prot_Ecto-sp13_S_contig761.18816.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig761.18816.1
Unique Nameprot_Ecto-sp13_S_contig761.18816.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length273
Homology
BLAST of mRNA_Ecto-sp13_S_contig761.18816.1 vs. uniprot
Match: A0A6H5KHA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA7_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 3.260e-40
Identity = 67/104 (64.42%), Postives = 86/104 (82.69%), Query Frame = 0
Query:    1 MACPEGESFAVDSNVTYENSRSFNGCYEAIAESWGDQTAYFLDGEEEAGTPGMYPSSNFDD---EHDVWVLAYFTTEGEFSRRCKDAEEEDSSTVHPADVLQWD 101
            MAC +G+SF +DS+VTYE+S SF+GCYEA A+++  +T YFLDG+E  G PG+Y S+NFDD   EH  WVL Y+TT+GEF RRCKDA+EEDSST+HPA+V+QWD
Sbjct:    1 MACSDGDSFTIDSDVTYEDSLSFDGCYEASADTFNSETMYFLDGDEFIGYPGIYSSNNFDDDGDEHGTWVLGYYTTDGEFFRRCKDADEEDSSTLHPAEVVQWD 104          
BLAST of mRNA_Ecto-sp13_S_contig761.18816.1 vs. uniprot
Match: D7G7I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7I5_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 5.850e-11
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 0
Query:   15 VTYENSRSFNGCYEAIAESWGDQTAYFLDGEEEAGTPGMYPSSNFDDEHDVWVLAYF----TTEGEF--SRRCKDAEEEDSSTVHPADVLQW 100
            V  + + + +GCYE    S  D   YFLDG E  G+  +Y SS+F D+H VWV+A        EG F  S  CKDA E+D++T+HP +V+QW
Sbjct:   10 VEVDYNSAVDGCYEDTTTSVNDLDGYFLDGVEAGGSSIVYASSSFRDDHFVWVVANVYDIDVEEGIFDVSITCKDAYEDDATTLHPVEVIQW 101          
BLAST of mRNA_Ecto-sp13_S_contig761.18816.1 vs. uniprot
Match: A0A6H5K4G7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4G7_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 8.170e-5
Identity = 38/93 (40.86%), Postives = 48/93 (51.61%), Query Frame = 0
Query:   14 NVTYENSRSFNGCYEAIAESWGDQTAYFLDGEEEAGTPGMYPSSNFDDEHDVWVLAYF----TTEGEF--SRRCKDAEEEDSSTVHPADVLQW 100
            N+ Y +    +GCYE    S  D   YFLDG E  G      SS F     VWV+A        EG F  +  CKDA EED++T+HP +V+QW
Sbjct:   11 NIDYTSE--VDGCYEDTTTSINDLDGYFLDGVEAGG------SSVF-----VWVVANVYDMDVEEGIFDAATTCKDAYEEDATTLHPVEVIQW 90          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig761.18816.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KHA7_9PHAE3.260e-4064.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7I5_ECTSI5.850e-1143.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4G7_9PHAE8.170e-540.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..214
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 215..272
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..190
NoneNo IPR availableTMHMMTMhelixcoord: 192..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig761contigEcto-sp13_S_contig761:5254..9793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig761.18816.1mRNA_Ecto-sp13_S_contig761.18816.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig761 5088..10493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig761.18816.1 ID=prot_Ecto-sp13_S_contig761.18816.1|Name=mRNA_Ecto-sp13_S_contig761.18816.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=273bp
MACPEGESFAVDSNVTYENSRSFNGCYEAIAESWGDQTAYFLDGEEEAGT
PGMYPSSNFDDEHDVWVLAYFTTEGEFSRRCKDAEEEDSSTVHPADVLQW
DCKDADDPSNSTLYPDEDAAVTITCGCDSPTPSPTPSPTPSDTLSPTTPT
SSSLTSSPTSSPTTPALDPASPSSPSSQLTTETSSGKGIPVGAIAGVAVA
GVLVVCFAILAVLFRTGRLKNCCGGSRNTAANDGVSPGYASDSVPNGGTS
VEATTGPTRGHYPVAHQYPAAV*
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