prot_Ecto-sp13_S_contig7604.18810.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig7604.18810.1
Unique Name	prot_Ecto-sp13_S_contig7604.18810.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	216

Homology

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BLAST of mRNA_Ecto-sp13_S_contig7604.18810.1 vs. uniprot
Match: D7FQF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF6_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 1.270e-121
Identity = 198/217 (91.24%), Postives = 202/217 (93.09%), Query Frame = 0

Query:    1 QNGAGGGGGGLRETALSFTGFVSIITFCCCSTMSCVALCIKLASWMFGHRGRRQRVPLLPHEQQNDGEAEEQLYSPHQQPVIILDTNPAEQRRGCTLHASEIELRQVPFGNLEAQRETKNSDDDDDDVAFRTGTQADPNKIRKQQHLKGSASRMERDTTTGTSIMTRAGTPSTNGEEEDSSDFCEEADQEVXXXXXXXXXXXXEE--DTERGGNTTR 215
            +NGAGGGGGGLRETALSFTG VSIITFCCCSTMSCVALCIKLASWMFGHRGRRQRVPLLPHEQQNDGEAEEQLY PHQQPVIILDTNPAEQR GCTL ASEIELRQVPFGNLEAQRETKNSD +DDDV FRTG QADPNKI+KQQHLKGSASRMERDTTTGTSIMTRAGTPSTNGE+EDS DF EEADQE XXXXXXXXXXXX    D ERGGNTTR
Sbjct:    3 ENGAGGGGGGLRETALSFTGIVSIITFCCCSTMSCVALCIKLASWMFGHRGRRQRVPLLPHEQQNDGEAEEQLYYPHQQPVIILDTNPAEQRSGCTLRASEIELRQVPFGNLEAQRETKNSDVNDDDVGFRTGAQADPNKIQKQQHLKGSASRMERDTTTGTSIMTRAGTPSTNGEQEDSCDFGEEADQEXXXXXXXXXXXXXXXXXDNERGGNTTR 219

[Close]

BLAST of mRNA_Ecto-sp13_S_contig7604.18810.1 vs. uniprot
Match: A0A6H5JCN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCN9_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 3.610e-119
Identity = 195/218 (89.45%), Postives = 201/218 (92.20%), Query Frame = 0

Query:    1 QNGAGGGGGGLRETALSFTGFVSIITFCCCSTMSCVALCIKLASWMFGHRGRRQRVPLLPHEQQNDGEAEEQLYSPHQQPVIILDTNPAEQRRGCTLHASEIELRQVPFGNLEAQRETKNSDDDDDDVAFRTGTQADPNKIRKQQHLKGSASRMERDTTTGTSIMTRAGTPSTNGEEEDSSDFCEEADQ---EVXXXXXXXXXXXXEEDTERGGNTTR 215
            +NGAGGGGGGLRETALSFTG +SIITFCCCSTMSCVALCIKLASWMFGHRGRRQRVPLLPHEQQNDGEAEEQLYSPH QPVIILDTN AE+R G TLHASEIELRQVPFGNLEAQRETKNSDD DDDV F TG QADPNKIRKQQHLKGSAS+MERDTTTGTSIMTRAGTPSTNGE+EDSSDF EEADQ   E XXXXXXXXXXXX  DTERGG TT+
Sbjct:    3 ENGAGGGGGGLRETALSFTGIISIITFCCCSTMSCVALCIKLASWMFGHRGRRQRVPLLPHEQQNDGEAEEQLYSPHHQPVIILDTNSAEKRSGYTLHASEIELRQVPFGNLEAQRETKNSDDGDDDVVFLTGAQADPNKIRKQQHLKGSASQMERDTTTGTSIMTRAGTPSTNGEQEDSSDFGEEADQVVDEEXXXXXXXXXXXXXXDTERGGKTTK 220

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig7604.18810.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig7604.18810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FQF6_ECTSI	1.270e-121	91.24	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JCN9_9PHAE	3.610e-119	89.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 177..204
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..43
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 44..215
None	No IPR available	TMHMM	TMhelix		coord: 20..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig7604	contig	Ecto-sp13_S_contig7604:2205..2852 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig7604.18810.1	mRNA_Ecto-sp13_S_contig7604.18810.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig7604 2205..2852 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig7604.18810.1 ID=prot_Ecto-sp13_S_contig7604.18810.1|Name=mRNA_Ecto-sp13_S_contig7604.18810.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=216bp
QNGAGGGGGGLRETALSFTGFVSIITFCCCSTMSCVALCIKLASWMFGHR
GRRQRVPLLPHEQQNDGEAEEQLYSPHQQPVIILDTNPAEQRRGCTLHAS
EIELRQVPFGNLEAQRETKNSDDDDDDVAFRTGTQADPNKIRKQQHLKGS
ASRMERDTTTGTSIMTRAGTPSTNGEEEDSSDFCEEADQEVDEAEEEYKE
RQKEEDTERGGNTTR*