mRNA_Ecto-sp13_S_contig760.18807.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig760.18807.1
Unique NamemRNA_Ecto-sp13_S_contig760.18807.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig760.18807.1 vs. uniprot
Match: A0A6H5KLI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI8_9PHAE)

HSP 1 Score: 619 bits (1596), Expect = 2.290e-214
Identity = 444/604 (73.51%), Postives = 452/604 (74.83%), Query Frame = 1
Query:    1 MAEGRVHTATNLCCTLVLLAVLVATASSSVGDAHRQPACFLTPTSTSTPLCRSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSGAIRRRESLPLAARSRPAVRRGTTTSGGATITSKHDAGGGVGSAIRKSWKRSCGEGSMAATVSAVSEGTETREGEGAAAVAGEXXXXXXXXXXXXXXXXXVHGG----RGSRRNNGVGPGGARGKGKRAEKRDRGVLSRGMAATEHFFANGRRRKNGRQAKGDECDVRGSKGGGEGPXXXXXXXXXXXXLEGEEEAR-----EAEGLRVVPRHVAFVMDGNGRWAADRNLPRRTGHAEGARRAGEAVEECRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSNSXXXXXAVDGRAAASSAP--GVPPSVGIPVAAEAVGGDAGASSRSSRNSGRGDIAPPLPEQPIAAALPTATMTLCLAISYGGRSELAAAARELAAEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFR 1779
            MAEGR HTAT++C TLVLLAVLVA ASSSV DAHRQPACFLTPTSTSTPLC    XXXXXXXXXXXXXXXXXXXXXXXXXXXX                      TPS                                   D GGGVG A R+SW+RSCGEGSMAA VSAVSEG               XXXXXXXXXXXXXXXXX        RGSRRN+GVGPGGA G+GKRAEKRDRGVLSRGMAATEHFFANGRRRKNGRQAKGDE D RGSKGGGEGPXXXXXXXXXXXX             EAEGLRVVPRHVAFVMDGNGRWA  RNLPRRTGHAEGARRAGEAVE CRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLT IGELDRLPARLRSLLLEIQEDSN XXXXX              GVPPSV IPVA                      IAPPLP+QP+AAA PTATMTLCLAISYGGRSELAAAARELA EAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFR
Sbjct:    1 MAEGRGHTATSICYTLVLLAVLVAMASSSVSDAHRQPACFLTPTSTSTPLCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYHRCHLSLSSSPFAEGGPWWSTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNQDIGGGVGGAFRRSWRRSCGEGSMAAMVSAVSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSRRNSGVGPGGAHGEGKRAEKRDRGVLSRGMAATEHFFANGRRRKNGRQAKGDESDARGSKGGGEGPXXXXXXXXXXXXXXXXXXXXXXXXXEAEGLRVVPRHVAFVMDGNGRWAVSRNLPRRTGHAEGARRAGEAVEACRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTVIGELDRLPARLRSLLLEIQEDSNXXXXXXXXXXXXXXXXXXXXGVPPSVAIPVAXXXXXXXXXXXXXXXXXXXXXXIAPPLPKQPVAAAPPTATMTLCLAISYGGRSELAAAARELAVEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFR 604          
BLAST of mRNA_Ecto-sp13_S_contig760.18807.1 vs. uniprot
Match: D8LSM4_ECTSI (Alkyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM4_ECTSI)

HSP 1 Score: 448 bits (1152), Expect = 5.990e-151
Identity = 274/356 (76.97%), Postives = 278/356 (78.09%), Query Frame = 1
Query:  733 MAATEHFFANGRRRKNGRQAKGDECDVRGSKGGGEGPXXXXXXXXXXXXLEGEEEARE------AEGLRVVPRHVAFVMDGNGRWAADRNLPRRTGHAEGARRAGEAVEECRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSNSXXXXXAVDGRAAASSAPGVPPSVGIPVAAEAVGGDAGASSRSSRNSGRGD-IAPPLPEQPIAAALPTATMTLCLAISYGGRSELAAAARELAAEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFR 1779
            MAATEHFFANGRRRKNGRQAKGDE D RGSKGGGE P    XXXXXXXX               AEGLRVVPRHVAFVMDGNGRWAA+RNLPRR GHAEGARRAGEAVE CRRLGVEFVTLYAFSTENWRRP GEVSF+MDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDS  XXXXX                                              IAPPLP QP+AA  PT TMTLCLAISYGGRSEL AAARELAAEAAAGRLDPADIDEPALARRLST+RLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFR
Sbjct:    1 MAATEHFFANGRRRKNGRQAKGDESDARGSKGGGERPRPVAXXXXXXXXXXXXXXXXXXXXXXXAEGLRVVPRHVAFVMDGNGRWAANRNLPRRIGHAEGARRAGEAVEACRRLGVEFVTLYAFSTENWRRPTGEVSFIMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAPPLP-QPVAAP-PTPTMTLCLAISYGGRSELVAAARELAAEAAAGRLDPADIDEPALARRLSTARLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFR 354          
BLAST of mRNA_Ecto-sp13_S_contig760.18807.1 vs. uniprot
Match: A0A835ZI19_9STRA (Alkyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI19_9STRA)

HSP 1 Score: 234 bits (597), Expect = 3.960e-69
Identity = 132/289 (45.67%), Postives = 170/289 (58.82%), Query Frame = 1
Query:  913 GLRVVPRHVAFVMDGNGRWAADRNLPRRTGHAEGARRAGEAVEECRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSNSXXXXXAVDGRAAASSAPGVPPSVGIPVAAEAVGGDAGASSRSSRNSGRGDIAPPLPEQPIAAALPTATMTLCLAISYGGRSELAAAARELAAEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFR 1779
            GLR VP+HVAFV+DGNGRWA  R LPR  GH EGA+RA E +E CR LGV++VTL+ FSTENW+RPA EV+ LM L+E  +   R ++R+NGIRL  IG+ +RL   L+ L+ E+Q +++                           VA     GD                                 MT+CLA+SYGGR E+A AA+ +A   A GRL   D+ E  L   LST++ G+PDPDL++RTSGE R+SN L+WQ+AYSEL V  KAWPDF+  DLVEAF+
Sbjct:   30 GLRRVPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRETS---------------------------VADAQQSGD--------------------------------QMTVCLAVSYGGRDEIARAAKAVALAVAEGRLSADDVTEEVLQGYLSTTQAGVPDPDLIIRTSGEHRISNFLLWQAAYSELYVSAKAWPDFKAADLVEAFQ 259          
BLAST of mRNA_Ecto-sp13_S_contig760.18807.1 vs. uniprot
Match: A0A4V1S5M1_9BACT (Isoprenyl transferase n=3 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4V1S5M1_9BACT)

HSP 1 Score: 217 bits (553), Expect = 2.870e-63
Identity = 123/283 (43.46%), Postives = 162/283 (57.24%), Query Frame = 1
Query:  925 VPRHVAFVMDGNGRWAADRNLPRRTGHAEGARRAGEAVEECRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSNSXXXXXAVDGRAAASSAPGVPPSVGIPVAAEAVGGDAGASSRSSRNSGRGDIAPPLPEQPIAAALPTATMTLCLAISYGGRSELAAAARELAAEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEA 1773
            +PRH+A +MDGNGRWA +R LPR  GH  GA    E +E C  LGVE++TLYAFS+ENWRRP  EVS LM L++  L E+   L+R  +RL AIG++DRLP + R L+ +IQ+++                                                  G+ A                +TL LA+SYGGR E+  AA+ LAA+AAAG++ PA+ID    A RL T+  GIPDPDL+VRTSGE R+SN L+WQ +YSE+ +V K WPDFR+ DL +A
Sbjct:    7 IPRHIAIIMDGNGRWAKERGLPRLEGHRAGAESVREVMEACIELGVEYLTLYAFSSENWRRPESEVSALMGLLDRFLKEKAKDLQRQNVRLQAIGQIDRLPEKTRKLITKIQDET-------------------------------------------------AGNTA----------------LTLVLALSYGGREEIVEAAKSLAADAAAGKISPAEIDSELFASRLQTA--GIPDPDLLVRTSGEMRVSNFLLWQISYSEMVIVRKFWPDFRQKDLFDA 222          
BLAST of mRNA_Ecto-sp13_S_contig760.18807.1 vs. uniprot
Match: UPI0018690B5E (isoprenyl transferase n=1 Tax=Luteolibacter sp. NBU1238 TaxID=2776705 RepID=UPI0018690B5E)

HSP 1 Score: 213 bits (543), Expect = 8.420e-62
Identity = 124/283 (43.82%), Postives = 157/283 (55.48%), Query Frame = 1
Query:  925 VPRHVAFVMDGNGRWAADRNLPRRTGHAEGARRAGEAVEECRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSNSXXXXXAVDGRAAASSAPGVPPSVGIPVAAEAVGGDAGASSRSSRNSGRGDIAPPLPEQPIAAALPTATMTLCLAISYGGRSELAAAARELAAEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEA 1773
            +PRH+A +MDGNGRWA +R LPRR GH  GA    E VE C+ LGVE++TLYAFS+ENW RPA EV+ LM L+E  L E+ D L +  ++L AIG LDRLP R R+ L       N+     A +G                                                          ++TL LA+SYG R EL  AAR LA +AAAG++DPADID    A RL T+  GIPDPDL++RTSGE R+SN L+WQ +Y+E+ +  K WPDF + DL EA
Sbjct:    7 IPRHIAIIMDGNGRWAKERGLPRRAGHRAGAESVRECVEACKELGVEYLTLYAFSSENWNRPAAEVTALMALLERFLEEKADELMKQDVKLQAIGHLDRLPDRTRAKL-------NAAIERTAQNG----------------------------------------------------------SLTLVLALSYGSREELVEAARSLATDAAAGKIDPADIDGDLFASRLYTA--GIPDPDLLIRTSGELRVSNFLLWQISYAEIVIFKKFWPDFHQADLFEA 222          
BLAST of mRNA_Ecto-sp13_S_contig760.18807.1 vs. uniprot
Match: A0A6N6P144_9BACT (Isoprenyl transferase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A6N6P144_9BACT)

HSP 1 Score: 211 bits (536), Expect = 8.950e-61
Identity = 124/284 (43.66%), Postives = 154/284 (54.23%), Query Frame = 1
Query:  922 VVPRHVAFVMDGNGRWAADRNLPRRTGHAEGARRAGEAVEECRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSNSXXXXXAVDGRAAASSAPGVPPSVGIPVAAEAVGGDAGASSRSSRNSGRGDIAPPLPEQPIAAALPTATMTLCLAISYGGRSELAAAARELAAEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEA 1773
             +PRH+A +MDGNGRWA +R LPRR GH  GA    E +E C+ LGVE++TL+AFS+ENW RPA EV  LM L+E  L E+   L R  +RL AIG+LDRLPA+ R+LL  I                                                                 IA      +MT+ LA+SYG R E+ AAAR LA + AAGRL P  ID    A RL T+  GIPDPDL++RTSGE R+SN L+WQ +Y+E+ +V K WPDFR  DL EA
Sbjct:    6 TIPRHIAVIMDGNGRWAKERGLPRREGHRAGAESVREIMEACKELGVEYLTLFAFSSENWSRPAAEVHALMTLLERFLREKAKDLDRQNVRLQAIGQLDRLPAKTRALLDSI-----------------------------------------------------------------IARTASHTSMTMVLALSYGAREEIVAAARALATDTAAGRLLPEAIDAELFASRLQTT--GIPDPDLLIRTSGEMRISNFLLWQISYAEIIIVKKNWPDFREGDLFEA 222          
BLAST of mRNA_Ecto-sp13_S_contig760.18807.1 vs. uniprot
Match: UPI00198BEAB0 (Isoprenyl transferase n=1 Tax=Gloeobacteraceae cyanobacterium ES-bin-144 TaxID=2762589 RepID=UPI00198BEAB0)

HSP 1 Score: 211 bits (536), Expect = 8.950e-61
Identity = 123/283 (43.46%), Postives = 157/283 (55.48%), Query Frame = 1
Query:  925 VPRHVAFVMDGNGRWAADRNLPRRTGHAEGARRAGEAVEECRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSNSXXXXXAVDGRAAASSAPGVPPSVGIPVAAEAVGGDAGASSRSSRNSGRGDIAPPLPEQPIAAALPTATMTLCLAISYGGRSELAAAARELAAEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEA 1773
            +PRH+A +MDGNGRWA +R LPRR GH  GA    E  + C  LGVE++TLYAFS+ENW RPA EV  LM L++  L E+   L +  IRL AIG+L+RLP + R+LL +I   +         D +A                                                         +TL LA+SYGGR E+ +AAR LA +AAAG + P DID P  A RL T   GIPDPDL+VRTSGE R+SN L+WQ +Y+E+ +V K WPDFRR DL+E+
Sbjct:    7 IPRHIAVIMDGNGRWAKERGLPRREGHRAGAESVREITDACIELGVEYLTLYAFSSENWNRPAAEVKALMSLLDRFLAEKAKDLDKQKIRLLAIGQLERLPNKTRALLDKIMART--------ADHKA---------------------------------------------------------LTLVLALSYGGREEIVSAARSLATDAAAGAISPDDIDAPLFASRLQTH--GIPDPDLLVRTSGEMRVSNFLLWQISYAEIVIVKKFWPDFRRNDLIES 222          
BLAST of mRNA_Ecto-sp13_S_contig760.18807.1 vs. uniprot
Match: A0A3N5VFZ4_9BACT (Isoprenyl transferase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A3N5VFZ4_9BACT)

HSP 1 Score: 207 bits (528), Expect = 1.330e-59
Identity = 121/283 (42.76%), Postives = 154/283 (54.42%), Query Frame = 1
Query:  925 VPRHVAFVMDGNGRWAADRNLPRRTGHAEGARRAGEAVEECRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSNSXXXXXAVDGRAAASSAPGVPPSVGIPVAAEAVGGDAGASSRSSRNSGRGDIAPPLPEQPIAAALPTATMTLCLAISYGGRSELAAAARELAAEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEA 1773
            +PRH+A +MDGNGRWA +R LPRR GH  GA    E  + C  LGVE++TLYAFS+ENW RP  EV  LM L++  L E+   L++  IRL AIG+LDRLP + R LL +I  ++ S                                                                    +TL LA+SYG R E+ AA R LAA+A AGRL  A+ID    A RL T+  GIPDPDL++RTSGE R+SN L+WQ +Y+E+ +V K WPDFRR DL+EA
Sbjct:    7 IPRHIAVIMDGNGRWAKERGLPRREGHRAGAESVREVTDACIDLGVEYLTLYAFSSENWNRPESEVKALMQLLDRFLAEKSKDLKKQNIRLQAIGQLDRLPEKTRKLLDKIIAETASHT-----------------------------------------------------------------ALTLVLALSYGAREEIVAATRSLAADAEAGRLRSAEIDCTLFASRLQTA--GIPDPDLLIRTSGEMRVSNFLLWQISYAEIVIVKKFWPDFRRNDLIEA 222          
BLAST of mRNA_Ecto-sp13_S_contig760.18807.1 vs. uniprot
Match: A0A858RFV8_9BACT (Isoprenyl transferase n=1 Tax=Luteolibacter luteus TaxID=2728835 RepID=A0A858RFV8_9BACT)

HSP 1 Score: 206 bits (525), Expect = 3.650e-59
Identity = 123/285 (43.16%), Postives = 161/285 (56.49%), Query Frame = 1
Query:  919 RVVPRHVAFVMDGNGRWAADRNLPRRTGHAEGARRAGEAVEECRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSNSXXXXXAVDGRAAASSAPGVPPSVGIPVAAEAVGGDAGASSRSSRNSGRGDIAPPLPEQPIAAALPTATMTLCLAISYGGRSELAAAARELAAEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEA 1773
            R +PRH+A +MDGNGRWA +R LPRR GH  GA    E VE C++LGVE++TLYAFS+ENW RPA EV+ LM L+E  L E+ + L +  +RL AIG LDRLP R R  L +                                            A  R+S N+                     ++TL LA+SYG R E+A AAR LA +AAAG++DP+ ID   +A RL T+  GIPDPDL++RTSGE R+SN L+WQ +Y+E+ +  K WPDF + D+ EA
Sbjct:    5 RSIPRHIAIIMDGNGRWAKERGLPRRDGHRAGADSVRECVEACKQLGVEYLTLYAFSSENWNRPAAEVTALMALLERFLEEKAEELMKQNVRLQAIGHLDRLPDRTRRKLDK--------------------------------------------AIQRTSGNT---------------------SLTLVLALSYGAREEIAEAARSLAIDAAAGKIDPSKIDCSMVASRLYTA--GIPDPDLLIRTSGELRVSNFLLWQISYAEIVIFKKFWPDFGQADVFEA 222          
BLAST of mRNA_Ecto-sp13_S_contig760.18807.1 vs. uniprot
Match: A0A2A2QXE8_9BACT (Isoprenyl transferase n=1 Tax=Verrucomicrobiae bacterium Tous-C4TDCM TaxID=1982332 RepID=A0A2A2QXE8_9BACT)

HSP 1 Score: 204 bits (518), Expect = 3.860e-58
Identity = 124/283 (43.82%), Postives = 155/283 (54.77%), Query Frame = 1
Query:  925 VPRHVAFVMDGNGRWAADRNLPRRTGHAEGARRAGEAVEECRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQEDSNSXXXXXAVDGRAAASSAPGVPPSVGIPVAAEAVGGDAGASSRSSRNSGRGDIAPPLPEQPIAAALPTATMTLCLAISYGGRSELAAAARELAAEAAAGRLDPADIDEPALARRLSTSRLGIPDPDLVVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEA 1773
            +PRH+A +MDGNGRWA +R LPR  GH  GA    E VE C+ LGVE++TLYAFS+ENW RPA EV+ LM L+E  L E+ D L +  +RL AIG LDRLP + R  L                                      +A+   AG +S                            +TL LA+SYG R E+  AAR LAA+AAAG+LDPA ID    A RL T+   IPDPDL+VRTSGE R+SN L+WQ +Y+E+ +  K WPDF + DL EA
Sbjct:    7 IPRHIAIIMDGNGRWAKERGLPRLAGHRAGAESVRECVEACKELGVEYLTLYAFSSENWNRPAAEVTALMLLLERFLGEKADELMKQNVRLRAIGHLDRLPEKTRRKL-------------------------------------DKAINRTAGNTS----------------------------LTLVLALSYGSREEIVEAARSLAADAAAGKLDPATIDCATFASRLYTA--DIPDPDLLVRTSGELRVSNFLLWQISYAEIVIFKKFWPDFHQADLFEA 222          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig760.18807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLI8_9PHAE2.290e-21473.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSM4_ECTSI5.990e-15176.97Alkyl transferase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835ZI19_9STRA3.960e-6945.67Alkyl transferase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A4V1S5M1_9BACT2.870e-6343.46Isoprenyl transferase n=3 Tax=Verrucomicrobiaceae ... [more]
UPI0018690B5E8.420e-6243.82isoprenyl transferase n=1 Tax=Luteolibacter sp. NB... [more]
A0A6N6P144_9BACT8.950e-6143.66Isoprenyl transferase n=1 Tax=Verrucomicrobia bact... [more]
UPI00198BEAB08.950e-6143.46Isoprenyl transferase n=1 Tax=Gloeobacteraceae cya... [more]
A0A3N5VFZ4_9BACT1.330e-5942.76Isoprenyl transferase n=1 Tax=Verrucomicrobiaceae ... [more]
A0A858RFV8_9BACT3.650e-5943.16Isoprenyl transferase n=1 Tax=Luteolibacter luteus... [more]
A0A2A2QXE8_9BACT3.860e-5843.82Isoprenyl transferase n=1 Tax=Verrucomicrobiae bac... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig760contigEcto-sp13_S_contig760:17489..21841 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score455.7
Seed ortholog evalue3.4e-125
Seed eggNOG ortholog2880.D8LSM4
Model size1782
Hectar predicted targeting categorychloroplast
GOsGO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617
Exons5
EggNOG free text desc.polyprenol biosynthetic process
EggNOG OGsCOG0020@1,KOG1602@2759
Ec32 ortholog descriptionDecaprenyl diphosphate synthase-like
Ec32 orthologEc-09_002180.1
Cds size1782
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464029.671791-CDS-Ecto-sp13_S_contig760:17488..181951681464029.671791-CDS-Ecto-sp13_S_contig760:17488..18195Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig760 17489..18195 +
1681464029.6850533-CDS-Ecto-sp13_S_contig760:18715..189761681464029.6850533-CDS-Ecto-sp13_S_contig760:18715..18976Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig760 18716..18976 +
1681464029.6933215-CDS-Ecto-sp13_S_contig760:19998..200951681464029.6933215-CDS-Ecto-sp13_S_contig760:19998..20095Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig760 19999..20095 +
1681464029.7033339-CDS-Ecto-sp13_S_contig760:20661..207331681464029.7033339-CDS-Ecto-sp13_S_contig760:20661..20733Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig760 20662..20733 +
1681464029.7154043-CDS-Ecto-sp13_S_contig760:21196..218411681464029.7154043-CDS-Ecto-sp13_S_contig760:21196..21841Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig760 21197..21841 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig760.18807.1prot_Ecto-sp13_S_contig760.18807.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig760 17489..21841 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig760.18807.1

>prot_Ecto-sp13_S_contig760.18807.1 ID=prot_Ecto-sp13_S_contig760.18807.1|Name=mRNA_Ecto-sp13_S_contig760.18807.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=594bp
MAEGRVHTATNLCCTLVLLAVLVATASSSVGDAHRQPACFLTPTSTSTPL
CRSSSRSSSSSSRRPAARRPPSGSTDSATTAAGHHHRCHPSLSSSPFAAG
GQWWSTPSGAIRRRESLPLAARSRPAVRRGTTTSGGATITSKHDAGGGVG
SAIRKSWKRSCGEGSMAATVSAVSEGTETREGEGAAAVAGEARTSGTCGS
SSSSSSGSVHGGRGSRRNNGVGPGGARGKGKRAEKRDRGVLSRGMAATEH
FFANGRRRKNGRQAKGDECDVRGSKGGGEGPRPAAAAAAAAAKLEGEEEA
REAEGLRVVPRHVAFVMDGNGRWAADRNLPRRTGHAEGARRAGEAVEECR
RLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLT
AIGELDRLPARLRSLLLEIQEDSNSSSSSAAVDGRAAASSAPGVPPSVGI
PVAAEAVGGDAGASSRSSRNSGRGDIAPPLPEQPIAAALPTATMTLCLAI
SYGGRSELAAAARELAAEAAAGRLDPADIDEPALARRLSTSRLGIPDPDL
VVRTSGESRLSNLLVWQSAYSELCVVGKAWPDFRRPDLVEAFR*
back to top

mRNA from alignment at Ecto-sp13_S_contig760:17489..21841+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig760.18807.1 ID=mRNA_Ecto-sp13_S_contig760.18807.1|Name=mRNA_Ecto-sp13_S_contig760.18807.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4353bp|location=Sequence derived from alignment at Ecto-sp13_S_contig760:17489..21841+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGAAGGGAGGGTTCATACGGCGACGAATTTATGCTGCACCTTGGT TCTTCTTGCAGTGCTGGTGGCGACGGCGAGCAGCAGTGTGGGTGATGCAC ACCGGCAGCCTGCCTGCTTTTTGACCCCAACATCAACCTCGACTCCTCTC TGCAGGAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGGCGTCCGGCAGC CCGGCGTCCTCCATCCGGCTCCACCGACTCTGCAACCACCGCCGCCGGCC ACCACCACCGATGTCACCCCTCGCTGTCGTCGAGCCCTTTCGCCGCGGGC GGCCAATGGTGGTCTACGCCGAGCGGTGCTATTCGACGACGCGAGAGCTT GCCGTTAGCGGCGAGATCACGACCGGCCGTCCGTCGCGGCACCACAACCA GCGGCGGTGCCACCATCACCAGCAAACACGACGCCGGCGGCGGCGTTGGC AGTGCGATTCGGAAAAGCTGGAAACGTAGCTGCGGCGAGGGTTCGATGGC GGCGACGGTCTCCGCCGTCAGCGAGGGCACCGAAACGCGAGAGGGGGAGG GAGCGGCTGCGGTTGCTGGGGAAGCACGCACCAGTGGAACATGCGGCAGC AGCAGCAGCAGCAGCAGCGGTAGTGTTCACGGGGGAAGGGGAAGCAGGAG GAACAACGGCGTTGGTCCTGGAGGGGCGCGTGGAAAAGGAAAACGGGCAG AAAAAAGGTAAGATGTGTAGAACGCCAGACAGCACCGCTGCCTACTGTAA GAGGTCAAGGATAAGGATGCCTCCAAGTTGCAAACAATTTTTCAAGAGGG TTACACTTTTGTTTCCATCTGGTCACGTGTGTGTCAACATGTGAACACAT TTGCATGGTGCTTGCGTCCTACAGTAGACTATCTGTCGAGGGCGGGGGGG CGAATTTTTTCACGGGGCGCGACATGTATCGCATGCATGGGACGGGGGAG GGGGGGAGTGGCAAAGCCTTCTATCATGAAGAATGCGCTCCGTGCAGGTC CGAACAGCTGTACATGCCAGCCCAATGGTGAATGACATTTGCATACGCCT GGCAATCACCTCACGAAGGACTAGGATTCAAATGTTGATGTTTTACGTGT TATGCTGTTGATAGGCCGCAAAGAAACGTCCTCATCCCTGTTTTATTGTG TCTTGCTCTGCACCCTCCCCCCCCCCCCCCCCCTTCCCCGGTTAACAACA TACGCCTTCGATCCTCACCTACTCAAGAGATAGAGGGGTCCTCTCCCGAG GCATGGCGGCGACGGAACATTTCTTCGCGAACGGCAGGAGGCGAAAAAAC GGGCGTCAGGCCAAGGGTGACGAGTGTGACGTTCGAGGATCGAAGGGAGG GGGGGAGGGGCCAAGGCCGGCGGCGGCGGCGGCGGCAGCAGCAGCAAAGC TGGAAGGTGAAGAGGAGGCGAGGGAAGCGGAGGGGCTCCGTGTGGTGCCG CGGCACGTGGCATTCGTCATGGACGGTAATGGGCGATGGTGAGAGTACAA ACACAACAGGGGGGGGACAAGCGGGGGGAGGTGTTTTCATAGTCGTGCAT GTCCTTGTTGTTATACCATTGACCTCGCATACCTGCAAAACCGGGACGGA GCACGCCGGGTGCTCACCGAACCAGGCTCTCACGTCACCAACCGCGAAGC ACCGTGAGGTATTCCGCGAGTCGCATGAAGGGTGCACTGCATCCTGCTAA GGGTGTTCGGCATCCTGTGCTTCCTTCATTGCGTACGGATGACAGCTGCG TATGACTTATTTTATTTTCTGGTGCTTTCACTTCAAGGACAGTTATAAGC ACTGCTGTGTAACTGCCTCGAGGGTGCTTGACTAACAATACAACGTGGGG CGATCATCCCCTTCGCGCGGAGTGAGGGTTCTCGACCCCGCACAGCATGA TCTACTCGACCACCATTACAGGAGGGGCGGAGTATTGGCGAAGATGGGCA GATGAGTAGCACGTACAGATACAAAAGTTATTTCACAGCAAGTCTCGCCG TATTTAATGAACCCTTGCAATCCTCTCCATCTGTGCGTGGAGATCATGCC AATAGTGGTCGACAGCGGCGGTTGCCTGGCCATGCGAACCATATGATTAT TTGTCGGTCGATTGGCAGGCCGCCAACAGCCGAGCCATGATGAAGGTGCT ACAGCAGGCATAGCCACCCCGCTGCCACACGCCGGGCCCCTTCGTCGTTC CAACCCGAGAAGAATATTCGGGCCATGCATACAGTACCATGTAGCAGTGC AGTCGCTCTGTTTCACCCGCCTTGTCTTGCCTTGTTGGTCCTCGTGAAAA ACAAGCGATGTATGTCTGTCCTACGTGTGCAACCCCTGTGAGGTGTACCG AGGATGAAATCACGGACAAGCTCCCGTGGCGAGCGCAATATTCTTCAATG ACACTCTGCTGTCGTGTGTCAAGCGCATGGACGGCAGTCAAACATTTCAC AAGAACTGTAGGTCTGACCCTAGAAACCGCAACCCGCCCCCCCCCCTCAC AAACAAATAGGGCAGCTGACAGAAATTTGCCGCGGAGGACTGGGCATGCG GAGGGGGCCCGCCGAGCAGGGGAAGCGGTTGAGGAGTGCCGACGCCTCGG GGTTGAGGTGCGGCAGGAACGCCCGTGGTGCTCTGCTGATATTTCTTGTA TGTGTGGGGACCATGCTTGTTCCGCGTTTTTCGTGGGATGAGACAAGCCG GAATGCTGTCGACCCAGTTCTTCGTGCGATGTCGAGAGCCGTATCATCCC ACGGGGTGGACCCGAAACTCCAGCAATCACGTTGCGGTTGAGTGTCGGGT TTTGCCGCCCAAGTCGCGAGGCATCCTCTACTACTTTTTTTGTCGGATAT GGTTTCAGGCTCTGTTTGCCATTTTGCGTCAAAATTTCCCGACCTTTCTC GCCCAATTCTCATGCTTCCTCGTCGGTTTATGTCAAACGGGTTGTTGCCC AGGCCAACGCCTGGGGGGGGGGGGATGGCATGAAGAACTTGATGACCTCT CCTCTAATTCGCACGGCCCGACACGACACAATTACGCCCCAGTTTCTTCG TGCCTGTTTGTGTCGAGCTGCCTCTTTGCGCTCCTTACCTTCCCGACCCT CCTTCTCCTCCTTCCCCTCCCTGTCCGTTGTTCCATCGATGTTGTTGTTG TTCGTTGTTTCGTGGTTCGCCAGTTCGTGACCCTGTACGCGTTTTCGACG GAGAACTGGAGGCGGCCGGCGGGGGAAGTTTCATTCCTCATGGATGTGAG TGTGGATGCGTTCACTGGCTACGTATGTTATACGGCGCCGGTCTTGATAG TTACCGACACTTCACAGGAATTCGAGTACAAGTAAGCCTTTCTCGCCAGC CCTCCCCCCCCTCTCCCTCGGGAACGAGAGTTTCGAGGATAGGTGGGGTT GGCTAGGCCTCGTGAGCAACCGAGGTCGTGATGGGGGCGTGGATAACCCC CCTCCAGTCGCCGGCTCTCATAGGTTTGTGGGAAGCATTCCTGTGTGGGA CGTGACACAATGAATCCGTTCCTACCTTCTTTCTTCACCCAAAACATCGA GATCTTGGCTCACCCCCCATCATCATTCAAGTATGCCTGCGTGGCACTCC ACACAATCGACCTGTCTCCACTGATATCTTCACCCACAACGTCGCGATCT TGACCCCCACCTCCTCCATTGATGCCGTATCCATCATGACGCATTTCGAC GGCCGCAGCTGATGGAGGAGACTCTTCTGGAGCAGCGTGACAGTCTTCGC CGGAACGGAATCCGACTCACAGCCATCGGGGAGCTCGACCGCCTGCCGGC GCGGCTCCGCTCCCTCCTCCTAGAGATTCAGGAAGACAGCAACAGCAGCA GCAGTAGCGCAGCAGTAGATGGGCGTGCTGCTGCTTCTAGCGCCCCAGGC GTCCCGCCCTCTGTGGGGATTCCGGTGGCAGCGGAGGCGGTAGGCGGAGA TGCCGGCGCTAGTAGTAGAAGCAGCCGAAATAGCGGCCGCGGTGACATCG CACCACCGCTGCCAGAACAACCCATCGCCGCCGCGCTCCCAACCGCGACG ATGACGCTCTGCCTGGCCATCTCGTATGGCGGGAGGTCCGAGCTCGCGGC GGCGGCGCGGGAACTGGCCGCCGAGGCCGCCGCCGGCCGCCTGGACCCGG CCGACATCGACGAGCCCGCGCTCGCTCGGCGGCTCAGCACGTCCCGACTG GGCATCCCGGACCCGGACCTGGTCGTGAGGACCTCGGGCGAGAGCCGCCT GTCCAACCTGCTGGTGTGGCAGTCGGCGTACTCGGAGCTGTGCGTCGTGG GGAAGGCCTGGCCAGACTTCCGGCGGCCCGACCTCGTGGAGGCGTTTAGG TGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig760:17489..21841+

>mRNA_Ecto-sp13_S_contig760.18807.1 ID=mRNA_Ecto-sp13_S_contig760.18807.1|Name=mRNA_Ecto-sp13_S_contig760.18807.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1782bp|location=Sequence derived from alignment at Ecto-sp13_S_contig760:17489..21841+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGAAGGGAGGGTTCATACGGCGACGAATTTATGCTGCACCTTGGT
TCTTCTTGCAGTGCTGGTGGCGACGGCGAGCAGCAGTGTGGGTGATGCAC
ACCGGCAGCCTGCCTGCTTTTTGACCCCAACATCAACCTCGACTCCTCTC
TGCAGGAGCAGCAGCAGGAGCAGCAGCAGCAGCAGCAGGCGTCCGGCAGC
CCGGCGTCCTCCATCCGGCTCCACCGACTCTGCAACCACCGCCGCCGGCC
ACCACCACCGATGTCACCCCTCGCTGTCGTCGAGCCCTTTCGCCGCGGGC
GGCCAATGGTGGTCTACGCCGAGCGGTGCTATTCGACGACGCGAGAGCTT
GCCGTTAGCGGCGAGATCACGACCGGCCGTCCGTCGCGGCACCACAACCA
GCGGCGGTGCCACCATCACCAGCAAACACGACGCCGGCGGCGGCGTTGGC
AGTGCGATTCGGAAAAGCTGGAAACGTAGCTGCGGCGAGGGTTCGATGGC
GGCGACGGTCTCCGCCGTCAGCGAGGGCACCGAAACGCGAGAGGGGGAGG
GAGCGGCTGCGGTTGCTGGGGAAGCACGCACCAGTGGAACATGCGGCAGC
AGCAGCAGCAGCAGCAGCGGTAGTGTTCACGGGGGAAGGGGAAGCAGGAG
GAACAACGGCGTTGGTCCTGGAGGGGCGCGTGGAAAAGGAAAACGGGCAG
AAAAAAGAGATAGAGGGGTCCTCTCCCGAGGCATGGCGGCGACGGAACAT
TTCTTCGCGAACGGCAGGAGGCGAAAAAACGGGCGTCAGGCCAAGGGTGA
CGAGTGTGACGTTCGAGGATCGAAGGGAGGGGGGGAGGGGCCAAGGCCGG
CGGCGGCGGCGGCGGCAGCAGCAGCAAAGCTGGAAGGTGAAGAGGAGGCG
AGGGAAGCGGAGGGGCTCCGTGTGGTGCCGCGGCACGTGGCATTCGTCAT
GGACGGTAATGGGCGATGGGCAGCTGACAGAAATTTGCCGCGGAGGACTG
GGCATGCGGAGGGGGCCCGCCGAGCAGGGGAAGCGGTTGAGGAGTGCCGA
CGCCTCGGGGTTGAGTTCGTGACCCTGTACGCGTTTTCGACGGAGAACTG
GAGGCGGCCGGCGGGGGAAGTTTCATTCCTCATGGATCTGATGGAGGAGA
CTCTTCTGGAGCAGCGTGACAGTCTTCGCCGGAACGGAATCCGACTCACA
GCCATCGGGGAGCTCGACCGCCTGCCGGCGCGGCTCCGCTCCCTCCTCCT
AGAGATTCAGGAAGACAGCAACAGCAGCAGCAGTAGCGCAGCAGTAGATG
GGCGTGCTGCTGCTTCTAGCGCCCCAGGCGTCCCGCCCTCTGTGGGGATT
CCGGTGGCAGCGGAGGCGGTAGGCGGAGATGCCGGCGCTAGTAGTAGAAG
CAGCCGAAATAGCGGCCGCGGTGACATCGCACCACCGCTGCCAGAACAAC
CCATCGCCGCCGCGCTCCCAACCGCGACGATGACGCTCTGCCTGGCCATC
TCGTATGGCGGGAGGTCCGAGCTCGCGGCGGCGGCGCGGGAACTGGCCGC
CGAGGCCGCCGCCGGCCGCCTGGACCCGGCCGACATCGACGAGCCCGCGC
TCGCTCGGCGGCTCAGCACGTCCCGACTGGGCATCCCGGACCCGGACCTG
GTCGTGAGGACCTCGGGCGAGAGCCGCCTGTCCAACCTGCTGGTGTGGCA
GTCGGCGTACTCGGAGCTGTGCGTCGTGGGGAAGGCCTGGCCAGACTTCC
GGCGGCCCGACCTCGTGGAGGCGTTTAGGTGA
back to top