mRNA_Ecto-sp13_S_contig7586.18787.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7586.18787.1 vs. uniprot
Match: D8LNX3_ECTSI (Tubulin folding cofactor D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX3_ECTSI) HSP 1 Score: 1002 bits (2591), Expect = 0.000e+0 Identity = 549/619 (88.69%), Postives = 558/619 (90.15%), Query Frame = 1
Query: 1 LEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVSRDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGASPAVLGEVLDALKNAALGRHGPPRSPSLATTDDSAANGISATSDGGGIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQQQQPPSRDSGGGEGRHGSSGVPGXXXX---ADAREGESGAAEAWCPAWLTLADVEGVLATLLKSSEDYSLDKRGDVGSWCRVEALAGMERLLRLAARASRGLPLANRRGNASVQPPVQQAPETFVLPSLEGRLALLDQPPAAVPSPHPCDEVYLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQKLVHSDDPQLPFVPERAAVKHAISHGAATSAAPRAAGGEGKEAVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAKRNPRVVVPLLKTLELLLSNECFDSLPAEEHPFAELLLVAVVAEMKGCRDVRKICLGASVFVCMLNYSAPVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKLLANEEVVDE 1848
LEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPV RDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGASPAVLGE+LDALKNAALGRH PPRSPSLATT IGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQ XXXX DAREGESGAA WCPAWLTLADVEGVLATLL SSEDYS+DKRGDVGSWCRVEALAGMERLLRLAARASRGLPLANRRG ASVQPP QQAPET +LPSL+ RLALLDQPPA+VP+PHPCDEVYLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQKLV SDDPQLPFVPERAAVKHAI+HGAAT A P AAG EGKE VNWAVPATTFPMVVGLLAVAEYHDAIVEGLV+SVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAK NPR+VVPLLKTLELLLSNECFDSLPAE HPFAELLLVAVVAEMKGCRDVRKICLGASVFVCMLNYS PVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKLLANEEVVDE
Sbjct: 749 LEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVGRDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGASPAVLGELLDALKNAALGRHAPPRSPSLATTGXXXXXXXXXXXXXXXIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVDAREGESGAA--WCPAWLTLADVEGVLATLLASSEDYSVDKRGDVGSWCRVEALAGMERLLRLAARASRGLPLANRRGIASVQPPAQQAPETLILPSLQDRLALLDQPPASVPTPHPCDEVYLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQKLVQSDDPQLPFVPERAAVKHAITHGAATPAVPGAAGEEGKEPVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVMSVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAKGNPRIVVPLLKTLELLLSNECFDSLPAE-HPFAELLLVAVVAEMKGCRDVRKICLGASVFVCMLNYSDPVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKLLANEEVVDE 1364
BLAST of mRNA_Ecto-sp13_S_contig7586.18787.1 vs. uniprot
Match: A0A6H5KH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH41_9PHAE) HSP 1 Score: 491 bits (1265), Expect = 1.510e-159 Identity = 270/327 (82.57%), Postives = 280/327 (85.63%), Query Frame = 1
Query: 1 LEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVSRDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGASPAVLGEVLDALKNAALGRHGPPRSPSLATTDDSAANGISATSDGGGIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQQQQPP---------SRDSGGGEGRHGSSGVPGXXXXADAREGESGAAEAWCPAWLTLADVEGVLATLLKSSEDYSLDKRGDVGSWCRVEALAGMERLLRLAARASRGLPLANRRGNASVQPPVQQAP 954
LEKARLYRGRGGELMRQAACRLVECLAL KSEV+IK+QLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPV RDGPSERLRTRTIGLYVGGLRT+ENAAVARGYAMALGVLPRKLAGASPAVLGEVLDALK+AALGRHGPPRSPS ATT AANG + T+ GG IGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQQQ S++ G GEGRH S GV DA EGESGAA AWCPAWLTLADVEGVLATLL SSEDYS+DKRGDVGSWCRVEAL GMERLLRLAARASRGLPLANR + V AP
Sbjct: 639 LEKARLYRGRGGELMRQAACRLVECLALAKSEVSIKSQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVGRDGPSERLRTRTIGLYVGGLRTQENAAVARGYAMALGVLPRKLAGASPAVLGEVLDALKDAALGRHGPPRSPSPATTGGGAANGTTETNGGGDIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQQQXXXXXXXXXXXXSQEPGSGEGRHDSGGVSSGGSGVDAPEGESGAAAAWCPAWLTLADVEGVLATLLASSEDYSVDKRGDVGSWCRVEALEGMERLLRLAARASRGLPLANRESGGKEEDVVVSAP 965
BLAST of mRNA_Ecto-sp13_S_contig7586.18787.1 vs. uniprot
Match: A0A6H5KHZ4_9PHAE (TFCD_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHZ4_9PHAE) HSP 1 Score: 456 bits (1173), Expect = 9.940e-153 Identity = 238/251 (94.82%), Postives = 243/251 (96.81%), Query Frame = 1
Query: 1096 QLSEKLDSVRERAGTVLQKLVHSDDPQLPFVPERAAVKHAISHGAATSAAPRAAGGEGKEAVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAKRNPRVVVPLLKTLELLLSNECFDSLPAEEHPFAELLLVAVVAEMKGCRDVRKICLGASVFVCMLNYSAPVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKLLANEEVVDE 1848
+LSEKLDSVRERAGTVLQKLV SDDPQLPFVPERAAVKHAI+HGAAT AAP AAG EGKEAVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAK NPR+VVPLLKTLELLLSNECFDSLPAEEHPFAELLLVAVVAEMKGCR+V KICLGASV VCMLNYS PVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKLLANE+VVDE
Sbjct: 106 KLSEKLDSVRERAGTVLQKLVQSDDPQLPFVPERAAVKHAITHGAATPAAPGAAGEEGKEAVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAKGNPRIVVPLLKTLELLLSNECFDSLPAEEHPFAELLLVAVVAEMKGCRNVGKICLGASVLVCMLNYSDPVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKLLANEDVVDE 356
BLAST of mRNA_Ecto-sp13_S_contig7586.18787.1 vs. uniprot
Match: A0A835ZJS0_9STRA (Tubulin folding cofactor D n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJS0_9STRA) HSP 1 Score: 322 bits (826), Expect = 6.990e-93 Identity = 245/653 (37.52%), Postives = 320/653 (49.00%), Query Frame = 1
Query: 1 LEKARLYRGRGGELMRQAACRLVECLALTKS-EVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVSRDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGASPAVLGEVLDALKNAALGRHGPPRSPSLATTDDSAANGISATSDGGGIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQQQQPPSRDSGGGEGRHGSSGVPGXXXXADAREGESGAAEAWCPAWLTLADVEGVLATLLKSSEDYSLDKRGDVGSWCRVEALAGMERLLRLAARASRGLPLANRRGNASVQPPVQQAPETFVLPSLEGRLALLDQ---------PPAAVPSPHPCDEVYLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQKLVHSDDPQLPFVPERAAVKHAISHGAATSAAPRAAGGEGKEAVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMF---------------------------GDAKRNPRVVVPLLKTLELLLSNECFDSLPAEEHP-FAELLLVAVVAEMKGCRDVRKICLGASVFVCMLNYSAPVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKLLANEEVVD 1845
LE+A LYRGRGGE +R AACRL EC AL+ + E+ +RLLD+ DE LR E VQ +AAAA +A+L E L R + +V GL A ARG+A+ALG LPR LA A VL AL +A + G +GG G DAETRRNAV +L +CE VG G SGGG G A LT AD V A LL++++DY DKRGDVGSWCRV A+ +ER+ RLA ASRG+PL A+ PP+ +P+L GR + PP A E Y TP V+ A+LKQLSEKLD+VR+ AG LQ+L+ + P +P++P R ++ A+ AAP NWA A FP + L++ Y A+ GLV+SVGGL+ESVV S+ ALL W RA +A + AV+ L LV + G R+ RV +P L+TL+LLL+N+ F LPA LL A ++GCR V K+C GA + + + V ALR++V L RFP+VR+ VAE MY++LLA E+ D
Sbjct: 712 LERANLYRGRGGEAVRAAACRLAECAALSDAVELTAPQLVRLLDTCDECLRQVSEDVQRAAAAAARALLRRACAGGAGAADEALFERAVAAHVRGLAEAAAPAEARGHALALGALPRPLAARDAAARARVLTAL--------------------------AAACAPGARVGGEG---DAETRRNAVAALAAVCETVGFG---------VSGGGGG-----------------------------AGLTAADAAAVFAALLRATDDYGTDKRGDVGSWCRVAAMHALERMARLAVAASRGIPLERAPAAAATAPPL--------VPALSGRQPFMQVAVVNGAVAVPPRARRRAAAAAEAYWTPVDAAAVVRALLKQLSEKLDAVRDHAGQALQRLLAARAPAIPYIPLRPQLEAALG---VRGAAPPP---------NWASAADAFPRIARALSLPSYQSAVAAGLVVSVGGLTESVVKQSAAALLAWARAAGAA-DPSAVSQLGATLVALLNGCNAAAXXXXXXXXXXXXXXXXXXXXGSGDRD-RVALPALRTLDLLLANDAFAPLPAPARARLGAELLAAARGALRGCRFVAKLCAGAGALMGLAAWPDGVGRGALRSAVALLAQRFPHVRRHVAELMYVRLLAWEDAED 1275
BLAST of mRNA_Ecto-sp13_S_contig7586.18787.1 vs. uniprot
Match: B8BSV8_THAPS (Tubulin-specific chaperone d (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSV8_THAPS) HSP 1 Score: 295 bits (755), Expect = 6.140e-84 Identity = 205/609 (33.66%), Postives = 303/609 (49.75%), Query Frame = 1
Query: 1 LEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVSRDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGASPAVLGEVLDALKNAALGRHGPPRSPSLATTDDSAANGISATSDGGGIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQQQQPPSRDSGGGEGRHGSSGVPGXXXXADAREGESGAAEAWCPAWLTLADVEGVLATLLKSSEDYSLDKRGDVGSWCRVEALAGMERLLRLAARASRGLPLANRRGNASVQPPVQQAPETFVLPSLEGRLALLDQPPAAVPSPHPCDEVYLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQKLVHSDDPQLPFVPERAAVKHAISHGAATSAAPRAAGGEGKEAVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAKRNPRVVVPLLKTLELLLSNECFDSLPA-EEHPFAELLLVAVVAEMKGCRDVRKICLGASV-FVCMLNYSAPVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKL 1821
+EKARLYRGRGGE+MR AACR +EC++ + +K Q+RLLDSVD L H E++Q SAA AL A+L ++FPVS GPSERL++R + Y+ +++E+N A RG+++ALG LP KL S VL VLD L +A+ + +L GGE DAETRRNA+ SL+ +C+ G+G + + LT E V A LL + EDY++D+RGDVGSW RV A+ G+E L L+ A + + ++ A+LKQL EKLD+VR AG L++L+ +++P+LPFVP R + A+ K+ NW+ PA TFP+++ + + + D I+ GLVISVGGL+ESV SS +L W+R +SA+ + + +G+F KRN RV++PLL TL+ LLS+ D L + ++ F L++ + E KGC DV+++ V F + + ++ AL + L + +P VR+ VAE ++ KL
Sbjct: 621 IEKARLYRGRGGEIMRAAACRTIECISTANITLTVKQQVRLLDSVDACLVHPNETIQNSAAKALLALLTSYFPVSSKGPSERLQSRVVDKYISIVKSEDNPAATRGFSLALGHLPGKLLAPSEQVLDSVLDCLIHAS-------KKSTLV----------------------GGEGDAETRRNAILSLINVCKTAGIGHSSLEANLSPTNS----------------------------------LTTCQTERVFAALLSAMEDYNMDRRGDVGSWSRVAAMNGLEALTYLSYSAK-----------------------------------------------------FFDEGLCCSILSALLKQLGEKLDAVRCEAGECLERLLTNNNPRLPFVPHRTMLIRALDLN--------------KQGKNWSNPAMTFPLLMCAINIDVFLDPILSGLVISVGGLTESVSKSSSASLFEWIRDLRSAKATSKLYQMGEVFLGLFDKNKRNGRVLLPLLATLDKLLSHGYMDELLSRKDGAFLSCLMICLSNESKGCSDVKRLLAIVGVSFNVIQPHLETMKEMALPFIMTMLLNSYPRVRRYVAEQLFAKL 1099
BLAST of mRNA_Ecto-sp13_S_contig7586.18787.1 vs. uniprot
Match: A0A7S3Q9K5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9K5_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.820e-81 Identity = 210/640 (32.81%), Postives = 334/640 (52.19%), Query Frame = 1
Query: 1 LEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVSRDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGASPAVLGEVLDALKNAALGRHGPPRSPSLATTDDSAANGISATSDGGGIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQQQQPPSRDSGGGEGRHGSSGVPGXXXXADAREGESGAAEAWCPAWLTLA----DVEGVLATLLKSSEDYSLDKRGDVGSWCRVEALAGMERLLRLAARASRGLPLANRRGNASVQPPVQQ-APETFVLPSLEGRLALLD-----QPPAAVPSPHP-------CDEVYLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQKLVHSDDPQL-PFVPERAAVKHAISHGAATSAAPRAAGGEGKEAVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAKRNPRVVVPLLKTLELLLSNECFDS-LPAEEHPFAELLLVAVVAEMKGCRDVRKICLGASVFVCMLNYS-APVRPKALRNSVLFLGHRFPNVRKTVAEAMYLKLLANEEVVDEVNTV 1860
+EKARLYRGRGGE+MR A RL+EC+AL + + +K Q+ LLDS+D +L+H E +Q++A++AL +++ ++FPV GPSERL++R + YV +R +EN A RGY++ALG LP KL + L V+D L + H PS GG+ DAETRRN+++SLV +C+ VGVG ADA P++ T+A V V L + EDY+ D+RGDVGSW R+EA+ GME L L +AS N S P + + +PS+ RL L+ + + + P + Y +V +V+ ++LKQLSEKLD+VR +AG+ L++++ + PFVP +A + A+ + P NW+ PA TFP+++ + + + ++I+ G++ISVGGL+ES+ SSKAL+ ++RA + + +A + L+ +F ++ RV++PLL T++ LLS+ D+ L + + F++ L + V E C D++++ V + +L+ A + L + L H+FP VR+ AE +Y+KL+ +E VV +
Sbjct: 823 IEKARLYRGRGGEIMRAAVSRLIECMALAQVPMNVKQQIGLLDSLDANLKHPNEIIQVAASSALYSLMRSYFPVRESGPSERLQSRVVDKYVESVRGDENPAATRGYSLALGYLPAKLLAPTVEGLDAVIDCL---CVSSH-----PSTLI---------------------GGQGDAETRRNSIKSLVRICQVVGVG---------------------------ISADAN-----------PSYPTVAMDGSQVMRVFKALFDAVEDYNTDRRGDVGSWSRIEAMKGMEALTYLVIKAS------NIPHTMSCGPEENENTKDVPCVPSIARRLRYLEADVSTRVRSCLSESKPFRQFSYSSTQTYFDDELVSKVLSSILKQLSEKLDAVRGQAGSCLERMLSEKTSIIVPFVPSKALLLEALR----LNDIPLQH--------NWSNPAVTFPLMMKAINIEAFFESILAGMIISVGGLTESITKSSSKALMDYMRALHKIKAVGKIAKIGHGLIKLFDKHTKDGRVILPLLVTVDKLLSHGLLDAILVSPTNDFSKDLSLRVRREASRCNDIKRLMAIVPVALSILHCEVAETQNTTLLFLMRLLAHKFPRVRRHTAEQLYIKLVEDESVVPNATNI 1377
BLAST of mRNA_Ecto-sp13_S_contig7586.18787.1 vs. uniprot
Match: B5Y3W4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y3W4_PHATC) HSP 1 Score: 255 bits (651), Expect = 2.070e-69 Identity = 207/633 (32.70%), Postives = 301/633 (47.55%), Query Frame = 1
Query: 1 LEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVSRDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGASPAVLGEVLDALKNAALGRHGPPRSPSLATTDDSAANGISATSDGGGIGGPGGEPDAETRRNAVRSLVTLCEEVG---VGRQQQQPPSRDSGGGEGRHGSSGVPGXXXXADAREGESGAAEAWCPAWLTLADVEGVLATLLKSSEDYSLDKRGDVGSWCRVEALAGMERLLRLAARASRGLPLANRRGNASVQPPVQQAPETFVLPSLEGRLALLDQPPAAVPSPHPCDEVYLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQKLVHSDDPQLPFVPERAAVKHAISHGAATSAAPRAAGGEGKEAVNWAVPATTFPMVVGLLAV-----------AEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAKRNPRVVVPLLKTLELLLSNECFDSL---PAEEHPFAELLLVAVVAEMKGCRDVRKICLGASVFVCMLNYSAPVRPKALRNSVLFL-----GHRFPNVRKTVAEAMYLKLLANE 1833
+EK RLYRGRGGE+MR A CRL+EC+A+ K ++++ Q+RLLDS+D S+ H ES+Q +A AL+ +L ++FPV +GPS+RL+ R + +V + E N A RGY A+G LP KL + +VL ++D L+ AA R SL GGE DAE+RRN+++SL ++ EVG V RQ + P L ++ V EDYS+D+RGDVGSW RV ++ M LL T V AA+P+P D+ S+ RV+ +++KQLSEK+DSVR++AG L +++ + FVP RA + A+ G E + NW+ + TFP VV LL++ A Y+ +++ GL++S GGL+ESV +S L+ + + C+ R L LA L+ +F + R V+PLLKTLE +L+ FD+L P H FA + +V E + CRDV ++ V V +L P P A+ + + L H FP VR AE YL LL N+
Sbjct: 721 IEKKRLYRGRGGEIMRSAVCRLIECIAIAKLPLSVQEQVRLLDSIDASIPHPSESIQDNACCALQVLLVSYFPVGVNGPSQRLQRRIVDKFVNIISNETNPAATRGYVKAIGYLPAKLLAPNRSVLAGIIDCLRKAA-------RYDSLV----------------------GGESDAESRRNSLQSLSSIASEVGIVDVSRQSENPQVS--------------------------------------LGRNLLDTVFDCFFLGLEDYSIDRRGDVGSWSRVASMDAMVELL------------------------------TKV---------------AAIPNPTLFDQ-----SVPYRVVSSIVKQLSEKIDSVRQKAGDCLTRVMLLSSIAV-FVPCRAEIVEAL-------------GIEDENDHNWSDASFTFPRVVKLLSLNIEKGEDQRCGALYYTSVLSGLIVSAGGLTESVNKEASFVLIEFAKQCQGTRELEK---LATCLMDLFEEHVGKGRFVLPLLKTLEKMLAYRVFDTLLLDPQTSH-FATRCMDCLVREERSCRDVPRLLQLTKVIVALL----PGVPDAVEHRGVALLCKLTSHPFPRVRSHTAEQFYLVLLENQ 1214
BLAST of mRNA_Ecto-sp13_S_contig7586.18787.1 vs. uniprot
Match: K0R7E2_THAOC (TFCD_C domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R7E2_THAOC) HSP 1 Score: 241 bits (616), Expect = 6.160e-65 Identity = 171/493 (34.69%), Postives = 246/493 (49.90%), Query Frame = 1
Query: 1 LEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVSRDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGASPAVLGEVLDALKNAALGRHGPPRSPSLATTDDSAANGISATSDGGGIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQQQQPPSRDSGGGEGRHGSSGVPGXXXXADAREGESGAAEAWCPAWLTLADVEGVLATLLKSSEDYSLDKRGDVGSWCRVEALAGMERLLRLAARASRGLPLANRRGNASVQPPVQQAPETFV-LPSLEGRLALLDQPPAAVPSPHPCDE----VYLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQKLVHSDDPQLPFVPERAAVKHAISHGAATSAAPRAAGGEGKEAVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLRACKSARNL 1464
+EK RLYRGRGGE+MR AACRL+EC+++++ +++K Q+RLLDS+D L H E +Q AA AL A++ ++FPV + GPS RL+ R + Y+G + +E+N A RG+ +ALG LP KL S VL +L L +A+ R +L G E DAETRRNA+ SLV +C VG+ ++ P DS CP L +E V ++ ++ +DYS D+RGDVGSW R+ A+ G+ L LA RA+ P + + A E PSL R V PC Y ++ ++ A+LKQL EKLD+VR +AG L++L+ S DPQ PFVP R A G W+ P+ TFP++ ++++ ++ I+ G VISVGGL+ESV S AL W++ +S + L
Sbjct: 738 IEKRRLYRGRGGEVMRAAACRLIECISVSRLPLSVKQQVRLLDSIDACLVHPTEGIQKIAAQALGALMYHYFPVGKSGPSSRLQGRVVDKYIGIIGSEDNPAATRGFCLALGHLPPKLLAPSSVVLDSILSCLIDAS-------RKDTLV----------------------GNEGDAETRRNALLSLVKVCTAVGLVTNEKSPS--DS--------------------------------CP--LNKCQLERVFKSMFEALQDYSTDRRGDVGSWSRMVAIDGIVTLAYLAIRATTTFPHSCK---------AHAATEKLADAPSLSQR---------RVQRLKPCGRSFRLTYFDENLAHSILDALLKQLGEKLDTVRCKAGESLERLLFSSDPQFPFVPHRELFLQAFRIG---------------NVKTWSDPSVTFPLLFRVISIDDFATPILAGAVISVGGLTESVAKSSCAALFDWVKCLRSTKTL 1132
BLAST of mRNA_Ecto-sp13_S_contig7586.18787.1 vs. uniprot
Match: A0A4D9D438_9STRA (TFCD_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D438_9STRA) HSP 1 Score: 239 bits (611), Expect = 5.250e-64 Identity = 223/716 (31.15%), Postives = 316/716 (44.13%), Query Frame = 1
Query: 1 LEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVSRDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGAS-PAVLGEVLDALKNAALGRHGPPRSPSLATTDDSAANGISATSDGGGIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQQQQPPSRDSGGGEGRHGSSGVPGXXXXADAREGESGAAEAWCPAWLTLADVEGVLATLLKSSEDYSLDKRGDVGSWCRVEALAGMERLLRLAARASRGLPLA----NRRGNASVQPPVQQAP---------------------ETFVLPSLEGRLALLDQPPAAVPSPHPC------DEV-------------------------------YLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQKLVHSDDPQLPFVPERAAVKHAISHGAATSAAPRAAGGEGKEAVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLR----------------ACKSARNLRA-VAGLALRLVGMFGDAKRNPRVVVPLLKTLELLLSNECF--------------DSLPAEEHPFAELLLVAVVAEMKGCRDVRKI--CLGASVFVCM-LNYSAPVRPK-----ALRNSVLFLGHRFPNVRKTVAEAMYLKLLANEEVV 1842
+E+ARLYRGRGGEL+R AACRL+ECLAL +++KTQLRLLDS+DE+LRH ++V+ A AA++A +F D PS R++ R + Y + T+EN A+ RG+ ALG LP +L S PA+L + L P R G EPDAETRRN + +L + E +GV + GGE R+G G + A V +++ LLK ++DY++DKRGDVGSW R+ AL G+E+ + L R GL +R G Q P++ E P G P + C DEV ++P + ++ AVLKQL EKLD+VRE AG VL + LP + A T A + EG ++ A +P VV LL V YH+AIV GLVISVGGL+ESVV S A++ W R ACK + + + L+G+F + N RV++PLL++L+L D A + + L ++ E+ GCR+V K+ CL ++ + L + A + ALR +L LGHRFP VRK A+ +Y LL ++ ++
Sbjct: 712 IEQARLYRGRGGELVRAAACRLIECLALALVPLSVKTQLRLLDSLDENLRHPTDAVRAHAVAAIRAFTHAYFGRGMDEPSARVQARVVDKYRRLVETDENVALTRGFLRALGALPSRLLFPSFPALLDTIETQLA--------PDRRV-------------------------GDEPDAETRRNGILALGEMAETLGV----------EVSGGE-----------------RKGARG---------MNRAQVHRLISLLLKGTDDYAMDKRGDVGSWVRMAALQGLEKTVTLVRRGGGGLTGGAVEDSREGWQDGQRPLRVGDWVLTTHGRGQVRDLRCNEHLCEIAFPPGQAGAYLFPYGPGCGLFPRQSCQPLSVSDEVKDARTDDAAATAVGTASIGDAEVARFASSTSLISPELTTAIVSAVLKQLCEKLDAVRECAGRVLSTI-------LPLARDAEAYS--------TLLAAFLSEAEGGFSLKGGDSAAVYPRVVRLLGVRAYHEAIVAGLVISVGGLTESVVKASVAAVVEWARQQRLSKRERQEECRSNACKDGHKMPPRLQEFSESLLGLFDAHRGNDRVIMPLLRSLDLFYQKGVLVPRAQAAGWEVGSEDGKHAGKASLSWRLADRLLREVTGCRNVTKLLACLRVALHLLSPLTFRAGQEEEEAGAAALRLVLLLLGHRFPRVRKLAAQELYTALLLHDHLL 1343
BLAST of mRNA_Ecto-sp13_S_contig7586.18787.1 vs. uniprot
Match: A0A1E7FHM6_9STRA (ARM repeat-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHM6_9STRA) HSP 1 Score: 229 bits (584), Expect = 1.510e-60 Identity = 183/622 (29.42%), Postives = 284/622 (45.66%), Query Frame = 1
Query: 1 LEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRHAVESVQLSAAAALKAVLENWFPVSRDGPSERLRTRTIGLYVGGLRTEENAAVARGYAMALGVLPRKLAGASPAVLGEVLDALKNAALGRHGPPRSPSLATTDDSAANGISATSDGGGIGGPGGEPDAETRRNAVRSLVTLCEEVGVGRQQQQPPSRDSGGGEGRHGSSGVPGXXXXADAREGESGAAEAWCPAWLTLADVEGVLATLLKSSEDYSLDKRGDVGSWCRVEALAGMERLLRLAARASRGLPLANRRGNASVQPPVQQAPETFVLPSLEGRLALLDQPPAAVPSPHPCDEVYLTPSMVERVMCAVLKQLSEKLDSVRERAGTVLQKLVHSDDPQLPFVPERAAVKHAISHGAATSAAPRAAGGEGKEAVNWAVPATTFPMVVGLLAVAEYHDAIVEGLVISVGGLSESVVTHSSKALLRWLRACKSARNLRAVAGLALRLVGMFGDAKRNPRVVVPLLKTLELLLSNECFDSLPAEEHPFAELLLVAVVAEMKGCRDVRKICLGASVFVCMLNYSAPVRPKALRNSVL------FLGHRFPNVRKTVAEAMYLKLLANEEVVDE 1848
+EK RLYRG+GGE MR A CRL+ C++++ + + Q+RLLDS+D + H E +Q A AL A+ ++FPVS GPS+RL+ R + Y RT N A RGY++ALG LP KL S VL L L R P + G + DAETRRNA+ SL + E VG+ PSR+ + C + ++ V T ++S EDY+ D+RGDVGS CR+ A+ G+ L A++ + E+ V ++Y T + R++ +LKQ SEKLDSVR A L L+ P ++ +R + A++ P+ G ++ NWA + T+PMV+ + EY ++ GL++S GGL++SV +SS L++W+R+ + R L +F K RV++PLLKT+++L++ C + L F+ LL + E K C D+++I V +LN + + + + + FL H+FP +R AE +Y++LL + + E
Sbjct: 721 IEKKRLYRGKGGEQMRAAVCRLIACISMSHIPLTVPQQVRLLDSIDTCIPHPTEMIQEQAGRALFALARSYFPVSGKGPSDRLQKRVVDKYTNEARTSINPAATRGYSLALGYLPAKLLAPSLDVLDISLSCLC-----RISHPNAK------------------------VGNDKDAETRRNALVSLSRILETVGI------VPSRE------------------------------QCECVVAFSNVQLKQVFDTYMRSMEDYNTDQRGDVGSKCRLAAMNGLVSL-------------------ATITTDQKHIEESGV-------------------------DLYST-ELCLRIIGLLLKQFSEKLDSVRSEAAGCLLTLLDEKSPVKAYITKRQILLDALTP-------PQFKGTLTYQSSNWAEASITYPMVMKAAEIDEYFGYVISGLILSTGGLTKSVTQNSSLVLIQWVRSADEVKLDR----LGTVFFEIFDKHKYEGRVILPLLKTIDILMNRRCIEQL-IRNKLFSLSLLGKLREESKRCMDMQRI-------VAILNVATGLITSIVESKEIVAFVCDFLVHQFPRIRSLAAEKLYVRLLETDPDLGE 1213 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7586.18787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7586.18787.1 >prot_Ecto-sp13_S_contig7586.18787.1 ID=prot_Ecto-sp13_S_contig7586.18787.1|Name=mRNA_Ecto-sp13_S_contig7586.18787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=626bp LEKARLYRGRGGELMRQAACRLVECLALTKSEVAIKTQLRLLDSVDESLRback to top mRNA from alignment at Ecto-sp13_S_contig7586:916..7400- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7586.18787.1 ID=mRNA_Ecto-sp13_S_contig7586.18787.1|Name=mRNA_Ecto-sp13_S_contig7586.18787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6485bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7586:916..7400- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7586:916..7400- >mRNA_Ecto-sp13_S_contig7586.18787.1 ID=mRNA_Ecto-sp13_S_contig7586.18787.1|Name=mRNA_Ecto-sp13_S_contig7586.18787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1878bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7586:916..7400- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |