prot_Ecto-sp13_S_contig7618.18826.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7618.18826.1
Unique Nameprot_Ecto-sp13_S_contig7618.18826.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length386
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7618.18826.1 vs. uniprot
Match: A0A6H5KZ44_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ44_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 2.130e-116
Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 0 
Query:  196 HVAAWEDRESVGEDGTSSWNSGNSIDDPPEVDNKVLTPEERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGICAEDLLGVQLIHLVHPDDAGRVTEALRRALLCDQVTQVVVYRLRHQQQEFTVESSFRVVPTKLVAITRVGGPGVA 382
            HVAAWEDRES GEDGTSSWNSGNSIDDPPEVDNK+LTPEERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQR LGI  EDLLGVQLIHLVHPDDAGRVTEALRRALLC+QVTQVVVYRLRHQQQEFTVESSFRVVPTKLVAITRVGGPGVA
Sbjct:  140 HVAAWEDRESAGEDGTSSWNSGNSIDDPPEVDNKLLTPEERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRALGIRTEDLLGVQLIHLVHPDDAGRVTEALRRALLCNQVTQVVVYRLRHQQQEFTVESSFRVVPTKLVAITRVGGPGVA 326
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BLAST of mRNA_Ecto-sp13_S_contig7618.18826.1 vs. uniprot
Match: D7G032_ECTSI (Multi-sensor hybrid histidine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G032_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 1.440e-72
Identity = 119/124 (95.97%), Postives = 120/124 (96.77%), Query Frame = 0 
Query:  262 MKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGICAEDLLGVQLIHLVHPDDAGRVTEALRRALLCDQVTQVVVYRLRHQQQEFTVESSFRVVPTKLVAITRVGGPGVAILP 385
            MKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGI  EDLLGVQLIHLVHPDDAGRVTEAL  ALLC+QVTQVVVYRLRHQQQEFTVESSFRVVPTKLVAITRVGGPGVAILP
Sbjct:    1 MKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGISTEDLLGVQLIHLVHPDDAGRVTEALPPALLCNQVTQVVVYRLRHQQQEFTVESSFRVVPTKLVAITRVGGPGVAILP 124
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BLAST of mRNA_Ecto-sp13_S_contig7618.18826.1 vs. uniprot
Match: A0A6H5KYK0_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYK0_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 4.060e-25
Identity = 71/160 (44.38%), Postives = 96/160 (60.00%), Query Frame = 0 
Query:  234 EERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGICAEDLLGVQLIHLVHPDDAGRVTEAL---------RRALLCDQVTQVVVYRLRHQQQ--EFTVESSFRVVPTKLVAITRVGGPGVA 382
            +++  RNR +NRDHSRRSR+RKKA +EG+K    +LG YRMLVEQAHD+IS H+ D    F  AS AF R LG     +LG  L+ LV P D   V +A+         ++A     V ++V YR+R         VE+SFR+   +L+AITR+ G GV+
Sbjct:  393 DDKARRNREKNRDHSRRSRERKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSADADAFFALASGAFYRQLGFEPTKMLGTSLLDLVEPKDVQAVVQAIMDTLSRGGIKQASFMHSVPKLVQYRMRPPSDGDAVEVETSFRMASRRLLAITRIVGAGVS 552
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BLAST of mRNA_Ecto-sp13_S_contig7618.18826.1 vs. uniprot
Match: D8LJL9_ECTSI (PAS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL9_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 9.960e-24
Identity = 70/150 (46.67%), Postives = 91/150 (60.67%), Query Frame = 0 
Query:  234 EERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGICAEDLLGVQLIHLVHPDDAGRVTEALRRALLCDQVTQVVVYRLRHQQQ--EFTVESSFRVVPTKLVAITRVGGPGV 381
            +++  R+R +NRDHSRRSRQRKKA +EG+K    +LG YRMLVEQAHD+IS H+ D    F  AS AF R LG     +LG  L+ LV   D   V +A+   L    + QV  YR+R         VE+SFR+   +L+AITR+ G GV
Sbjct:  355 DDKTRRSREKNRDHSRRSRQRKKAQLEGLKQASIDLGPYRMLVEQAHDMISVHSADADAFFALASGAFYRQLGFEPTKMLGASLLDLVETKDVQAVVQAIMDTLSRGGIKQVQ-YRMRPPSDGDAVEVETSFRMASRRLLAITRIVGAGV 503
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BLAST of mRNA_Ecto-sp13_S_contig7618.18826.1 vs. uniprot
Match: A0A662WZ67_9STRA (PAS domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WZ67_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 5.540e-12
Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = 0 
Query:  238 ERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGICAEDLLGVQ--LIHLVHPDDAGRVTEALRRALLCDQVTQVVVYRLRHQQQE-FTVESSFRVVPTKLVAITRV 376
            E++R RNRDHSR+SR RKK  VE +K++V +L  Y+ + EQ  D I+    +   +FLY+S A+ RVLG     ++  Q   + LVHPD+A  V     +     + T+   +R++  + E F  E+S R+    +V  TRV
Sbjct:  240 EKSRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCLDCIALVAAESSAIFLYSSAAYTRVLGYQPHQIVPGQTSFLDLVHPDNAQEVRAVFTKFSTLGE-TRRFQFRIKSMEGEYFRAETSARLAEKGVVCSTRV 380
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BLAST of mRNA_Ecto-sp13_S_contig7618.18826.1 vs. uniprot
Match: A0A485LAM1_9STRA (Aste57867_18121 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAM1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.020e-11
Identity = 53/144 (36.81%), Postives = 78/144 (54.17%), Query Frame = 0 
Query:  236 RLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGICAEDLLG--VQLIHLVHPDDAGRVTEALRRALLCDQVTQVVVYRLRHQQQEFTV-ESSFRVVPTKLVAITRV 376
            + +++R RNRDHSR+SR RKKA VE +K +V +L  Y+ L EQ  DLI+  + D     ++ + ++ RVLG   + L+   +    LVHPDD  +V   L R      V  VV Y  +H +  +   E S R+    +V  TRV
Sbjct:  308 KADKSRERNRDHSRKSRLRKKAFVECLKTEVKQLQMYKDLCEQNADLIAMVSLDQERKIMWLTGSYNRVLGFHEKKLMNEEISFFDLVHPDDVAKVRSELNRIAKYQDVYGVV-YNTKHSKGTYWKGEMSARMCDQGIVITTRV 450
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BLAST of mRNA_Ecto-sp13_S_contig7618.18826.1 vs. uniprot
Match: A0A5D6Y8K6_9STRA (PAS domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8K6_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.590e-11
Identity = 56/168 (33.33%), Postives = 94/168 (55.95%), Query Frame = 0 
Query:  215 NSGNSIDDPPEVDNKVLTPEERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGICAEDLLGVQ--LIHLVHPDDAGRVTEALRRALLCDQVTQVVVYRLRHQQQE-FTVESSFRVVPTKLVAITRVGGP 379
            N+G+S ++  E + + +  EE+   +R RNRDHSR+SR RKK  VE +K+ VT+L  Y+ + EQ  DLI+  + D   +F+Y+S A+ R+LG   + ++  Q   + LVHPD+   V    ++    ++ T+   +R++    E F  E+   +    +V  TRV  P
Sbjct:  258 NNGHSFNELNEDEQQAILKEEK---SRERNRDHSRKSRLRKKEYVESLKHDVTQLQIYQQICEQCVDLIALVSQD--AIFMYSSAAYARMLGYQNDQIIAGQTSFLDLVHPDNVHEVRSVFQKFSALNE-TRKFQFRIKSVDNEYFRAETVACMTDKGVVCSTRVDRP 419
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BLAST of mRNA_Ecto-sp13_S_contig7618.18826.1 vs. uniprot
Match: K3WD31_GLOUD (PAS domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WD31_GLOUD)

HSP 1 Score: 75.9 bits (185), Expect = 1.960e-11
Identity = 55/168 (32.74%), Postives = 95/168 (56.55%), Query Frame = 0 
Query:  212 SSWNSGNSIDDPPEVDNKVLTPEERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGICAEDLLGVQ--LIHLVHPDDAGRVTEALRRALLCDQVTQVVVYRLRHQQQE-FTVESSFRVVPTKLVAITRV 376
            ++ N+G++ D+  E + + +  EE+   +R RNRDHSR+SR RKK  VE +K++V++L  Y+ + EQ  DLI+    D   +F+Y+S A+ RVLG     L+  Q   + LVHP++   V    ++     + ++   +R++  + E F  E+S  +    +V  TRV
Sbjct:  236 ATMNNGHNFDNLNEEEKQAMMKEEK---SRERNRDHSRKSRLRKKEFVESLKHEVSQLQIYQQICEQCLDLIALVNQD--AIFMYSSAAYSRVLGYQGHQLIAGQTSFLDLVHPENVQEVRSVFQKFSALGE-SKKFQFRIKSVEGEYFRAETSACMTDKGVVCSTRV 397
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BLAST of mRNA_Ecto-sp13_S_contig7618.18826.1 vs. uniprot
Match: A0A3M6VUN5_9STRA (PAS domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUN5_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 6.130e-11
Identity = 54/165 (32.73%), Postives = 88/165 (53.33%), Query Frame = 0 
Query:  215 NSGNSIDDPPEVDNKVLTPEERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGICAEDLLGVQ--LIHLVHPDDAGRVTEALRRALLCDQVTQVVVYRLRHQQQE-FTVESSFRVVPTKLVAITRV 376
            NS ++ D+  E + + L  EE+   +R RNRDHSR+SR RKK  VE +K++V +L  Y+ + EQ  D I+    +   +FL++S A+ RVLG     ++  Q   + +VHPD+   V     +     + T    +R++    E F  E++ R+    +V  TRV
Sbjct:  230 NSSHNFDNLSEDEKQALIKEEK---SRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAIFLFSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQEVRAVFTKLNTLGE-THRFKFRIKSMDGEYFNAETTARMAEKGVVCSTRV 390
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BLAST of mRNA_Ecto-sp13_S_contig7618.18826.1 vs. uniprot
Match: A0A3F2RI15_9STRA (PAS domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RI15_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.970e-10
Identity = 54/165 (32.73%), Postives = 87/165 (52.73%), Query Frame = 0 
Query:  215 NSGNSIDDPPEVDNKVLTPEERLERNRIRNRDHSRRSRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNAFQRVLGICAEDLLGVQ--LIHLVHPDDAGRVTEALRRALLCDQVTQVVVYRLRHQQQEF-TVESSFRVVPTKLVAITRV 376
            N  ++ ++  E + + L  EE+   +R RNRDHSR+SR RKK  VE +K++V +L  Y+ + EQ  D I+    +   VFLY+S A+ RVLG     ++  Q   + +VHPD+   V     +     + T    +R++    EF   E++ R+    +V  TRV
Sbjct:  229 NPAHNFENLSEDEKQALIKEEK---SRERNRDHSRKSRLRKKEFVESLKHEVGQLQVYQQICEQCMDCIALVAAEASAVFLYSSAAYTRVLGYQNHQIVPGQTSFLDMVHPDNVQDVRSVFTKLTTLGE-TYRFKFRIKSMDGEFFNAETTARLAEKGVVCSTRV 389
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7618.18826.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ44_9PHAE2.130e-11696.79PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G032_ECTSI1.440e-7295.97Multi-sensor hybrid histidine kinase n=1 Tax=Ectoc... [more]
A0A6H5KYK0_9PHAE4.060e-2544.38PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJL9_ECTSI9.960e-2446.67PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A662WZ67_9STRA5.540e-1236.62PAS domain-containing protein n=2 Tax=Nothophytoph... [more]
A0A485LAM1_9STRA1.020e-1136.81Aste57867_18121 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6Y8K6_9STRA1.590e-1133.33PAS domain-containing protein n=1 Tax=Pythium bras... [more]
K3WD31_GLOUD1.960e-1132.74PAS domain-containing protein n=1 Tax=Globisporang... [more]
A0A3M6VUN5_9STRA6.130e-1132.73PAS domain-containing protein n=1 Tax=Peronospora ... [more]
A0A3F2RI15_9STRA1.970e-1032.73PAS domain-containing protein n=3 Tax=Phytophthora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..153
NoneNo IPR availableGENE3D3.30.450.20coord: 270..376
e-value: 8.4E-16
score: 59.6
IPR000014PAS domainSMARTSM00091pas_2coord: 270..338
e-value: 7.4E-7
score: 38.8
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 271..364
e-value: 1.6E-7
score: 29.5
IPR000014PAS domainPROSITEPS50112PAScoord: 268..340
score: 13.322
IPR013655PAS fold-3PFAMPF08447PAS_3coord: 295..366
e-value: 6.2E-9
score: 36.0
IPR004827Basic-leucine zipper domainPFAMPF07716bZIP_2coord: 233..273
e-value: 7.3E-5
score: 22.8
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 272..366

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7618contigEcto-sp13_S_contig7618:4542..7280 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7618.18826.1mRNA_Ecto-sp13_S_contig7618.18826.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7618 4542..7280 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7618.18826.1 ID=prot_Ecto-sp13_S_contig7618.18826.1|Name=mRNA_Ecto-sp13_S_contig7618.18826.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=386bp
ILRGRPIAPNQQDLPSLLGIDGVGNSGGGGGGPHGTAAMTSGPSSSSLAS
YASSSYPGMELGWAQQQQQQQQGFYEALAVAGGTGAPLFALPPAATASHD
ASLAAAAAAQGNVLQQGGVAADGGVSAARNFLLQQQQQQQQQLLQKQQLM
QTQMLQKQLLQKQQEQQFLQLRSQQQHQGQQQGQLQQQLQHPQQQHVAAW
EDRESVGEDGTSSWNSGNSIDDPPEVDNKVLTPEERLERNRIRNRDHSRR
SRQRKKALVEGMKNQVTELGAYRMLVEQAHDLISAHTTDDRTVFLYASNA
FQRVLGICAEDLLGVQLIHLVHPDDAGRVTEALRRALLCDQVTQVVVYRL
RHQQQEFTVESSFRVVPTKLVAITRVGGPGVAILP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000014PAS
IPR013655PAS_fold_3
IPR004827bZIP
IPR035965PAS-like_dom_sf