLAIPIFRLSQVMKNGGDIQSAYGWTQLTAPGGLPLRVHIDESRRDPFEFVALRTSSLKSSVAHYESL-GLRKVDEKSGRKVELSINKNTIFENSDAYEPDREVGSILMSYGDKKAETGVLLLPPLKGAKLITGS 315
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A7S2H0Q2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2H0Q2_9EUKA) HSP 1 Score: 100 bits (248), Expect = 9.470e-20 Identity = 74/240 (30.83%), Postives = 119/240 (49.58%), Query Frame = 1
Query: 394 FAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKL-LSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMT--------KFPFPRAR-----EAGSPFEPEQPAGSVFMAYEGEAF--GVVLIPAAKGDR-INPGSV 1062
F + + VP++ A++F+ G G ++ +R N T +GFGP++ G F LEL EGA F+ + +Q++Q+A+ +R+SQVV GG I S YG+ +V+APGGL L++ + +RRDP F+A++ +++ + + Y +V GM KF E EPE+ AGSV M + GV+L+P KG + ++PG V
Sbjct: 105 FCRGLRIGVPNLDEAVRFWTSGCGALLLDSRMIDGHNVTTIGFGPQSPRAED------------GAKFALELV-----EGAPT--------FFGDDSPLQYIQLAMPIFRLSQVVAYGGKILSAYGWTEVIAPGGLPLRVRIEETRRDPFEFIALRTSNLRAATKHYEEVLGMNTLSETSRKKFKLESINQNTIFENSDALEPEREAGSVLMTFGAAELTTGVLLLPPTKGRKALDPGFV 319
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A8J5XKT4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKT4_DIALT) HSP 1 Score: 96.3 bits (238), Expect = 3.540e-18 Identity = 64/189 (33.86%), Postives = 100/189 (52.91%), Query Frame = 1
Query: 412 LQVPDMAAALKFYVDGVGMKVIRT-RAGPL-FNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGA-------AEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSP 951
++VPD+AAA +F++DG+ M +R+ R GP VVG+G E L+ GG F+LEL A A D E + ++Q+ V + RIS +V++GG IES YGY++V +PGGL +++++ RRDP F+A++V D++ + +Y GM + P P R P
Sbjct: 131 VRVPDLAAARRFWLDGLKMSELRSSRVGPDGAEGIVVGYGREGLDEDD------------GGKFSLELVQASARAPAPARLALDAPDAE--------AAGALLYVQLRVPNVRISGLVQSGGAIESAYGYVEVTSPGGLAVRVITAPRRDPVEFVALRVPDVEAAAAYYERAFGMRRIPSPPRRTERGP 299
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A7S0IK92_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IK92_9EUKA) HSP 1 Score: 92.4 bits (228), Expect = 6.120e-17 Identity = 69/227 (30.40%), Postives = 113/227 (49.78%), Query Frame = 1
Query: 382 DQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKL-LSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAR---------EAGSPFEPEQPAGSVFMAY-EGEAF-GVVLIP 1026
+++ F Q + V D+ AL F+ +G+G V TR N TVVGFGPE+L G F++EL S G+ +Q++Q+A+ +R+SQ + GG I+S YG+ ++APGG L++ + +RRDP F A++V ++K +V+ + PF + + E FEP++ G+ M+Y + EA GV+L+P
Sbjct: 129 ERSHFLQRLAVPVDDIEGALNFWRNGLGALVRSTRIVDGRNVTVVGFGPESLRAVD------------GAKFSVELVSAPTSV---------------EGSQLQYIQLAMPVFRLSQAMAYGGDIKSAYGWTDLVAPGGTPLRVRIDETRRDPFEFAALRVSNLKAAVRHFEAFGMSAGEPFGKRKLSLLGNTAFEDRDAFEPDRELGATLMSYGDPEASTGVLLLP 328 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7624.18835.1 >prot_Ecto-sp13_S_contig7624.18835.1 ID=prot_Ecto-sp13_S_contig7624.18835.1|Name=mRNA_Ecto-sp13_S_contig7624.18835.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=410bp MKARSSTCRCVRWAQFLVLSTCGNVRVWQAAGFGLGARPSVPVQQKQHIAback to top mRNA from alignment at Ecto-sp13_S_contig7624:1033..2871+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7624.18835.1 ID=mRNA_Ecto-sp13_S_contig7624.18835.1|Name=mRNA_Ecto-sp13_S_contig7624.18835.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1839bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7624:1033..2871+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7624:1033..2871+ >mRNA_Ecto-sp13_S_contig7624.18835.1 ID=mRNA_Ecto-sp13_S_contig7624.18835.1|Name=mRNA_Ecto-sp13_S_contig7624.18835.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1230bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7624:1033..2871+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |