prot_Ecto-sp13_S_contig759.18790.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig759.18790.1
Unique Nameprot_Ecto-sp13_S_contig759.18790.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length495
Homology
BLAST of mRNA_Ecto-sp13_S_contig759.18790.1 vs. uniprot
Match: D7G6C1_ECTSI (RanBD1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C1_ECTSI)

HSP 1 Score: 772 bits (1994), Expect = 2.710e-278
Identity = 460/494 (93.12%), Postives = 469/494 (94.94%), Query Frame = 0
Query:    1 MRKRGADGETDSQEVIANRRKARVSGRFRQSLEAKPATTAPSAFAGMAGITFNPGFDDGAGTSGRPATNTFSLGAAPTSAAAGNFKFGSGASGEPTGGGPTGVATAGFSFLNKPPAATPAAAFSKPPVMPKASSPPVPVAASPDTASSTLDSARWVGGAFGEGKTAVQGARLNKRFLSWVSNHLAEGELFLDSGMREYAACAAEIRDRANHAEAGAVSTTAFLHPRGSAAAIPPPRTVQKLSDDSMSKVAEASVSTATPLVTAPASAPSPVVKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGSTSGALTSVAPPATSPSGGFKFDSGGLGAVGSSAGAFNGFKVPSGVAIPPPVAAGSSAADAEEDGMPKEDPSKLERAPGEENEEVVGTFRVKLFRFKMEDKTWGDMGVGMLRLMKHSTNDSRRLVLRNDMGKVLLNAAVYKGMSVTKAKKMIKFAANVGDGLTSFMVKVTADEIDDLHTRVVGLVPRS 494
            MRKR ADGETDSQEVIANRRKARVSGRFRQSLEAKPATTAPSAFAGMAGIT NPGFD GAG SGRPA NTFSLGAAPTSAAAGNFKFGSG   EP GGG TGVATAGFSFLNKPPA T AAA SKPPVMPKASSPPVP +ASPDTASSTLDSARWVGGAFGEGKTAVQGARLNKRFLSWVSNHLAEGELFLDSGMREYAACAAEIRDRANHAEAGAVSTTAFLHPRGSAAA+PPP+TVQK S+DS+S  AEASVSTATP VTAPASAP+P VKS XXXXXXXXXXXXXXXXXXXXXXXXXXX APGST GALTSVAPPATSP GGFKFD GGLGAVGSSAGAFNGFKVPSGVAIPPPVAAGSSAADAEEDGMPKEDPSKLERAPGEENEEVVGTFR KLFRFKMEDKTWGDMGVGMLRLMKH+TNDSRRLVLRNDMGKVLLNAAVYKGMSVT+AKKMIKFAANVGDGLTSFMVKVTADE+DDLHTRVVGLVPRS
Sbjct:   14 MRKRSADGETDSQEVIANRRKARVSGRFRQSLEAKPATTAPSAFAGMAGITPNPGFDYGAGASGRPAKNTFSLGAAPTSAAAGNFKFGSG---EPAGGGSTGVATAGFSFLNKPPATTLAAALSKPPVMPKASSPPVPGSASPDTASSTLDSARWVGGAFGEGKTAVQGARLNKRFLSWVSNHLAEGELFLDSGMREYAACAAEIRDRANHAEAGAVSTTAFLHPRGSAAAVPPPQTVQKPSEDSISMAAEASVSTATPSVTAPASAPAPDVKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXPAPGSTPGALTSVAPPATSPLGGFKFDGGGLGAVGSSAGAFNGFKVPSGVAIPPPVAAGSSAADAEEDGMPKEDPSKLERAPGEENEEVVGTFRAKLFRFKMEDKTWGDMGVGMLRLMKHTTNDSRRLVLRNDMGKVLLNAAVYKGMSVTRAKKMIKFAANVGDGLTSFMVKVTADEVDDLHTRVVGLVPRS 504          
BLAST of mRNA_Ecto-sp13_S_contig759.18790.1 vs. uniprot
Match: A0A3M6VHV7_9STRA (RanBD1 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHV7_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.700e-12
Identity = 42/131 (32.06%), Postives = 80/131 (61.07%), Query Frame = 0
Query:  357 PVAAGSSAADAEEDGMPKEDPSKLERAPGEENEEVVGTFRVKLFRFKMEDKTWGDMGVGMLRLMKHSTNDSRRLVLRNDMGKVLLNAAVYKGMSV----TKAKKM-IKFAANVGDGLTSFMVKVTADEIDD 482
            P +  ++A D +E+ + +E+ + + +A   +++      + K+F FK ++K W D GV  L+++      S R+++RN++GKV+LN+A+YKGM++    TK KK  +  A  + + LT F++KV A  +D+
Sbjct:  328 PTSTSTTAKDQDEENIGREEATVIIKADSSDDDCTFEADKAKVFEFKKDEKRWADKGVHPLKVLVSKDTKSGRILVRNEIGKVVLNSALYKGMAIRPQETKGKKTGVTLALQMDNELTQFLIKVNATRVDE 458          
BLAST of mRNA_Ecto-sp13_S_contig759.18790.1 vs. uniprot
Match: H3GH49_PHYRM (RanBD1 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH49_PHYRM)

HSP 1 Score: 78.6 bits (192), Expect = 6.520e-12
Identity = 45/129 (34.88%), Postives = 79/129 (61.24%), Query Frame = 0
Query:  361 GSSAADAEEDGMPKEDPSKLERAPGEENEEVVGTFRVKLFRFKMEDKTWGDMGVGMLRLMKHSTNDSRRLVLRNDMGKVLLNAAVYKGMSV----TKAKKM-IKFAANVGDG-LTSFMVKVTADEIDDL 483
            G+SA D +E+ + +E+ + + ++   +++      + K+F FK ++K W D GV  L+++ +    S R+++RN++GK++LN+A+YKGM V     K KK  +  A  V  G LT F++KV A  +DDL
Sbjct:  319 GASAQDEDEETIGREEATVIIKSDSPDDDCTFDADKAKIFEFKKDEKRWADKGVHPLKVLVNKQTKSARILVRNEIGKIVLNSALYKGMVVHPHEAKGKKTGVTLALQVEGGELTQFLLKVNAARVDDL 447          
BLAST of mRNA_Ecto-sp13_S_contig759.18790.1 vs. uniprot
Match: W2KID0_PHYPR (RanBD1 domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2KID0_PHYPR)

HSP 1 Score: 77.8 bits (190), Expect = 1.270e-11
Identity = 54/184 (29.35%), Postives = 97/184 (52.72%), Query Frame = 0
Query:  306 GSTSGALTSVAPPATSPSGGFKFDSGGLGAVGSSAGAFNGFKVPSGVAIPPPVAAGSSAADAEEDGMPKEDPSKLERAPGEENEEVVGTFRVKLFRFKMEDKTWGDMGVGMLRLMKHSTNDSRRLVLRNDMGKVLLNAAVYKGMSV----TKAKKM-IKFAANVGDG-LTSFMVKVTADEIDDL 483
            G + G LT+    A +P+GGF F                      G + P   +A ++AA  +E+ + +E+ + + +A   +++      + K+F FK ++K W D GV  L+++      S R+++RN++GK++LN+A+YKGM++     K KK  +  A  V  G +T F++KV A  +D+L
Sbjct:  313 GFSFGNLTAPKSAAPAPTGGFSF----------------------GASAPAATSASTAAAVEDEENIGREEATVIIKADSPDDDCTFEADKAKIFEFKKDEKRWADKGVHPLKVLVSQETKSARILVRNEIGKIVLNSALYKGMAIRPHEAKGKKTGVTLALQVEGGEMTQFLLKVNAARVDEL 474          
BLAST of mRNA_Ecto-sp13_S_contig759.18790.1 vs. uniprot
Match: A0A662X9V3_9STRA (RanBD1 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9V3_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 6.690e-11
Identity = 63/192 (32.81%), Postives = 105/192 (54.69%), Query Frame = 0
Query:  305 PGSTSGALTSVAPPATSPSGGFKFDSGGLGAVGSSA----GAFNGFKVPSGVAIPPP----VAAGSSAADAEEDGMPKEDPSKLERAPGEENEEVVGTFRVKLFRFKMEDKTWGDMGVGMLRLMKHSTNDSRRLVLRNDMGKVLLNAAVYKGMSV----TKAKKM-IKFAANVGDG-LTSFMVKVTADEIDD 482
            P  + G L   +  A SPSGGF F  G L A   S      AF+G K  S  A  P     V + ++A D +E+ + +E+ + + +A   ++E      + K+F FK ++K W D GV  L+++ +    S R+++RN++GK++LN+++YKG++V     K KK  +  A  V DG +  F++KV A  +D+
Sbjct:  400 PAFSFGGLPKPSAAAASPSGGFSF--GNLTAPKPSTMATPPAFSGLKPFSFGASAPAASTAVPSSAAAQDEDEETVGREEATVILKADAPDDECTFEAEKAKVFEFKNDEKRWADKGVHPLKVLVNKETKSARILVRNEIGKIVLNSSLYKGLTVRPHEVKGKKTGVTLALQVEDGSMAQFLLKVNAARVDE 589          
BLAST of mRNA_Ecto-sp13_S_contig759.18790.1 vs. uniprot
Match: M4BXI6_HYAAE (RanBD1 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BXI6_HYAAE)

HSP 1 Score: 75.1 bits (183), Expect = 8.750e-11
Identity = 62/190 (32.63%), Postives = 103/190 (54.21%), Query Frame = 0
Query:  305 PGSTSGALTSVAPP---ATSPSGGFKFDSGGLGAVGSSAGAFNGFKVPSGVAIPPPVAAGSSAADAE-EDGMPKEDPSKLERAPGEENEEVVGTFRVKLFRFKMEDKTWGDMGVGMLRLMKHSTNDSRRLVLRNDMGKVLLNAAVYKGMSV-----TKAKKMIKFAANVGDG--LTSFMVKVTADEIDDL 483
            P  + GALT  A P   +T  +GGF F   G     +SA + +   +  G+++P    + S+  + E E+ + +E+ + + +A   +++      + K+F FK ++K W D GV  L+++    + S R++ RN +GKV+LN+A+YKGMSV     T  KK   + A  GD   LT F++KV    ID+L
Sbjct:  269 PAFSFGALTKPAVPVASSTPATGGFAF---GNMTAATSAVSASSDGLTFGLSVPAASTSTSATVEEENEENIGREEATVIIKADSPDDDCTFEADKAKIFEFKKDEKRWADKGVHPLKVLVSKESKSARILARNAIGKVVLNSALYKGMSVQPHTETTGKKTGVYLALQGDSSDLTRFLIKVNVTRIDEL 455          
BLAST of mRNA_Ecto-sp13_S_contig759.18790.1 vs. uniprot
Match: K3WSW0_GLOUD (RanBD1 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSW0_GLOUD)

HSP 1 Score: 69.3 bits (168), Expect = 9.390e-11
Identity = 32/97 (32.99%), Postives = 62/97 (63.92%), Query Frame = 0
Query:  391 VVGTFRVKLFRFKMEDKTWGDMGVGMLRLMKHSTNDSRRLVLRNDMGKVLLNAAVYKGMSV----TKAKKM-IKFAANVGDGLTSFMVKVTADEIDD 482
            V    + K+F FK ++K W D G+  L+++ +  +   R+++RN++GK++LN+++YKGMS+    TK KK  +  +  V   +T +++KV A ++D+
Sbjct:    9 VFDAEKAKVFEFKKDEKRWADKGLHPLKVLVNKDSKKARILVRNEIGKIVLNSSLYKGMSIKAHETKGKKTGVIVSLQVDGAMTQYLLKVNAAKVDE 105          
BLAST of mRNA_Ecto-sp13_S_contig759.18790.1 vs. uniprot
Match: A0A2P4XK29_9STRA (RanBD1 domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XK29_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 9.410e-11
Identity = 43/132 (32.58%), Postives = 78/132 (59.09%), Query Frame = 0
Query:  356 PPVAAGSSAADAEEDGMPKEDPSKLERAPGEENEEVVGTFRVKLFRFKMEDKTWGDMGVGMLRLMKHSTNDSRRLVLRNDMGKVLLNAAVYKGMSV----TKAKKM-IKFAANVGDG-LTSFMVKVTADEID 481
            P  +  ++A D +E+ + +E+ + + +A   +++      + K+F FK ++K W D GV  L+++      S R+++RN++GK++LN+A+YKGM+V     K KK  +  A  V  G LT F++KV A  +D
Sbjct:  346 PSTSTSAAAGDEDEENIGREEATVIIKADSPDDDCTFEADKAKIFEFKKDEKRWADKGVHPLKVLVSKETKSARILVRNEIGKIVLNSALYKGMAVRPHEVKGKKTGVTLALQVEGGELTQFLLKVNAARVD 477          
BLAST of mRNA_Ecto-sp13_S_contig759.18790.1 vs. uniprot
Match: A0A3F2RSN4_9STRA (RanBD1 domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSN4_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.240e-10
Identity = 41/129 (31.78%), Postives = 77/129 (59.69%), Query Frame = 0
Query:  360 AGSSAADAEEDGMPKEDPSKLERAPGEENEEVVGTFRVKLFRFKMEDKTWGDMGVGMLRLMKHSTNDSRRLVLRNDMGKVLLNAAVYKGMSV----TKAKKM-IKFAANVGDG-LTSFMVKVTADEIDD 482
            A + A D +E+ + +E+ + + +A   +++      + K+F FK ++K W D GV  L+++      S R+++RN++GK++LN+A+Y+G++V     K KK  +  A  V  G LT F++KV A  +D+
Sbjct:  186 ASAPAQDGDEENIGREEATVIIKADSPDDDCTFDVEKAKIFEFKKDEKRWADKGVHPLKVLVSKETKSARILVRNEIGKIVLNSALYEGLAVHPQEAKGKKTGVTLALQVESGELTQFLIKVNAARVDE 314          
BLAST of mRNA_Ecto-sp13_S_contig759.18790.1 vs. uniprot
Match: A0A329S328_9STRA (RanBD1 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S328_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.270e-10
Identity = 42/124 (33.87%), Postives = 75/124 (60.48%), Query Frame = 0
Query:  366 DAEEDGMPKEDPSKLERAPGEENEEVVGTFRVKLFRFKMEDKTWGDMGVGMLRLMKHSTNDSRRLVLRNDMGKVLLNAAVYKGMSV----TKAKKM-IKFAANVGDG-LTSFMVKVTADEIDDL 483
            D EE+ + +E+ + + +A   +++      + K+F FK ++K W D GV  L+++      S R+++RN++GK++LN+A+YKGMS+     K KK  +  A  V  G L+ F++KV A  +D+L
Sbjct:  361 DDEEENIGREEATVIIKADSPDDDCTFEAEKAKIFEFKKDEKRWADKGVHPLKVLVSKETKSARILVRNEIGKIVLNSALYKGMSIRPHEAKGKKTGVTLALQVEGGELSQFLLKVNAARVDEL 484          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig759.18790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6C1_ECTSI2.710e-27893.12RanBD1 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A3M6VHV7_9STRA3.700e-1232.06RanBD1 domain-containing protein n=2 Tax=Peronospo... [more]
H3GH49_PHYRM6.520e-1234.88RanBD1 domain-containing protein n=1 Tax=Phytophth... [more]
W2KID0_PHYPR1.270e-1129.35RanBD1 domain-containing protein n=8 Tax=Phytophth... [more]
A0A662X9V3_9STRA6.690e-1132.81RanBD1 domain-containing protein n=1 Tax=Nothophyt... [more]
M4BXI6_HYAAE8.750e-1132.63RanBD1 domain-containing protein n=1 Tax=Hyalopero... [more]
K3WSW0_GLOUD9.390e-1132.99RanBD1 domain-containing protein n=1 Tax=Globispor... [more]
A0A2P4XK29_9STRA9.410e-1132.58RanBD1 domain-containing protein n=1 Tax=Phytophth... [more]
A0A3F2RSN4_9STRA1.240e-1031.78RanBD1 domain-containing protein n=1 Tax=Phytophth... [more]
A0A329S328_9STRA1.270e-1033.87RanBD1 domain-containing protein n=2 Tax=Phytophth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000156Ran binding domainSMARTSM00160ranbd_3coord: 374..483
e-value: 2.1E-8
score: 33.7
IPR000156Ran binding domainPFAMPF00638Ran_BP1coord: 385..454
e-value: 2.6E-14
score: 53.5
IPR000156Ran binding domainPROSITEPS50196RANBD1coord: 377..451
score: 14.807
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 273..492
e-value: 4.6E-27
score: 97.1
NoneNo IPR availablePANTHERPTHR23138RAN BINDING PROTEINcoord: 92..463
NoneNo IPR availablePANTHERPTHR23138:SF141NUCLEAR PORE COMPLEX PROTEIN NUP50coord: 92..463
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 374..482

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig759contigEcto-sp13_S_contig759:3909..7654 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig759.18790.1mRNA_Ecto-sp13_S_contig759.18790.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig759 3316..7669 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig759.18790.1 ID=prot_Ecto-sp13_S_contig759.18790.1|Name=mRNA_Ecto-sp13_S_contig759.18790.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=495bp
MRKRGADGETDSQEVIANRRKARVSGRFRQSLEAKPATTAPSAFAGMAGI
TFNPGFDDGAGTSGRPATNTFSLGAAPTSAAAGNFKFGSGASGEPTGGGP
TGVATAGFSFLNKPPAATPAAAFSKPPVMPKASSPPVPVAASPDTASSTL
DSARWVGGAFGEGKTAVQGARLNKRFLSWVSNHLAEGELFLDSGMREYAA
CAAEIRDRANHAEAGAVSTTAFLHPRGSAAAIPPPRTVQKLSDDSMSKVA
EASVSTATPLVTAPASAPSPVVKSTPAFSFSAPSALPAAPSGQRFSFAVP
SAPAPGSTSGALTSVAPPATSPSGGFKFDSGGLGAVGSSAGAFNGFKVPS
GVAIPPPVAAGSSAADAEEDGMPKEDPSKLERAPGEENEEVVGTFRVKLF
RFKMEDKTWGDMGVGMLRLMKHSTNDSRRLVLRNDMGKVLLNAAVYKGMS
VTKAKKMIKFAANVGDGLTSFMVKVTADEIDDLHTRVVGLVPRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000156Ran_bind_dom
IPR011993PH-like_dom_sf