prot_Ecto-sp13_S_contig76181.18828.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig76181.18828.1
Unique Nameprot_Ecto-sp13_S_contig76181.18828.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length42
Homology
BLAST of mRNA_Ecto-sp13_S_contig76181.18828.1 vs. uniprot
Match: D7FYI5_ECTSI (F-actin-capping protein subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYI5_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.020e-18
Identity = 42/42 (100.00%), Postives = 42/42 (100.00%), Query Frame = 0
Query:    1 YTVAVGAGSAEVCGAITVRGHYFENGNIQLQTSKQVGAKTVA 42
            YTVAVGAGSAEVCGAITVRGHYFENGNIQLQTSKQVGAKTVA
Sbjct:  190 YTVAVGAGSAEVCGAITVRGHYFENGNIQLQTSKQVGAKTVA 231          
BLAST of mRNA_Ecto-sp13_S_contig76181.18828.1 vs. uniprot
Match: A0A6H5KUK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK7_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 4.100e-17
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 0
Query:    1 YTVAVGAGSAEVCGAITVRGHYFENGNIQLQTSKQVGAKTVA 42
            Y+VAVGAGSAEVCGAI VRGHYFENGNIQLQTSKQVGAKTVA
Sbjct:  283 YSVAVGAGSAEVCGAIAVRGHYFENGNIQLQTSKQVGAKTVA 324          
BLAST of mRNA_Ecto-sp13_S_contig76181.18828.1 vs. uniprot
Match: F0YJQ7_AURAN (F-actin-capping protein subunit alpha (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJQ7_AURAN)

HSP 1 Score: 53.9 bits (128), Expect = 2.700e-7
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    1 YTVAVGAGSAEVCGAITVRGHYFENGNIQLQTSKQVGAKTVA 42
            +TV +G G A V GA+ VR HYFE+GN+QLQTSK  G  TVA
Sbjct:  176 WTVVLGDGEALVSGAVKVRAHYFEDGNVQLQTSKTCGEATVA 217          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig76181.18828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYI5_ECTSI1.020e-18100.00F-actin-capping protein subunit alpha n=1 Tax=Ecto... [more]
A0A6H5KUK7_9PHAE4.100e-1795.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0YJQ7_AURAN2.700e-761.90F-actin-capping protein subunit alpha (Fragment) n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002189F-actin-capping protein subunit alphaPFAMPF01267F-actin_cap_Acoord: 1..39
e-value: 8.6E-9
score: 35.2
IPR042276F-actin-capping protein subunit alpha/beta, domain 2GENE3D2.40.160.80coord: 1..42
e-value: 2.6E-9
score: 39.0
IPR037282F-actin-capping protein subunit alpha/betaSUPERFAMILY90096Subunits of heterodimeric actin filament capping protein Capzcoord: 1..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig76181contigEcto-sp13_S_contig76181:366..491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig76181.18828.1mRNA_Ecto-sp13_S_contig76181.18828.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig76181 366..491 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig76181.18828.1 ID=prot_Ecto-sp13_S_contig76181.18828.1|Name=mRNA_Ecto-sp13_S_contig76181.18828.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=42bp
YTVAVGAGSAEVCGAITVRGHYFENGNIQLQTSKQVGAKTVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002189CapZ_alpha
IPR042276CapZ_alpha/beta_2
IPR037282CapZ_alpha/beta