mRNA_Ecto-sp13_S_contig76106.18817.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig76106.18817.1 vs. uniprot
Match: D8LRN9_ECTSI (Rubredoxin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN9_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 1.350e-18 Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 1
Query: 1 YKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMDED 114
YKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMD+D
Sbjct: 428 YKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMDDD 465
BLAST of mRNA_Ecto-sp13_S_contig76106.18817.1 vs. uniprot
Match: A0A7S2XMQ9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMQ9_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 3.130e-11 Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = 1
Query: 1 YKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMD 108
+ +FVAKGREFKFFGD+FKCPECGAGK+KF+ S D
Sbjct: 456 FTIFVAKGREFKFFGDNFKCPECGAGKDKFVGRSDD 491
BLAST of mRNA_Ecto-sp13_S_contig76106.18817.1 vs. uniprot
Match: A0A835Z4L2_9STRA (Rubredoxin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4L2_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.830e-10 Identity = 25/35 (71.43%), Postives = 29/35 (82.86%), Query Frame = 1
Query: 1 YKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSM 105
Y ++VAKGRE+KFFGDDFKCPECGA K KF E +
Sbjct: 294 YTLYVAKGREWKFFGDDFKCPECGASKGKFQEKGV 328
BLAST of mRNA_Ecto-sp13_S_contig76106.18817.1 vs. uniprot
Match: L1IPJ7_GUITC (Rubredoxin-like domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IPJ7_GUITC) HSP 1 Score: 62.0 bits (149), Expect = 3.810e-10 Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 1
Query: 1 YKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMD 108
Y +FVAKGREFKFFGD+FKCP+CGAGK F +++ +
Sbjct: 399 YTLFVAKGREFKFFGDNFKCPQCGAGKQYFKDNAAE 434
BLAST of mRNA_Ecto-sp13_S_contig76106.18817.1 vs. uniprot
Match: A0A7S0YQJ8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YQJ8_9CRYP) HSP 1 Score: 60.8 bits (146), Expect = 9.740e-10 Identity = 24/36 (66.67%), Postives = 30/36 (83.33%), Query Frame = 1
Query: 1 YKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMD 108
Y +FVAKGREFKF+GDDFKC CGAGK F ++S++
Sbjct: 417 YTLFVAKGREFKFYGDDFKCAGCGAGKEAFKDNSLE 452
BLAST of mRNA_Ecto-sp13_S_contig76106.18817.1 vs. uniprot
Match: A0A8J6CDY1_DIALT (Rubredoxin-like domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDY1_DIALT) HSP 1 Score: 60.1 bits (144), Expect = 1.810e-9 Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 1
Query: 1 YKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMD 108
Y +F A GREFKFFGDDFKCP+CGAGK+ F ++ +
Sbjct: 373 YTLFPAAGREFKFFGDDFKCPQCGAGKDAFTDAKTE 408
BLAST of mRNA_Ecto-sp13_S_contig76106.18817.1 vs. uniprot
Match: A0A448YYL6_9STRA (Rubredoxin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYL6_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.820e-9 Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 1 YKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMDE 111
Y +F+AKGRE KFFGD+FKCPECGA K+KF M +
Sbjct: 415 YTLFIAKGREAKFFGDNFKCPECGADKDKFEPKDMSD 451
BLAST of mRNA_Ecto-sp13_S_contig76106.18817.1 vs. uniprot
Match: A0A7S0NDR1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NDR1_9CRYP) HSP 1 Score: 59.7 bits (143), Expect = 2.020e-9 Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 1
Query: 1 YKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMD 108
Y +FVAKGREFKFFGD+FKCP+CGA K F +++ +
Sbjct: 252 YTLFVAKGREFKFFGDNFKCPQCGASKQYFKDNAAE 287
BLAST of mRNA_Ecto-sp13_S_contig76106.18817.1 vs. uniprot
Match: A0A7S0THQ3_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0THQ3_HEMAN) HSP 1 Score: 58.5 bits (140), Expect = 6.360e-9 Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 1
Query: 1 YKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSM 105
+ +FVAKGREFKF+GDDFKC CGAGK F ++S+
Sbjct: 425 FTLFVAKGREFKFYGDDFKCQGCGAGKEDFKDNSL 459
BLAST of mRNA_Ecto-sp13_S_contig76106.18817.1 vs. uniprot
Match: A0A7S2Z9V0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z9V0_9RHOD) HSP 1 Score: 57.0 bits (136), Expect = 2.210e-8 Identity = 22/37 (59.46%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 1 YKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMDE 111
Y +F A GREFKFFG DF CP+CGA K+KF++ + +E
Sbjct: 352 YTLFPAAGREFKFFGSDFACPQCGASKDKFVDLNEEE 388 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig76106.18817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig76106.18817.1 >prot_Ecto-sp13_S_contig76106.18817.1 ID=prot_Ecto-sp13_S_contig76106.18817.1|Name=mRNA_Ecto-sp13_S_contig76106.18817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=37bp MFVAKGREFKFFGDDFKCPECGAGKNKFLESSMDED*back to top mRNA from alignment at Ecto-sp13_S_contig76106:293..409- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig76106.18817.1 ID=mRNA_Ecto-sp13_S_contig76106.18817.1|Name=mRNA_Ecto-sp13_S_contig76106.18817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=117bp|location=Sequence derived from alignment at Ecto-sp13_S_contig76106:293..409- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig76106:293..409- >mRNA_Ecto-sp13_S_contig76106.18817.1 ID=mRNA_Ecto-sp13_S_contig76106.18817.1|Name=mRNA_Ecto-sp13_S_contig76106.18817.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=111bp|location=Sequence derived from alignment at Ecto-sp13_S_contig76106:293..409- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |