mRNA_Ecto-sp13_S_contig7624.18835.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7624.18835.1
Unique NamemRNA_Ecto-sp13_S_contig7624.18835.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: D8LU98_ECTSI (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU98_ECTSI)

HSP 1 Score: 758 bits (1956), Expect = 2.000e-275
Identity = 388/410 (94.63%), Postives = 401/410 (97.80%), Query Frame = 1
Query:   13 MKARSSTCRCVRWAQFLVLSTCGNVRVWQAAGFGLGARPSVPVQQKQHIAT-SVTQVLMSESQASDRSNSRRGEGGAEPTGRGDFLRNSAAFLAGGSAAIVGATTAGAGFPSAAEAMGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDRINPGSVVSVAILAEDVEEMAESLGGEVSVDSLRGGGRSVAVADPDGYGVKFVEYNDWRGQLPRLV 1239
            MK RSSTCRCVRWAQ LVLSTCG++RVWQAAGFGLGARPSVPVQQKQH AT S TQVLMSESQASDRS+SRRGEGGAEPTGRGDFLRNSAAFLAGGSAAI  ATTAGAGFPSAAEA+GDLYEFKDQARFAQHAT+QVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSST+GYGGHFTLELNSQKEE GAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGD+INPGSVVSVA+LAEDVE++AESLGG+VSVDS RGGG+SVAVADPDGYGVKFVEY+DWRGQLPRLV
Sbjct:    1 MKTRSSTCRCVRWAQLLVLSTCGDIRVWQAAGFGLGARPSVPVQQKQHTATCSATQVLMSESQASDRSSSRRGEGGAEPTGRGDFLRNSAAFLAGGSAAIAAATTAGAGFPSAAEAIGDLYEFKDQARFAQHATVQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTNGYGGHFTLELNSQKEEAGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDQINPGSVVSVAVLAEDVEKIAESLGGKVSVDSARGGGKSVAVADPDGYGVKFVEYSDWRGQLPRLV 410          
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A835YIX3_9STRA (VOC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIX3_9STRA)

HSP 1 Score: 262 bits (670), Expect = 7.820e-81
Identity = 156/306 (50.98%), Postives = 201/306 (65.69%), Query Frame = 1
Query:  331 AGFPSAAEAMGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNT--TVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREA-GSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDR--INPGSVVS-VAILAEDVEEMAESLGGEVSVDSLRGGGRSVAV-ADPDGYGVKFVEYNDWRGQL 1227
            AG P    A+G+L E   Q RF QHA + VPD+ AA++FY +G+GM+V+R+RA    NT  T V +GPE L VP  +  GVSS + YGGHF+LEL           DGE     FYDPGNGVQ++QIAVD+YRIS+V+ AGG +  GYG        GL++ L SG RRDP MF+A+KV D+K+SVQWYTDV GM++FP+P+AREA  S FEP+QP GSVFM Y+ +  GV+LIP  K D+  I  GS  S +A+LA DVE+  + +G  +      G   SVAV ADPDGY    VEY+D+  +L
Sbjct:   87 AGSPEGCNAIGELPETLSQKRFVQHAVVNVPDIEAAIRFYTEGLGMRVVRSRADTSANTNTTFVAYGPEQLTVPKDWAPGVSSFAAYGGHFSLELVGPLN---PPADGELP---FYDPGNGVQYIQIAVDTYRISKVIAAGGEVIFGYG--------GLKINLFSGVRRDPMMFVALKVSDLKKSVQWYTDVLGMSQFPYPKAREAVDSVFEPKQPKGSVFMGYDEDGSGVLLIPKDKKDKAPIVVGSAYSKLAVLATDVEDEGKRVGA-MYAGKAPGTSTSVAVVADPDGYTTVLVEYDDFAREL 377          
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A4D9D405_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D405_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.080e-59
Identity = 138/328 (42.07%), Postives = 196/328 (59.76%), Query Frame = 1
Query:  301 AAIVGATTAGAGFPS---AAEAMGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDR---INPGSVVS-VAILAEDV-----EEMAESLGGEVS-VDSLRGGGRSVAVA-DP-DGYGVKFVEYNDWRGQLPRLV 1239
            A ++G++  GA FPS   AA A+G+L E+    RF QH  + VPDMAAAL FY+DG+ M+V+R+R     N+T VG+GPE L+ P  +  GVSS S YG HF LELN   +     E+G+  V    DPGN   +LQ+AV S R+S++ +AGG I+S YG++ V +PGGLR +++ G RRDP M LA+ V D++++  +Y +  GM + P+P +R   S +EP+QP GS F+A+  + FG++L+P  K +    +  G VV  +AIL  DV      E  ++ G +V       G G  VAV  DP  G GV  VE  D   +L   V
Sbjct:   40 AGVLGSSITGA-FPSRPNAANAIGELPEWASNPRFTQHLVINVPDMAAALSFYIDGLQMQVLRSRLVGGQNSTFVGYGPETLKTPKGWYPGVSSFSMYGAHFALELNEVLK----TEEGDTPV---LDPGNAAAYLQLAVPSLRLSKLAEAGGKIKSAYGWVLVDSPGGLRHQVIVGMRRDPIMMLALNVPDVQKASHFYVNSLGMQEQPYPLSRIPESIYEPKQPKGSRFLAFNEDGFGILLLPLPKKEAKAGVRLGGVVDKLAILGTDVVGKGGAEDWKASGVDVKFAGEAPGIGTKVAVTQDPVTGLGVVLVEAEDLEKELVGTV 359          
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A7S2UZ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ58_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.720e-57
Identity = 113/271 (41.70%), Postives = 160/271 (59.04%), Query Frame = 1
Query:  298 SAAIVGATTAGAGFPSAAEAMGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDRINPGSVVS-VAILAEDVEEMAE 1107
            S+AI+G+     G      ++G+L EF D A+F QH  ++V DM AAL+F + G+ M V+RTR     N T VG+GPE L  P  FV GVSS + YGGHF+LEL S           E+   F  +PG  +Q++Q+A  +    +++KAGGII  GYGY  V+AP GL  ++     RDP  ++A+KVKDMK+S+ +Y  V GM K  +   R   S FEP QP GSV M Y   +  ++LIPA + D I  G+V + +AI+   VE++ +
Sbjct:   12 SSAILGSVALSQGLSQPGWSIGELPEFSDDAKFIQHMVVRVEDMDAALEFCLKGLQMSVLRTRLVDGINGTFVGYGPEQLSPPEDFVPGVSSFARYGGHFSLELVSPTTPL------EQRKPFANNPGTALQYIQLAAPNLSFGKLIKAGGIITGGYGYADVIAPFGLPFRVFVADTRDPAQYIAMKVKDMKKSIAYYEKVLGMKKLSYEMLRVKDSSFEPIQPKGSVVMGYNENSCNILLIPATRQDTIEVGNVFAKLAIVTNGVEDIGK 276          
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A0G4EHT2_VITBC (VOC domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHT2_VITBC)

HSP 1 Score: 199 bits (506), Expect = 4.610e-57
Identity = 127/303 (41.91%), Postives = 171/303 (56.44%), Query Frame = 1
Query:  358 MGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLF--NTTVVGFGPEALE---VPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEE--DVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAR-EAGSPFEPEQPAGSVFMAYEGEAFGVVLIPA----AKGDRINPGSVVS-VAILAEDVEEMAESLGGEVSVDSLRGGGRSVAVADPDGYGVKFVEYNDWRGQL 1227
            MG L E ++  R+ QHA + VP M  AL FY  G+GM+VIRTR  P    N T VG+GPE L+   V   F  G+SS + YG HFTLEL  ++       D E+   V   Y+PGNGVQFLQIA+   R+SQ+ + GG I   YG+++V APGGL L+++ G RRDP MF    VKD+  +  +Y    GM + P+ +AR    SP EP+QP  S +M Y  + FG++L+      AK   I  GSV   +AIL+ +V E   SL    +      G    A  D  GYG+  VEY+D+  +L
Sbjct:    1 MGTLPETQNLERYIQHAVVNVPKMDDALNFYTRGLGMRVIRTRTNPAKTNNVTFVGYGPETLDLKRVENGFRPGISSYNEYGAHFTLELIEKRVPPELKSDDEDAQPVVQAYEPGNGVQFLQIALPFLRVSQLAETGGNIRRAYGWIEVDAPGGLPLRIIIGERRDPFMFACFTVKDLSAAKSFYETRLGMRELPYQKARYNPDSPLEPKQPQESAYMGYSEDTFGLLLVQQDKKIAKKTPIEVGSVFDKLAILSRNVVEEGPSLNAGFTGPVPGIGTNVAAFKDAQGYGLVLVEYDDFEKEL 303          
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A5B8MYG2_9CHLO (Putative glyoxalase n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYG2_9CHLO)

HSP 1 Score: 127 bits (318), Expect = 7.220e-29
Identity = 95/289 (32.87%), Postives = 140/289 (48.44%), Query Frame = 1
Query:  394 FAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAV-DSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSPFEPEQPAGSVFMAYEG--EAFGVVLIPAAKGDRINPGSVVSVAILAEDVEEMAESLGGEVSVDSLRG-----GGRSVAVADP-DGYGVKFVEYNDWRGQLPR 1233
            F QHA L+V D+  ++KF+  G+GMKV RTR     N   V FGPE L            T+  GG F LEL    E     +D            N  QF Q A+ +S R+++V  +GG I  G+GY ++ AP G ++ +   +RRDP   + V V D+  + ++Y  V GM        +E G  FEP +  GSV M Y    E  G++L+P +     +    + +A+L +DV E  E L          G     GG  V++A P +G  + FV+YND+  + P+
Sbjct:  154 FLQHAVLEVKDLDKSVKFWTQGLGMKVNRTRG----NQAFVSFGPETL------------TAADGGKFALEL---VENPSTTQD------------NSGQFFQFALSNSLRVNRVANSGGDITFGFGYFEITAPDGYKVVVYIENRRDPFDLVGVYVNDVDAAAKYYERVFGMAADRSYGDKEVGR-FEPARIKGSVLMTYGAADENTGILLVPKSSSKEASSVQSIKIAVLDKDVNERKEKLVAAGLTPKFTGEVPGTGGTKVSLAVPREGVPLVFVDYNDFEREQPK 410          
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A0M0JPX6_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JPX6_9EUKA)

HSP 1 Score: 103 bits (258), Expect = 4.680e-21
Identity = 74/237 (31.22%), Postives = 116/237 (48.95%), Query Frame = 1
Query:  394 FAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKL-LSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAR------------EAGSPFEPEQPAGSVFMAYEGEAF--GVVLIPAAKGDRINPGS 1059
            F Q   + VPDM  A+ F+  G G  V+ T+     N T +GFGP+++                G  F LE+              E     ++ G  +Q++Q+A+  +R+SQV+K GG I+S YG+ Q+ APGGL L++ +  SRRDP  F+A++   +K SV  Y  + G+ K      R            E    +EP++  GS+ M+Y  +    GV+L+P  KG ++  GS
Sbjct:  105 FYQSMRIGVPDMDKAVTFWTKGCGALVLDTKLVNGVNVTRIGFGPQSIRRDD------------GAKFALEMV-------------EGPSTSFETGGVLQYVQLAIPIFRLSQVMKNGGDIQSAYGWTQLTAPGGLPLRVHIDESRRDPFEFVALRTSSLKSSVAHYESL-GLRKVDEKSGRKVELSINKNTIFENSDAYEPDREVGSILMSYGDKKAETGVLLLPPLKGAKLITGS 315          
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A7S2H0Q2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2H0Q2_9EUKA)

HSP 1 Score: 100 bits (248), Expect = 9.470e-20
Identity = 74/240 (30.83%), Postives = 119/240 (49.58%), Query Frame = 1
Query:  394 FAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKL-LSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMT--------KFPFPRAR-----EAGSPFEPEQPAGSVFMAYEGEAF--GVVLIPAAKGDR-INPGSV 1062
            F +   + VP++  A++F+  G G  ++ +R     N T +GFGP++                 G  F LEL      EGA          F+   + +Q++Q+A+  +R+SQVV  GG I S YG+ +V+APGGL L++ +  +RRDP  F+A++  +++ + + Y +V GM         KF           E     EPE+ AGSV M +       GV+L+P  KG + ++PG V
Sbjct:  105 FCRGLRIGVPNLDEAVRFWTSGCGALLLDSRMIDGHNVTTIGFGPQSPRAED------------GAKFALELV-----EGAPT--------FFGDDSPLQYIQLAMPIFRLSQVVAYGGKILSAYGWTEVIAPGGLPLRVRIEETRRDPFEFIALRTSNLRAATKHYEEVLGMNTLSETSRKKFKLESINQNTIFENSDALEPEREAGSVLMTFGAAELTTGVLLLPPTKGRKALDPGFV 319          
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A8J5XKT4_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKT4_DIALT)

HSP 1 Score: 96.3 bits (238), Expect = 3.540e-18
Identity = 64/189 (33.86%), Postives = 100/189 (52.91%), Query Frame = 1
Query:  412 LQVPDMAAALKFYVDGVGMKVIRT-RAGPL-FNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGA-------AEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAREAGSP 951
            ++VPD+AAA +F++DG+ M  +R+ R GP      VVG+G E L+               GG F+LEL        A       A D E            + ++Q+ V + RIS +V++GG IES YGY++V +PGGL +++++  RRDP  F+A++V D++ +  +Y    GM + P P  R    P
Sbjct:  131 VRVPDLAAARRFWLDGLKMSELRSSRVGPDGAEGIVVGYGREGLDEDD------------GGKFSLELVQASARAPAPARLALDAPDAE--------AAGALLYVQLRVPNVRISGLVQSGGAIESAYGYVEVTSPGGLAVRVITAPRRDPVEFVALRVPDVEAAAAYYERAFGMRRIPSPPRRTERGP 299          
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Match: A0A7S0IK92_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IK92_9EUKA)

HSP 1 Score: 92.4 bits (228), Expect = 6.120e-17
Identity = 69/227 (30.40%), Postives = 113/227 (49.78%), Query Frame = 1
Query:  382 DQARFAQHATLQVPDMAAALKFYVDGVGMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELNSQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIESGYGYLQVLAPGGLRLKL-LSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMTKFPFPRAR---------EAGSPFEPEQPAGSVFMAY-EGEAF-GVVLIP 1026
            +++ F Q   + V D+  AL F+ +G+G  V  TR     N TVVGFGPE+L                G  F++EL S                     G+ +Q++Q+A+  +R+SQ +  GG I+S YG+  ++APGG  L++ +  +RRDP  F A++V ++K +V+ +         PF + +         E    FEP++  G+  M+Y + EA  GV+L+P
Sbjct:  129 ERSHFLQRLAVPVDDIEGALNFWRNGLGALVRSTRIVDGRNVTVVGFGPESLRAVD------------GAKFSVELVSAPTSV---------------EGSQLQYIQLAMPVFRLSQAMAYGGDIKSAYGWTDLVAPGGTPLRVRIDETRRDPFEFAALRVSNLKAAVRHFEAFGMSAGEPFGKRKLSLLGNTAFEDRDAFEPDRELGATLMSYGDPEASTGVLLLP 328          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7624.18835.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LU98_ECTSI2.000e-27594.63VOC domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YIX3_9STRA7.820e-8150.98VOC domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9D405_9STRA1.080e-5942.07Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
A0A7S2UZ58_9STRA1.720e-5741.70Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A0G4EHT2_VITBC4.610e-5741.91VOC domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A5B8MYG2_9CHLO7.220e-2932.87Putative glyoxalase n=3 Tax=Chloropicon primus Tax... [more]
A0A0M0JPX6_9EUKA4.680e-2131.22Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S2H0Q2_9EUKA9.470e-2030.83Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A8J5XKT4_DIALT3.540e-1833.86Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S0IK92_9EUKA6.120e-1730.40Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7624contigEcto-sp13_S_contig7624:1033..2871 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score764.6
Seed ortholog evalue2.3e-218
Seed eggNOG ortholog2880.D8LU98
Model size1242
Hectar predicted targeting categorymitochondrion
Exons2
EggNOG free text desc.methylglyoxal metabolic process
EggNOG OGsCOG0346@1,KOG2943@2759
Cds size1230
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464032.2356203-UTR-Ecto-sp13_S_contig7624:1032..10441681464032.2356203-UTR-Ecto-sp13_S_contig7624:1032..1044Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7624 1033..1044 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464032.248784-CDS-Ecto-sp13_S_contig7624:1044..11501681464032.248784-CDS-Ecto-sp13_S_contig7624:1044..1150Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7624 1045..1150 +
1681464032.26669-CDS-Ecto-sp13_S_contig7624:1747..28711681464032.26669-CDS-Ecto-sp13_S_contig7624:1747..2871Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7624 1748..2871 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7624.18835.1prot_Ecto-sp13_S_contig7624.18835.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7624 1045..2871 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7624.18835.1

>prot_Ecto-sp13_S_contig7624.18835.1 ID=prot_Ecto-sp13_S_contig7624.18835.1|Name=mRNA_Ecto-sp13_S_contig7624.18835.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=410bp
MKARSSTCRCVRWAQFLVLSTCGNVRVWQAAGFGLGARPSVPVQQKQHIA
TSVTQVLMSESQASDRSNSRRGEGGAEPTGRGDFLRNSAAFLAGGSAAIV
GATTAGAGFPSAAEAMGDLYEFKDQARFAQHATLQVPDMAAALKFYVDGV
GMKVIRTRAGPLFNTTVVGFGPEALEVPPSFVFGVSSTSGYGGHFTLELN
SQKEEEGAAEDGEEDVDFFYDPGNGVQFLQIAVDSYRISQVVKAGGIIES
GYGYLQVLAPGGLRLKLLSGSRRDPPMFLAVKVKDMKRSVQWYTDVAGMT
KFPFPRAREAGSPFEPEQPAGSVFMAYEGEAFGVVLIPAAKGDRINPGSV
VSVAILAEDVEEMAESLGGEVSVDSLRGGGRSVAVADPDGYGVKFVEYND
WRGQLPRLV*
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mRNA from alignment at Ecto-sp13_S_contig7624:1033..2871+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7624.18835.1 ID=mRNA_Ecto-sp13_S_contig7624.18835.1|Name=mRNA_Ecto-sp13_S_contig7624.18835.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1839bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7624:1033..2871+ (Ectocarpus species13 EcNAP12_S_4_19m)
TTGGATCACACGATGAAAGCGCGTTCCAGCACATGCCGCTGCGTGCGATG GGCGCAATTCCTCGTGCTCAGCACGTGCGGAAACGTTCGTGTCTGGCAAG CGGCGGGCTTCGGGTTAGGTGAGTGGCAAGGGCCCTACAACTAGTGGCCT TTTCAGTACGCACCATTCCATTTTCTCTCTCGAAGCAGGTTTGAAAGTGA TCCCACGACCTTGGGCGCCAGCAGTGGCAACCTAAAAGTTTAGTCCGGTG TTGTAGGTATGCGGCGATATCGGTCAACCTTTCTCGGTAAGGTGGTCTAG AGCGAAATACCCCGTTCAGTCTCTCGCAGTAGATGCAGGCTGCCGTCGCT TTCTTGCGCGCTGTGGCGTTAGCGAGTGACGGGAACCTACGTTTATTTGA GATCGCCCCTCGATCGTTCCCCTTGTTTTTCGTATTTGAACCGTACCTTT TCCCCTGTGTGTTGTAGATGTTTCCCTTGAGAACAGTTTACTGCTGCCGA ACGCTGGGGCGACATTGTACGGGGGTGAGCGGGGCCTCTCTCACCCAGCA AACATGCCAAGAGGTACAAAGATATGGCGGAGAGTGCCTCTTTCAATCCC CTTCGCTCTTCCCTAAGCGTCGGAAACGACTTGCCGGTTTTCTCCCTTGT CTCTGTCTTTTTTTATTCGTCCTTCCTCCCGTTGTTTGTCCTTTCTCAAA CGGTGTGCTCTGCAGGAGCCCGGCCTTCTGTGCCAGTGCAACAAAAGCAG CACATAGCAACGTCGGTGACACAGGTGCTCATGTCGGAGTCACAAGCATC TGATAGAAGCAACAGCAGAAGAGGGGAAGGAGGAGCCGAGCCTACAGGCA GAGGAGATTTCCTGCGCAATTCCGCTGCGTTTCTCGCAGGAGGCAGCGCC GCAATCGTGGGGGCAACAACAGCGGGGGCTGGCTTCCCGAGCGCCGCCGA GGCCATGGGAGACCTATACGAGTTCAAGGACCAGGCGCGCTTCGCCCAGC ACGCCACCCTTCAGGTGCCGGACATGGCAGCCGCGCTCAAGTTCTACGTG GACGGCGTCGGCATGAAGGTGATCCGCACGCGGGCGGGTCCCCTGTTCAA CACGACCGTCGTCGGGTTCGGCCCGGAGGCGCTCGAGGTGCCGCCGTCCT TCGTTTTCGGCGTGAGCTCCACGAGCGGGTACGGGGGCCACTTCACCCTG GAGCTCAACTCGCAGAAGGAGGAGGAGGGGGCGGCGGAGGACGGGGAAGA GGACGTCGACTTCTTTTACGACCCCGGAAACGGCGTCCAGTTCCTGCAGA TCGCGGTCGACTCGTACCGGATATCCCAGGTGGTCAAGGCCGGGGGAATC ATCGAGTCCGGTTACGGGTACCTCCAGGTCTTGGCTCCAGGAGGGCTTCG GCTGAAGCTCTTGAGCGGCTCGAGACGAGACCCTCCCATGTTCCTCGCCG TCAAGGTGAAGGACATGAAGAGGTCGGTGCAATGGTACACCGACGTCGCT GGAATGACCAAGTTCCCGTTCCCGAGGGCCCGGGAGGCCGGCTCGCCCTT CGAGCCGGAGCAGCCCGCGGGAAGTGTCTTCATGGCCTACGAGGGGGAGG CGTTCGGAGTCGTCCTTATCCCCGCCGCGAAGGGGGACCGGATCAACCCG GGCAGCGTCGTGTCCGTCGCGATTCTGGCGGAGGACGTCGAGGAGATGGC GGAAAGCCTGGGGGGAGAGGTTAGCGTGGACAGCTTGAGAGGAGGGGGAA GGTCCGTGGCGGTCGCGGACCCGGACGGATACGGAGTGAAGTTCGTGGAG TACAATGACTGGAGGGGACAGCTCCCCCGCTTGGTGTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7624:1033..2871+

>mRNA_Ecto-sp13_S_contig7624.18835.1 ID=mRNA_Ecto-sp13_S_contig7624.18835.1|Name=mRNA_Ecto-sp13_S_contig7624.18835.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1230bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7624:1033..2871+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAAGCGCGTTCCAGCACATGCCGCTGCGTGCGATGGGCGCAATTCCT
CGTGCTCAGCACGTGCGGAAACGTTCGTGTCTGGCAAGCGGCGGGCTTCG
GGTTAGGAGCCCGGCCTTCTGTGCCAGTGCAACAAAAGCAGCACATAGCA
ACGTCGGTGACACAGGTGCTCATGTCGGAGTCACAAGCATCTGATAGAAG
CAACAGCAGAAGAGGGGAAGGAGGAGCCGAGCCTACAGGCAGAGGAGATT
TCCTGCGCAATTCCGCTGCGTTTCTCGCAGGAGGCAGCGCCGCAATCGTG
GGGGCAACAACAGCGGGGGCTGGCTTCCCGAGCGCCGCCGAGGCCATGGG
AGACCTATACGAGTTCAAGGACCAGGCGCGCTTCGCCCAGCACGCCACCC
TTCAGGTGCCGGACATGGCAGCCGCGCTCAAGTTCTACGTGGACGGCGTC
GGCATGAAGGTGATCCGCACGCGGGCGGGTCCCCTGTTCAACACGACCGT
CGTCGGGTTCGGCCCGGAGGCGCTCGAGGTGCCGCCGTCCTTCGTTTTCG
GCGTGAGCTCCACGAGCGGGTACGGGGGCCACTTCACCCTGGAGCTCAAC
TCGCAGAAGGAGGAGGAGGGGGCGGCGGAGGACGGGGAAGAGGACGTCGA
CTTCTTTTACGACCCCGGAAACGGCGTCCAGTTCCTGCAGATCGCGGTCG
ACTCGTACCGGATATCCCAGGTGGTCAAGGCCGGGGGAATCATCGAGTCC
GGTTACGGGTACCTCCAGGTCTTGGCTCCAGGAGGGCTTCGGCTGAAGCT
CTTGAGCGGCTCGAGACGAGACCCTCCCATGTTCCTCGCCGTCAAGGTGA
AGGACATGAAGAGGTCGGTGCAATGGTACACCGACGTCGCTGGAATGACC
AAGTTCCCGTTCCCGAGGGCCCGGGAGGCCGGCTCGCCCTTCGAGCCGGA
GCAGCCCGCGGGAAGTGTCTTCATGGCCTACGAGGGGGAGGCGTTCGGAG
TCGTCCTTATCCCCGCCGCGAAGGGGGACCGGATCAACCCGGGCAGCGTC
GTGTCCGTCGCGATTCTGGCGGAGGACGTCGAGGAGATGGCGGAAAGCCT
GGGGGGAGAGGTTAGCGTGGACAGCTTGAGAGGAGGGGGAAGGTCCGTGG
CGGTCGCGGACCCGGACGGATACGGAGTGAAGTTCGTGGAGTACAATGAC
TGGAGGGGACAGCTCCCCCGCTTGGTGTAG
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