mRNA_Ecto-sp13_S_contig7622.18834.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7622.18834.1
Unique NamemRNA_Ecto-sp13_S_contig7622.18834.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7622.18834.1 vs. uniprot
Match: D7FV90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV90_ECTSI)

HSP 1 Score: 759 bits (1960), Expect = 3.100e-258
Identity = 454/529 (85.82%), Postives = 468/529 (88.47%), Query Frame = 1
Query:    1 MKRRTTGRSTNKLVVAVCCSLSLLRSINGLYTDYELCTGSLATVEDGVCDSSNNIASCLYDGGDCCPSTCVSSAGLCTEDTRQCLNPSASDYPYAEYGNCTAISGHLPYISDGICDEVNNNAECGYDGGDCCPSTCIVSTTDYCPEDNTECVDPFAVDFGYPGFENCTGYPPSMGNGLCIEDNNNAECGYDGGDCCECSCQQGQYMCLGRFDCLDPSFNTTECVTNTTACSPVLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVDTTAAPAVADGNGESRIFGVVNSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGGSALINNSADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSAGSVSWSGSTTFIGNRIYSFGHNGGFSYGGAINAIXXXXXXXXXXXXXXXXXXXVDADDREVVCYGGAVAVDSNXSAIWSGSXXXEXXEACFCGXXXXXXXXXXXXXXXXXXXXXXXXTSGGVVCLEWYSSASWSNSTAFV 1587
            MKR TTGRST +LVVAV C+LSLLRSI+GLYTDYELCTGSLATVEDGVCDSSNNIASCLYDGGDCCPSTCVSSAGLCTEDTRQCLNPSASDYPYAEYGNCTA+SGHLPYISD            GYDGGDCCPSTC+VSTTDYCPEDN+ECVDPFAVDFGYPGFENCTGYPPSMGNGLCI +NN  EC YDGGDCCECSCQ  QYMCLGRFDCLDPSFNTTECVTNTTACSP LSREWLVEDTADAIELANAINCTGGTFDVEWRGSV+VPQTLW+SQGTTVNITGVDTTA+PAVADGNGESRIFGV+NSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSG SAL+NNSADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSA SVSWSG+TTFIGNRIYSFGHNGGFSYGG     XXXXXXXXXXXXXXXXX  VDA DREVVC          X       XXX XXEACFCG           XXXXXXXXXXXXXTSGGV+CLEWYSSASWSNSTAFV
Sbjct:    1 MKRHTTGRSTTRLVVAVWCALSLLRSIDGLYTDYELCTGSLATVEDGVCDSSNNIASCLYDGGDCCPSTCVSSAGLCTEDTRQCLNPSASDYPYAEYGNCTAMSGHLPYISD------------GYDGGDCCPSTCVVSTTDYCPEDNSECVDPFAVDFGYPGFENCTGYPPSMGNGLCIPENNIPECEYDGGDCCECSCQPAQYMCLGRFDCLDPSFNTTECVTNTTACSPDLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVIVPQTLWVSQGTTVNITGVDTTASPAVADGNGESRIFGVINSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGSSALVNNSADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSAASVSWSGNTTFIGNRIYSFGHNGGFSYGGXXXXXXXXXXXXXXXXXXXXXXVDVDAVDREVVCXXXXXXXXXXXXXXXXXXXXXXXXEACFCGGALHANDTGIFXXXXXXXXXXXXXTSGGVLCLEWYSSASWSNSTAFV 517          
BLAST of mRNA_Ecto-sp13_S_contig7622.18834.1 vs. uniprot
Match: A0A6H5JLP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP6_9PHAE)

HSP 1 Score: 590 bits (1521), Expect = 1.250e-194
Identity = 369/414 (89.13%), Postives = 381/414 (92.03%), Query Frame = 1
Query:  361 NAECGYDGGDCCPSTCIVSTTDYCPEDNTECVDPFAVDFGYPGFENCTGYPPSMGNGLCIEDNNNAECGYDGGDCCECSCQQGQYMCLGRFDCLDPSFNTTECVTNTTACSPVLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVDTTAAPAVADGNGESRIFGVVNSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGGSALINNSADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSAGSVSWSGSTTFIGNRIYSFGHNGGFSYGGAINAIXXXXXXXXXXXXXXXXXXXVDADDREVVCYGGAVAVDSNXSAIWSGSXXXEXXEACFCGXXXXXXXXXXXXXXXXXXXXXXXXTS---------GGVVCLEWYSSASWSNS 1575
            +A CGYDGGDCCPSTCIVSTTDYCPEDN++CVDPFAVDFGYPGFE+CTGYPPSMGNGLCI DNN  ECGYDGGDCCECSCQ GQ+MCLGRFDCLDPSFNTTECVTNTTAC+P LSREWLVE+TADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGV TTA+PAVADGNGESRIFGV+NSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGGSAL+NNSADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   IRSAGSVSWSG+TTFIGN+I SFGHNGGFSYGGAINAI XXXXXXXXXXXXXXXX  VDA DREVVCYGGAVAVDSN SAIWSGS   E  EACFCGXXXXXXXXXXXXXXXXXXXXXX  TS         GG VCLEWYSSASWSNS
Sbjct:    3 SAFCGYDGGDCCPSTCIVSTTDYCPEDNSQCVDPFAVDFGYPGFEDCTGYPPSMGNGLCIPDNNTPECGYDGGDCCECSCQPGQFMCLGRFDCLDPSFNTTECVTNTTACAPDLSREWLVENTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVATTASPAVADGNGESRIFGVINSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGGSALVNNSADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAILIRSAGSVSWSGNTTFIGNQINSFGHNGGFSYGGAINAILXXXXXXXXXXXXXXXXIHVDAVDREVVCYGGAVAVDSNSSAIWSGSTLFEDNEACFCGXXXXXXXXXXXXXXXXXXXXXXQATSXXXXXXXXSGGAVCLEWYSSASWSNS 416          
BLAST of mRNA_Ecto-sp13_S_contig7622.18834.1 vs. uniprot
Match: A0A6H5JMC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC1_9PHAE)

HSP 1 Score: 416 bits (1070), Expect = 1.820e-128
Identity = 323/529 (61.06%), Postives = 335/529 (63.33%), Query Frame = 1
Query:    1 MKRRTTGRSTNKLVVAVCCSLSLLRSINGLYTDYELCTGSLATVEDGVCDSSNNIASCLYDGGDCCPSTCVSSAGLCTEDTRQCLNPSASDYPYAEYGNCTAISGHLPYISDGICDEVNNNAECGYDGGDCCPSTCIVSTTDYCPEDNTECVDPFAVDFGYPGFENCTGYPPSMGNGLCIEDNNNAECGYDGGDCCECSCQQGQYMCLGRFDCLDPSFNTTECVTNTTACSPVLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVDTTAAPAVADGNGESRIFGVVNSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGGSALINNSADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSAGSVSWSGSTTFIGNRIYSFGHNGGFSYGGAINAIXXXXXXXXXXXXXXXXXXXVDADDREVVCYGGAVAVDSNXSAIWSGSXXXEXXEACFCGXXXXXXXXXXXXXXXXXXXXXXXXTSGGVVCLEWYSSASWSNSTAFV 1587
            MK R TGRST +LVV VCC+LS LRSI+GLYTDYELCTGSLATVEDGVCDSSNNIASCLYDGGDCCPSTCVSSAGLCTEDTRQCLNPSASDYPY +Y +CTAI G+LPYISDG+                                                                                                                                                                             DTTA+PAVADGNGESRIFGV+NSSLNLHGMTLSNGHGV GGAIFSALGTVTFSGGSAL+NNSADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  IRSAGSVSWSG+TTFIGNRIYSFGHNGGFSYGGAINAI XXXXXXXXXXXXXXXX  +DA DREVVCYGGAVAVDSN SAIWSGS   E  EACFCGXXXXXXXXXXXXXXXXXXXXXXXXTSGGVVCLEWYSSASWSNSTAFV
Sbjct:    1 MKHRATGRSTTRLVVVVCCALSPLRSIDGLYTDYELCTGSLATVEDGVCDSSNNIASCLYDGGDCCPSTCVSSAGLCTEDTRQCLNPSASDYPYEDYEDCTAILGNLPYISDGV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTTASPAVADGNGESRIFGVINSSLNLHGMTLSNGHGVAGGAIFSALGTVTFSGGSALVNNSADEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILIRSAGSVSWSGNTTFIGNRIYSFGHNGGFSYGGAINAILXXXXXXXXXXXXXXXXIDIDAVDREVVCYGGAVAVDSNSSAIWSGSTLFEDNEACFCGXXXXXXXXXXXXXXXXXXXXXXXXTSGGVVCLEWYSSASWSNSTAFV 356          
BLAST of mRNA_Ecto-sp13_S_contig7622.18834.1 vs. uniprot
Match: A0A6H5JRW7_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW7_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 1.440e-58
Identity = 96/113 (84.96%), Postives = 102/113 (90.27%), Query Frame = 1
Query:    1 MKRRTTGRSTNKLVVAVCCSLSLLRSINGLYTDYELCTGSLATVEDGVCDSSNNIASCLYDGGDCCPSTCVSSAGLCTEDTRQCLNPSASDYPYAEYGNCTAISGHLPYISDG 339
            MKRR TGRS  +LVVAVCC+LSL RSI+GLYTDYELCTGS ATVEDGVCDSSNNIASCLYDGGDCCPSTCVSSAGLCTEDTR CLNPSASDY Y +  +CTA SG+LPYISDG
Sbjct:    1 MKRRATGRSITRLVVAVCCALSLSRSIDGLYTDYELCTGSRATVEDGVCDSSNNIASCLYDGGDCCPSTCVSSAGLCTEDTRHCLNPSASDYQYEDVPDCTASSGNLPYISDG 113          
BLAST of mRNA_Ecto-sp13_S_contig7622.18834.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 2.960e-49
Identity = 128/329 (38.91%), Postives = 178/329 (54.10%), Query Frame = 1
Query:   61 LSLLRSINGLYTDYELCTGSLAT-VEDGVCDSSNNIASCLYDGGDCCPSTCVSSA-GLCTEDTRQCLNPSASDYPYAEYGNCTAISGHLPYISDGICDEVNNNAECGYDGGDCCPSTCIVSTTDYCPEDNT-ECVDPFAVDFGYPG-FENCTGYPPSMGNGLCIEDNNNAECGYDGGDCCECSCQQGQYMCLGRFDCLDPSF--NTTECVT---NTTACSPVLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVDTTAAPAVADGNGESRIFGVVNSSLNLHGMTLSNGHGVVGGAIFSALGTVTFS 1020
            L LLRS  G+   Y+ CTG   T + +G CD++ N+ASC YDGGDCC  TC      LC +    C+ P   D P     +            DG+C+E NN+A CGYDGGDCC  +C+      C   +  +C DP   D      F +CTG    +G+G C  +NN A CGYDGGD              G  DC+DPS      EC      TT C       W+V D+  A+ LA A+NC+GG+F+VEW G+V+V +T++++ GT + ITG     + A  DGN  +R+F VVN++L++ G+ LS+G  + GGAI +   T+TF+
Sbjct:   19 LCLLRS--GI-AQYDSCTGGNVTDIGNGNCDAALNVASCGYDGGDCCSCTCNDGPLHLCADSDFDCMYPDCGD-PAVTSSDAVCYED---VQGDGMCNEENNSAACGYDGGDCCECSCVDGPLFECGSFSIFDCRDPACYDPALVAEFPDCTGDWFKIGDGACNPENNIASCGYDGGD-------------GGELDCVDPSAPEELYECEAPPITTTPCPADSEWNWVVGDSEQALALALAVNCSGGSFEVEWVGTVVVNETIFVTDGTVLTITGA--AGSNAALDGNSVTRLFTVVNAALHVSGINLSHGASISGGAIAAGGSTLTFN 325          
BLAST of mRNA_Ecto-sp13_S_contig7622.18834.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 6.280e-48
Identity = 120/315 (38.10%), Postives = 164/315 (52.06%), Query Frame = 1
Query:  133 EDGVCDSSNNIASCLYDGGDCCPSTCVSSAGL-CTEDTRQCLNPSASDYPYAEYGNCTAISGHLPYISDGICDEVNNNAECGYDGGDCCPSTCIVSTTDYCPEDNTECVDPFAVDFGYPG-FENCTGYPPSMGNGLCIEDNNNAECGYDGGDCCECSCQQGQYMCLGRFDCLDPSFNTT-ECVTN---TTACSPVLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVDTTAAPAVADGNGESRIFGVVNSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGGSALINNSADEH 1059
            +DG CD  NN  SC YDGGDCC  +C+      C      CL+P   +       N T       +++DG CD  NN   C YDGGDCC  +C+      C  +   C+DP   D      F +C      +G+G C  + N A CG+DGGDCC CSC  G    +  FDC DP+ +   EC      T  CS  +   WLVE    A  LA A+NC+G +F+VEWRG V +   ++I  GT + ITG     A +V DGN  +R+F V N+ L+L  + +SNG  +VGGAI +A  ++TF+G +  + N A  +
Sbjct:   93 KDGFCDLVNNHPSCDYDGGDCCECSCIDGPDYGCGSIGFACLDPDCGNTTETAPENTTCEES---WMNDGYCDSSNNYPSCDYDGGDCCECSCVDGHDYECGSNGFSCLDPACFDPALVAEFPDCDAGWLGLGDGFCDSELNTASCGWDGGDCCVCSCN-GTACSISDFDCFDPNADEFFECQAPPPATLPCSVEVQLTWLVETPLQAQTLAAAVNCSG-SFEVEWRGRVAIVDPIYIGGGTVLTITG---DGASSVIDGNTLTRLFTVNNAVLHLSNLNISNGASIVGGAIAAANSSLTFNG-TNFVGNQATRY 398          
BLAST of mRNA_Ecto-sp13_S_contig7622.18834.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.490e-45
Identity = 116/298 (38.93%), Postives = 163/298 (54.70%), Query Frame = 1
Query:  190 DCCPSTCVSSAGLCTEDTRQCLNPSASDYPYAEYGNCTAISGHLPYISDGICDEVNNNAECGYDGGDCCPSTCIVSTT-DY-CPEDNTECVDPFAVDFGYPG-FENCTGYPPSMGNGLCIEDNNNAECGYDGGDCCECSCQQGQYMCLGRFDCLDPSFNTT--ECVTN---TTACSPVLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVDTTAAPAVADGNGESRIFGVVNSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGGSALINNSADEH 1059
            D C   C SS  LC +    CL          E   C        +  D  CDE+NNN  C YDGGDCC  +C  S++ +Y C E+   C D   +D      F +CTG   ++G+G C E NNN  CGYDGGDCC CSCQ G       F+CLDPS +    +C  +      C+    + W+VE +A A  LA A+NC+GG F+VEWRG V+V +   +  GT + ++G D++A   V +GN  +RIF VVN++L L G+ +S G   VGGAI +A  ++T +G ++ + N+A  +
Sbjct:   25 DGCKGNCTSSL-LCEDSDFDCLYSDCDPASTTEVATCEES-----WKGDSWCDEINNNPSCDYDGGDCCECSCASSSSAEYSCGENGFNCRDTTCLDLSLVAEFPDCTGDYLTVGDGSCSEANNNDLCGYDGGDCCVCSCQ-GVNCMTTSFECLDPSASEELHDCEPSPPLALPCTADAQQTWVVESSAQAQALAAAVNCSGGLFEVEWRGRVVVGEPFNVVDGTVLTVSGADSSA---VVEGNASTRIFTVVNANLYLSGVNVSYGSSTVGGAIAAARSSLTLNG-TSFVGNAASSY 311          
BLAST of mRNA_Ecto-sp13_S_contig7622.18834.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 2.530e-41
Identity = 119/323 (36.84%), Postives = 163/323 (50.46%), Query Frame = 1
Query:  145 CDSSNNIASCLYDGGDCCPSTCVSSAGLCTEDTRQCLNPSA-SDYPYAEYGNCTAISGHLPYISDGICDEVNNNAECGYDGGDCCPSTCIVSTTDYCPEDNT------ECVDPFAVDFGYPG-FENCTGYPPSMGNGLCIEDNNNAECGYDGGDCCECSCQQGQYMCLGRFDCLDPSFNTT--ECVT---NTTACSPVLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVDTTA-----APAVADGNGESRIFGVVNSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGGSALINNSADEH 1059
            C+   N   C     DCC   C      C      C + +  S    AE  +C   +G    I D  CD  NNN EC YDGGDCC  TC +S    C  D        +C+DP   D      F  CTG    +G+G C E+NNN  CGYDGGDCC CSC     +C G  DCLDPS      EC         CS  + + W+V++  +A  LA A+NC+GG+F+VEW G+V++   + +  GT + ITG  ++      + AV  GN  +R+F VV+++L L  +T++ G   VGGAI +A  T+T    +  I N+A +H
Sbjct:  105 CNMFQNYPECNTLWSDCCEMDCGGDY-YCDTYRFDCSDSTCLSQTVVAENPDC---AGDWLTIGDEFCDSENNNPECAYDGGDCCADTCPLSIDSACGFDGFADYSGFDCLDPAFFDPTVVAEFPECTGSWSMIGDGQCQEENNNPACGYDGGDCCICSCSGT--LCGGLADCLDPSAGDEFYECSPPSPEALPCSAEVQQTWVVDEQEEAHALAAAVNCSGGSFEVEWSGTVVMEMPIVVGAGTVLTITGAGSSTVGDDDSGAVIHGNEGTRLFTVVDAALYLSNITIAFGSSTVGGAIAAAGSTLTLVE-TMFIANTATDH 420          
BLAST of mRNA_Ecto-sp13_S_contig7622.18834.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 3.600e-32
Identity = 82/179 (45.81%), Postives = 110/179 (61.45%), Query Frame = 1
Query:  526 NGLCIEDNNNAECGYDGGDCCECSCQQGQYMC-LGRFDCLDPSFNTTECVTNT---TACSPVLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVDTTAAPAVADGNGESRIFGVVNSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGGSALINNSA 1050
            +G C  +NNNAEC +DGGDCCEC+C   QY C +  F CLDPS         T   T CS      W+VED+A A  LA  +NC+GG+F VEWRGSV +   ++I  GT +N+TG     A AV DGNG +R+F V N++L L G+ L +G   +GGAI ++  T+ F   ++ +NNSA
Sbjct: 1979 DGWCDLENNNAECNWDGGDCCECTCVDSQYECGIQGFSCLDPSATDLYDCGETPAATPCSAEAQEAWVVEDSAQAQALAANVNCSGGSFQVEWRGSVSLDAPIFIVHGTDLNVTGGG--EASAVIDGNGTTRLFSVDNATLRLRGVELRSGFSAIGGAIAASGATLAFHN-TSFVNNSA 2154          
BLAST of mRNA_Ecto-sp13_S_contig7622.18834.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 3.830e-32
Identity = 90/231 (38.96%), Postives = 130/231 (56.28%), Query Frame = 1
Query:  391 CCPSTCIVSTT--DYCPEDNTECVDPFAVDFGYPG-FENCTGYPPSMGNGLCIEDNNNAECGYDGGDCCECSCQQGQYMCLGRFDCLDPSFNTT--ECVTN---TTACSPVLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVDTTAAPAVADGNGESRIFGVVNSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGGSALINNSADEH 1059
            CC  +C  S++    C E+   C D   +D      F +CTG   ++G+G C + NNN  CGYDGGDCC CSCQ G       F+CLDPS N    +C  +      C+    + W+VE +  A  LA A+NC+GG F+VEWRG V+V Q  ++  GT + I+G D++A   V +GN  +RIF VVN+ L L  + +S G    GGAI +A  ++T +G +  + N+A  +
Sbjct:   27 CCECSCASSSSAEHSCGENGFNCRDTTCLDLSLVAEFPDCTGDYLTVGDGSCSKANNNDLCGYDGGDCCVCSCQ-GVNCMRTSFECLDPSANEELHDCEPSPQLALPCTADAQQTWVVESSTQAQALAAAVNCSGGLFEVEWRGRVVVGQPFYVVDGTVLTISGADSSA---VVEGNASTRIFTVVNADLYLSHVNVSYGSSTTGGAIAAARSSLTLNG-TNFVGNTASAY 252          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7622.18834.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV90_ECTSI3.100e-25885.82Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JLP6_9PHAE1.250e-19489.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMC1_9PHAE1.820e-12861.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRW7_9PHAE1.440e-5884.96LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LSC0_ECTSI2.960e-4938.91Polymorphic Outer membrane protein G/I family n=3 ... [more]
D7G5Y7_ECTSI6.280e-4838.10Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5K7Z1_9PHAE1.490e-4538.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTI5_ECTSI2.530e-4136.84Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FHG7_ECTSI3.600e-3245.81LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2X5_ECTSI3.830e-3238.96Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7622contigEcto-sp13_S_contig7622:4799..7375 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score766.1
Seed ortholog evalue1.2e-218
Seed eggNOG ortholog2880.D7FV90
Model size1896
Hectar predicted targeting categorysignal peptide
Exons3
EggNOG OGs2BFIX@1,2S176@2759
Cds size1896
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464032.125058-CDS-Ecto-sp13_S_contig7622:4798..51351681464032.125058-CDS-Ecto-sp13_S_contig7622:4798..5135Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7622 4799..5135 +
1681464032.1379519-CDS-Ecto-sp13_S_contig7622:5411..54471681464032.1379519-CDS-Ecto-sp13_S_contig7622:5411..5447Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7622 5412..5447 +
1681464032.1497138-CDS-Ecto-sp13_S_contig7622:5852..73751681464032.1497138-CDS-Ecto-sp13_S_contig7622:5852..7375Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7622 5853..7375 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7622.18834.1prot_Ecto-sp13_S_contig7622.18834.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7622 4799..7375 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7622.18834.1

>prot_Ecto-sp13_S_contig7622.18834.1 ID=prot_Ecto-sp13_S_contig7622.18834.1|Name=mRNA_Ecto-sp13_S_contig7622.18834.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=632bp
MKRRTTGRSTNKLVVAVCCSLSLLRSINGLYTDYELCTGSLATVEDGVCD
SSNNIASCLYDGGDCCPSTCVSSAGLCTEDTRQCLNPSASDYPYAEYGNC
TAISGHLPYISDGICDEVNNNAECGYDGGDCCPSTCIVSTTDYCPEDNTE
CVDPFAVDFGYPGFENCTGYPPSMGNGLCIEDNNNAECGYDGGDCCECSC
QQGQYMCLGRFDCLDPSFNTTECVTNTTACSPVLSREWLVEDTADAIELA
NAINCTGGTFDVEWRGSVLVPQTLWISQGTTVNITGVDTTAAPAVADGNG
ESRIFGVVNSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGGSALINNSA
DEHGGAMFVDGGAVSWDGDMIIADNSCSWDGGAIFIRSAGSVSWSGSTTF
IGNRIYSFGHNGGFSYGGAINAILESNVSWTEQTSFIDNRIYVDADDREV
VCYGGAVAVDSNSSAIWSGSTSFEDNEACFCGGALHANGTGIFSWTGETV
FSNNQATSGGVVCLEWYSSASWSNSTAFVGNNASEDGGALYVTDMSSVTW
TGDTRFEGNSARNGGAVHVSGTSCPIAWSGETTFEGNVVSGSGGGLFVGE
GAEVNMTGRTDFSNNHADMNGGAVVSALNSVT
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mRNA from alignment at Ecto-sp13_S_contig7622:4799..7375+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7622.18834.1 ID=mRNA_Ecto-sp13_S_contig7622.18834.1|Name=mRNA_Ecto-sp13_S_contig7622.18834.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2577bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7622:4799..7375+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGCGTCGCACCACCGGCAGGTCTACAAACAAGCTCGTGGTCGCTGT CTGCTGTTCCCTCAGTCTATTGCGGAGCATCAATGGCCTCTACACGGACT ATGAGCTATGCACGGGAAGCCTAGCGACTGTCGAAGATGGCGTTTGCGAT AGTTCCAACAACATCGCGTCTTGCTTGTACGACGGAGGCGATTGCTGTCC GAGCACCTGTGTGTCAAGTGCTGGACTGTGTACGGAGGACACGCGGCAAT GCCTGAACCCCTCGGCGAGCGACTACCCCTACGCCGAGTACGGGAACTGT ACGGCTATTTCAGGACACTTGCCTTACATCAGCGACGGTGAGCTAACTTA AATAAAACTTACTTTTTGAGGCGGCGGCCGAACTTAAGGACGGTAGACCG TAGAGCGGTGTTGGAGCTTCTATCCAAGTACTCGCCACGGCAAAGGTGAA ATCGAAGTGTCAGAACCATGCGGTCAATAAACACGCCCAATGCTCTTGAA AGGCAAGGCATACCGTGCTGAGAACTCGTTTCCACGCTCGTTTTGTTCCC TTGTTTGCTACTTTTCCCCTGACATGCCGAACACCGCCATGGACATCTAC GGTCTTCCCTCAGGCATCTGTGACGAAGTGAACAACAACGCCGAGTGCGG TGAGGGAGTTTGACCGATCCGTCAGCACAACAACTAGCACTTTTCGAAGG GTGTTACACGACAGGCTTCCAACCCACGTACCCGTACTACATTGCAGTAC CGATAACTTTGTCCGCAGAAAGATCGCAAACTTAAAAGGACGTCCGCTCT TTGCTTTAGCTTCTTTGTCGCTGTGATTTGTGGGCGTGTACGCACCTTCA CGATCATTTGCACAGAATAAGTGTTCGGGTCATTTCAAGAACCAGTTCAC GACGAGGAGGCACTACATGCCCAGATTAACTCGATACGTCAGGACTTCAC ACTTTCAGTGTGTGTAGCTGTTGGTGTTGTTAACCGTATCATGTATTTTG ACGATGTTTCGTACTGCTGGCGTTCGCAATGGTGTGCCGACCCATGTCTG GCAGGCTACGATGGGGGCGATTGCTGCCCGTCGACATGCATCGTCTCGAC CACCGATTACTGCCCCGAAGATAATACCGAGTGTGTCGACCCATTTGCCG TTGACTTCGGCTATCCGGGTTTCGAGAACTGCACCGGATATCCGCCAAGC ATGGGTAACGGACTATGCATCGAGGATAACAACAACGCGGAATGTGGGTA CGATGGGGGGGACTGCTGCGAGTGCTCGTGCCAACAGGGACAGTATATGT GTCTCGGACGCTTTGACTGCCTAGACCCGTCTTTCAATACCACCGAGTGT GTGACGAACACCACGGCCTGCTCTCCTGTCCTTTCGAGGGAATGGCTGGT GGAGGACACCGCCGACGCAATCGAGTTGGCAAACGCCATCAACTGCACGG GCGGCACGTTTGACGTGGAGTGGCGAGGCAGCGTACTCGTCCCCCAGACG CTGTGGATATCGCAGGGAACTACTGTCAACATCACAGGGGTGGACACCAC AGCGGCTCCAGCTGTTGCAGACGGAAACGGAGAGTCTCGTATCTTCGGCG TGGTCAACTCTTCTCTGAACCTACACGGGATGACACTCTCCAACGGACAC GGCGTCGTAGGTGGGGCTATTTTTAGTGCCTTGGGAACGGTAACATTCAG CGGGGGTAGTGCATTGATCAACAACTCGGCCGATGAGCACGGGGGGGCCA TGTTTGTTGACGGCGGGGCGGTGTCTTGGGACGGTGACATGATAATTGCT GATAACTCATGTTCCTGGGATGGAGGCGCCATTTTCATCCGCAGTGCTGG GTCTGTGTCATGGAGCGGCAGCACGACTTTCATCGGCAACCGAATCTACA GTTTCGGCCACAACGGTGGCTTTAGCTATGGCGGAGCTATCAATGCTATA CTCGAGTCCAACGTTTCTTGGACCGAACAGACGAGCTTCATTGATAACCG CATATATGTCGATGCAGACGACCGTGAGGTGGTGTGCTACGGCGGGGCCG TGGCGGTGGACTCGAACAGCTCGGCAATCTGGAGTGGGAGTACATCGTTC GAGGATAACGAGGCGTGTTTTTGCGGTGGCGCTTTGCACGCAAATGGCAC TGGCATTTTCTCATGGACGGGAGAAACAGTTTTTTCCAACAACCAAGCAA CGAGCGGTGGCGTTGTTTGCTTGGAGTGGTACTCAAGTGCTTCCTGGTCC AATTCGACAGCCTTCGTGGGCAACAATGCCAGCGAGGACGGGGGCGCTCT CTACGTAACAGATATGTCGTCCGTTACTTGGACTGGGGACACCAGGTTTG AGGGAAACAGCGCGAGGAATGGCGGTGCGGTTCATGTCAGTGGTACCTCC TGTCCCATAGCGTGGAGTGGAGAGACGACTTTCGAAGGAAACGTTGTATC TGGATCTGGTGGTGGTCTGTTTGTAGGAGAGGGCGCGGAGGTAAATATGA CCGGACGGACGGACTTCTCGAATAATCACGCCGACATGAACGGGGGCGCC GTGGTATCGGCCTTGAACAGTGTCACA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7622:4799..7375+

>mRNA_Ecto-sp13_S_contig7622.18834.1 ID=mRNA_Ecto-sp13_S_contig7622.18834.1|Name=mRNA_Ecto-sp13_S_contig7622.18834.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1896bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7622:4799..7375+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGCGTCGCACCACCGGCAGGTCTACAAACAAGCTCGTGGTCGCTGT
CTGCTGTTCCCTCAGTCTATTGCGGAGCATCAATGGCCTCTACACGGACT
ATGAGCTATGCACGGGAAGCCTAGCGACTGTCGAAGATGGCGTTTGCGAT
AGTTCCAACAACATCGCGTCTTGCTTGTACGACGGAGGCGATTGCTGTCC
GAGCACCTGTGTGTCAAGTGCTGGACTGTGTACGGAGGACACGCGGCAAT
GCCTGAACCCCTCGGCGAGCGACTACCCCTACGCCGAGTACGGGAACTGT
ACGGCTATTTCAGGACACTTGCCTTACATCAGCGACGGCATCTGTGACGA
AGTGAACAACAACGCCGAGTGCGGCTACGATGGGGGCGATTGCTGCCCGT
CGACATGCATCGTCTCGACCACCGATTACTGCCCCGAAGATAATACCGAG
TGTGTCGACCCATTTGCCGTTGACTTCGGCTATCCGGGTTTCGAGAACTG
CACCGGATATCCGCCAAGCATGGGTAACGGACTATGCATCGAGGATAACA
ACAACGCGGAATGTGGGTACGATGGGGGGGACTGCTGCGAGTGCTCGTGC
CAACAGGGACAGTATATGTGTCTCGGACGCTTTGACTGCCTAGACCCGTC
TTTCAATACCACCGAGTGTGTGACGAACACCACGGCCTGCTCTCCTGTCC
TTTCGAGGGAATGGCTGGTGGAGGACACCGCCGACGCAATCGAGTTGGCA
AACGCCATCAACTGCACGGGCGGCACGTTTGACGTGGAGTGGCGAGGCAG
CGTACTCGTCCCCCAGACGCTGTGGATATCGCAGGGAACTACTGTCAACA
TCACAGGGGTGGACACCACAGCGGCTCCAGCTGTTGCAGACGGAAACGGA
GAGTCTCGTATCTTCGGCGTGGTCAACTCTTCTCTGAACCTACACGGGAT
GACACTCTCCAACGGACACGGCGTCGTAGGTGGGGCTATTTTTAGTGCCT
TGGGAACGGTAACATTCAGCGGGGGTAGTGCATTGATCAACAACTCGGCC
GATGAGCACGGGGGGGCCATGTTTGTTGACGGCGGGGCGGTGTCTTGGGA
CGGTGACATGATAATTGCTGATAACTCATGTTCCTGGGATGGAGGCGCCA
TTTTCATCCGCAGTGCTGGGTCTGTGTCATGGAGCGGCAGCACGACTTTC
ATCGGCAACCGAATCTACAGTTTCGGCCACAACGGTGGCTTTAGCTATGG
CGGAGCTATCAATGCTATACTCGAGTCCAACGTTTCTTGGACCGAACAGA
CGAGCTTCATTGATAACCGCATATATGTCGATGCAGACGACCGTGAGGTG
GTGTGCTACGGCGGGGCCGTGGCGGTGGACTCGAACAGCTCGGCAATCTG
GAGTGGGAGTACATCGTTCGAGGATAACGAGGCGTGTTTTTGCGGTGGCG
CTTTGCACGCAAATGGCACTGGCATTTTCTCATGGACGGGAGAAACAGTT
TTTTCCAACAACCAAGCAACGAGCGGTGGCGTTGTTTGCTTGGAGTGGTA
CTCAAGTGCTTCCTGGTCCAATTCGACAGCCTTCGTGGGCAACAATGCCA
GCGAGGACGGGGGCGCTCTCTACGTAACAGATATGTCGTCCGTTACTTGG
ACTGGGGACACCAGGTTTGAGGGAAACAGCGCGAGGAATGGCGGTGCGGT
TCATGTCAGTGGTACCTCCTGTCCCATAGCGTGGAGTGGAGAGACGACTT
TCGAAGGAAACGTTGTATCTGGATCTGGTGGTGGTCTGTTTGTAGGAGAG
GGCGCGGAGGTAAATATGACCGGACGGACGGACTTCTCGAATAATCACGC
CGACATGAACGGGGGCGCCGTGGTATCGGCCTTGAACAGTGTCACA
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