prot_Ecto-sp13_S_contig7606.18811.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7606.18811.1
Unique Nameprot_Ecto-sp13_S_contig7606.18811.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length101
Homology
BLAST of mRNA_Ecto-sp13_S_contig7606.18811.1 vs. uniprot
Match: D7FT24_ECTSI (Similar to ataxia telangiectasia and Rad3 related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT24_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 3.730e-53
Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0
Query:    1 VHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDIDGEERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEK 101
            VHRALVILEPVETDVDSLKALLTVD GTISKSRGGTAIGGVGTSSSSLPRSGLDIDG+ERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEK
Sbjct: 1375 VHRALVILEPVETDVDSLKALLTVDTGTISKSRGGTAIGGVGTSSSSLPRSGLDIDGDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEK 1475          
BLAST of mRNA_Ecto-sp13_S_contig7606.18811.1 vs. uniprot
Match: A0A6H5KWD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD2_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 3.890e-51
Identity = 98/101 (97.03%), Postives = 99/101 (98.02%), Query Frame = 0
Query:    1 VHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDIDGEERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEK 101
            VHRALVILEPVETDVDSLKALLTV KGTISKSRGGT IGGVGTSSSSLPRSGLDIDG+ERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEK
Sbjct:  203 VHRALVILEPVETDVDSLKALLTV-KGTISKSRGGTTIGGVGTSSSSLPRSGLDIDGDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEK 302          
BLAST of mRNA_Ecto-sp13_S_contig7606.18811.1 vs. uniprot
Match: A0A4D9CU95_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU95_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 5.800e-10
Identity = 39/98 (39.80%), Postives = 55/98 (56.12%), Query Frame = 0
Query:    1 VHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDIDGEE-RLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRP 97
            VH AL++LEPV+ D+ +L+  +T                          R G  + GE+ + Q A +LLL T+W+V+AG KHGQ V+ RYKLAL+LRP
Sbjct: 2911 VHEALLLLEPVDVDLPTLRRRVT-----------------------DAVRHGTHLHGEDVKRQAATRLLLATDWMVQAGVKHGQQVLDRYKLALELRP 2985          
BLAST of mRNA_Ecto-sp13_S_contig7606.18811.1 vs. uniprot
Match: W7TMH7_9STRA (Serine threonine-protein kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMH7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.600e-9
Identity = 38/98 (38.78%), Postives = 54/98 (55.10%), Query Frame = 0
Query:    1 VHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDIDGEE-RLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRP 97
            VH AL++LEP + D+ +L+  +T                          R G  + GE+ + Q A +LLL T+W+V+AG KHGQ V+ RYKLAL+LRP
Sbjct:  146 VHEALLLLEPNDVDLPTLRRRVT-----------------------DAVRHGTHLQGEDVKRQAATRLLLATDWMVQAGVKHGQQVLDRYKLALELRP 220          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7606.18811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FT24_ECTSI3.730e-5398.02Similar to ataxia telangiectasia and Rad3 related ... [more]
A0A6H5KWD2_9PHAE3.890e-5197.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9CU95_9STRA5.800e-1039.80Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TMH7_9STRA3.600e-938.78Serine threonine-protein kinase n=1 Tax=Nannochlor... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7606contigEcto-sp13_S_contig7606:2262..3716 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7606.18811.1mRNA_Ecto-sp13_S_contig7606.18811.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7606 2260..3716 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7606.18811.1 ID=prot_Ecto-sp13_S_contig7606.18811.1|Name=mRNA_Ecto-sp13_S_contig7606.18811.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=101bp
VHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPR
SGLDIDGEERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWE
K
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