prot_Ecto-sp13_S_contig7621.18833.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7621.18833.1
Unique Nameprot_Ecto-sp13_S_contig7621.18833.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length792
Homology
BLAST of mRNA_Ecto-sp13_S_contig7621.18833.1 vs. uniprot
Match: A0A6H5KXS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS4_9PHAE)

HSP 1 Score: 557 bits (1435), Expect = 5.010e-184
Identity = 433/567 (76.37%), Postives = 440/567 (77.60%), Query Frame = 0
Query:  228 DDYNGAGADYRKVARVYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SCPPDLGTAAKEYVAQQRQSLLLHQGETMTPAAAAGIGTRPLEAIAAGQQXXXXXXXXXXXRLEPYPGDDQAVHQRHSLVRSFSAEQRRFQTILQQQRQQPQLRQMLPXXXXXXXXXXXXXXXXXXXARTAAPPLASKRPLSWSPRDTRKAPPSSASSSLSSSPSPSMAFPLGAGMAAXXXXXXXXXXXXXXXXXXXXXXHSPAGNVAXXXXXXXXXXGEGRWPRAPMDEATAAFSGSRPFGFGAAQGSGVGVNSALTPSFAFNLPRRADMSPTSGSESGTDAGRTTVATGEYNRSPAAAGGTAPGVSSGGESPTTWPDTALVSRQLPTVEGLLPPPPVTAHGMPSVASLDPHWRRRMPRARKPALFRFGGRAGGSSGGVGGSGCNGGASSQPSSCRWPTFMSRRTATAXXXXXVVSPGTDGDGESFARRGGDHAGGGELLSSASVPRASWLGGNISXXXXXXXXXXVTLHGGRNNDARLAKLSLADRGAGDALGPTLETLELEFVGRKRE 791
            DDYNG G  YRKVARVYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        SC PDLGTAAKEYVAQQRQSLLL QGETMTPA AAGIGTRPLEAI  GQQ           RLEPYPGD QAVHQRH+LVRSFSAE+RRFQTILQ  +Q         XXXXXXXXXXXXXXXXXXX           RPLSWSPRDTR AP              SMAFPLGA MAAXXXXXXXXXXXXXXXXXXXXXX        XXXXXXX   GEGRWPRAPMDEA+A FSGSR FGFGAAQGSGVGVNSA+TPSF+FNLPRRADMSPTSGSESGTD GRTTVA  EYNRSPAAA  TAPGVSSGGESPTTW DTALVSRQLPTVEG LPPPPVTAHGMPSVASLDPHWRR MPRARKPALFRFGG                       SCRWPTFMSR     XXXXX    GTDG GESF+RRGGDHAG  ELLSSASVPRASWLG    XXXXXXXXXX TLHGGRNNDARLAKLSLADRGAGDALGPTLETLELEFVGRKRE
Sbjct:  292 DDYNGDGDGYRKVARVYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLDRRRRSCSPDLGTAAKEYVAQQRQSLLLQQGETMTPAGAAGIGTRPLEAIVTGQQQLLQQPQQRRRRLEPYPGDHQAVHQRHTLVRSFSAEERRFQTILQHPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXRPLSWSPRDTRTAPXXXXXXXXXXXXXXSMAFPLGASMAAXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXRREGEGRWPRAPMDEASATFSGSRSFGFGAAQGSGVGVNSAITPSFSFNLPRRADMSPTSGSESGTDGGRTTVAAEEYNRSPAAAARTAPGVSSGGESPTTWADTALVSRQLPTVEGRLPPPPVTAHGMPSVASLDPHWRRGMPRARKPALFRFGGXX---------XXXXXXXXXXXXSCRWPTFMSRXXXXXXXXXXXXXXGTDGYGESFSRRGGDHAGXXELLSSASVPRASWLGXXXXXXXXXXXXXXXTLHGGRNNDARLAKLSLADRGAGDALGPTLETLELEFVGRKRE 846          
BLAST of mRNA_Ecto-sp13_S_contig7621.18833.1 vs. uniprot
Match: D8LLT2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT2_ECTSI)

HSP 1 Score: 455 bits (1170), Expect = 2.040e-151
Identity = 254/311 (81.67%), Postives = 257/311 (82.64%), Query Frame = 0
Query:  482 SPAGNVAXXXXXXXXXXGEGRWPRAPMDEATAAFSGSRPFGFGAAQGSGVGVNSALTPSFAFNLPRRADMSPTSGSESGTDAGRTTVATGEYNRSPAAAG-GTAPGVSSGGESPTTWPDTALVSRQLPTVEGLLPPPPVTAHGMPSVASLDPHWRRRMPRARKPALFRFGGRAGGSSGGVGGSGCNGGASSQPSSCRWPTFMSRRTATAXXXXXVVSPGTDGDGESFARRGGDHAGGGELLSSASVPRASWLGGNISXXXXXXXXXXVTLHGGRNNDARLAKLSLADRGAGDALGPTLETLELEFVGRKRE 791
            SPAGNVA          GEGRWPRAPMDEATAAFSGSR FGFGAAQ SGVGVNSALTPSF FNLPRRAD SPTSGSESGTD GRTT A  EYNRSPAAA  G A G SSGGESPTTW DTALVSRQLPTVEGLLPPPPVTAHG+PSVASLDPHWRRRMP+ARKPALFRFGGRAG                SQPSSCRWPTFMSRRTAT XXXXXVVSPGTDGDGE FARRGGD AGGGELLSSASVPRASWLGG+IS          VTLHGGRNNDARLAKLSL DRGAGDALGPTLETLELEFVGRKRE
Sbjct:   34 SPAGNVASEEGRGGRGGGEGRWPRAPMDEATAAFSGSRSFGFGAAQSSGVGVNSALTPSFLFNLPRRADTSPTSGSESGTDGGRTTAAAEEYNRSPAAAAAGMAHGASSGGESPTTWADTALVSRQLPTVEGLLPPPPVTAHGVPSVASLDPHWRRRMPKARKPALFRFGGRAGXXXXXXXXXXXXXXXXSQPSSCRWPTFMSRRTATXXXXXXVVSPGTDGDGEPFARRGGDRAGGGELLSSASVPRASWLGGSISSSSLCSSSAVVTLHGGRNNDARLAKLSLTDRGAGDALGPTLETLELEFVGRKRE 344          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7621.18833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KXS4_9PHAE5.010e-18476.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLT2_ECTSI2.040e-15181.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7621contigEcto-sp13_S_contig7621:3816..6903 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7621.18833.1mRNA_Ecto-sp13_S_contig7621.18833.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7621 3816..6903 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7621.18833.1 ID=prot_Ecto-sp13_S_contig7621.18833.1|Name=mRNA_Ecto-sp13_S_contig7621.18833.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=792bp
QEPYFGHIGGKAKFCARHKPHEAMVDVRHRRREFPSCTKQPNYGYEGQRA
CYCSTHKLPTMVDVKHRRCAEDGCRGFSNFAFPGTKEKFCDAHRREGMVP
SGRGRAVTTAAAVTTAAAAAPAPLAPVPAPSSTLATGGGLSSVKAEAAAA
VGGASSSGVAPMMVVASGGVFVATAATAAAAAAAAHGSEDGGRRRACWSE
ERGGGGVADSSSSSSSSSGSPASVMVVDDYNGAGADYRKVARVYEQQQQQ
QHKQEEGSAAAMAHSSAGGPVASLLDRRRRSCPPDLGTAAKEYVAQQRQS
LLLHQGETMTPAAAAGIGTRPLEAIAAGQQQLLQQPQQQRRRLEPYPGDD
QAVHQRHSLVRSFSAEQRRFQTILQQQRQQPQLRQMLPLPIPFSFGGGGG
VDAASASARTAAPPLASKRPLSWSPRDTRKAPPSSASSSLSSSPSPSMAF
PLGAGMAAAAGGRDGGGDGSSARSSAASREHSPAGNVASEEGGGGRGGGE
GRWPRAPMDEATAAFSGSRPFGFGAAQGSGVGVNSALTPSFAFNLPRRAD
MSPTSGSESGTDAGRTTVATGEYNRSPAAAGGTAPGVSSGGESPTTWPDT
ALVSRQLPTVEGLLPPPPVTAHGMPSVASLDPHWRRRMPRARKPALFRFG
GRAGGSSGGVGGSGCNGGASSQPSSCRWPTFMSRRTATAAAAAAVVSPGT
DGDGESFARRGGDHAGGGELLSSASVPRASWLGGNISSSSSCSSSAVVTL
HGGRNNDARLAKLSLADRGAGDALGPTLETLELEFVGRKRE*
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