prot_Ecto-sp13_S_contig7582.18781.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7582.18781.1
Unique Nameprot_Ecto-sp13_S_contig7582.18781.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length372
Homology
BLAST of mRNA_Ecto-sp13_S_contig7582.18781.1 vs. uniprot
Match: Q8QNN8_ESV1K (EsV-1-23 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNN8_ESV1K)

HSP 1 Score: 592 bits (1527), Expect = 1.020e-207
Identity = 321/377 (85.15%), Postives = 344/377 (91.25%), Query Frame = 0
Query:    1 MATSQNYDNDLARAVAMAMKKSGITIAPVPAQKAKKNSAREAXXXXXX---QARALLRLQEDLV--QKRVGAEGVVCRSGRPRAKRVRYDPSTAKKRVSPSKSAPKILDPTRSTVDDRVETARTRARGRKQESANKNQCNVIEFMKRVADPAKNKEEKYANTKGLLVAHGMGSGKTLTSLWVAKEYVTKNRVKFVNILAPNAAVGEFIDSFERAGITPRIAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTGIKYDALAKAGVSFLMLLSGTPAPNTPSEIVPLINLLCRKKKDHWTRQKWDKSTTTLSEKKRVLRDKVSTYNIGPKYNYLRERETEFPSANNFPGFKVSTRNVKLSPSQNAAYMKLDKTVKK 372
            MAT  NY+NDLA AVA+AMKK+GIT APV A+K KKNS REA  XXXX   QARALLRLQEDLV  +KRV   G+V RSGRPRAKRVRYDPSTAKKRVSPSKSAP+IL+PTRSTVD RV+TARTRA+GR QE+  KNQCNVIEFMKRVADP +NKEEKYANTKGLL+AHGMGSGKTLTSLWVAKEY+ KNRVKFVNILAPN AVGEFIDSFERAGITP+ AGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTG+KYDALAKA VS+LMLLSGTPAPN PSEIVPLINLL RK++DHWTRQKWDKSTTT SEKK+ LRDKVS YNIGPKYNYLR+R TEFPSANNFPG+KVSTRNVKLSPSQNAAYMKL+KTVKK
Sbjct:    1 MATLPNYENDLAIAVAIAMKKNGITFAPVSAEKEKKNSVREAEAXXXXXXXQARALLRLQEDLVPSKKRVDVGGMVGRSGRPRAKRVRYDPSTAKKRVSPSKSAPEILNPTRSTVDARVDTARTRAQGRNQETQKKNQCNVIEFMKRVADPTRNKEEKYANTKGLLIAHGMGSGKTLTSLWVAKEYIAKNRVKFVNILAPNVAVGEFIDSFERAGITPQTAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTGMKYDALAKADVSYLMLLSGTPAPNAPSEIVPLINLLHRKREDHWTRQKWDKSTTTPSEKKKFLRDKVSMYNIGPKYNYLRQRGTEFPSANNFPGYKVSTRNVKLSPSQNAAYMKLNKTVKK 377          
BLAST of mRNA_Ecto-sp13_S_contig7582.18781.1 vs. uniprot
Match: D8LP58_ECTSI (Helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP58_ECTSI)

HSP 1 Score: 577 bits (1486), Expect = 1.530e-201
Identity = 311/377 (82.49%), Postives = 334/377 (88.59%), Query Frame = 0
Query:    1 MATSQNYDNDLARAVAMAMKKSGITIAPVP--AQK-AKKNSAREAXXXXXXQARALLRLQEDLV--QKRVGAEGVVCRSGRPRAKRVRYDPSTAKKRVSPSKSAPKILDPTRSTVDDRVETARTRARGRKQESANKNQCNVIEFMKRVADPAKNKEEKYANTKGLLVAHGMGSGKTLTSLWVAKEYVTKNRVKFVNILAPNAAVGEFIDSFERAGITPRIAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTGIKYDALAKAGVSFLMLLSGTPAPNTPSEIVPLINLLCRKKKDHWTRQKWDKSTTTLSEKKRVLRDKVSTYNIGPKYNYLRERETEFPSANNFPGFKVSTRNVKLSPSQNAAYMKLDKTVKK 372
            M  SQNY+NDLA AVA+AMKKSGIT AP P  A+K  KKNS +EA       AR +LRLQEDLV  QKRVG  GVV RSGRPRAKRVRYDPS  KKRV PSK APK+L+PTRSTVDDRV+TARTRA GRKQE+  +NQCNVIEFMKRVADP KNKE++YANTKGLL+AHGMGSGKTLTSLWVAKEY+ KNRVKFVNILAPN AVGEFIDSFERAGITP+IAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTGIKYDALAKA VS+LMLLSGTPAPN PSEIVPLINLL RKKKD+WT+QKWDKSTTT SEKK+ LRDKVS YNIGPKYNYLR+R TEF SAN FPG+KVS RNVKLSPSQNAAY+KL+KTVKK
Sbjct:    1 MTVSQNYENDLAMAVAIAMKKSGITFAPSPISAEKDTKKNSIKEAEAKKKKIARQMLRLQEDLVSSQKRVGVGGVVGRSGRPRAKRVRYDPSAEKKRVRPSKPAPKMLNPTRSTVDDRVDTARTRALGRKQETEKRNQCNVIEFMKRVADPTKNKEKQYANTKGLLIAHGMGSGKTLTSLWVAKEYIAKNRVKFVNILAPNVAVGEFIDSFERAGITPQIAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTGIKYDALAKADVSYLMLLSGTPAPNAPSEIVPLINLLYRKKKDNWTKQKWDKSTTTSSEKKKFLRDKVSMYNIGPKYNYLRKRGTEFHSANKFPGYKVSMRNVKLSPSQNAAYVKLNKTVKK 377          
BLAST of mRNA_Ecto-sp13_S_contig7582.18781.1 vs. uniprot
Match: A0A6H5JDR8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR8_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 1.760e-85
Identity = 159/226 (70.35%), Postives = 176/226 (77.88%), Query Frame = 0
Query:   61 VQKRVGAEGVVCRSGRPRAKRVRYDPSTAKKRVSPSKSAPKI-LDPTRSTVDDRVETARTRARGRKQESANKNQCNVIEFMKRVADPAKNKEEKYANTKGLLVAHGMGSGKTLTSLWVAKEYVTKNRVKFVNILAPNAAVGEFIDSFERAGITPRIAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTGIKYDALAKAGVSFLMLLSGTPAPNTPSEIVPLIN 285
            +QKRV   GVV RSGRP+AKRV+YDP TAKKRVS SKSAP + LDPTRST DDRVE+A TRARGRKQE+  K +CNVI+FMKRVAD  KN+E+ YANTK                           +VKFVNILA N AVGE I+SFERAGITP+IAGKIRVLTHD FALN+KAR+FS+SLVIVDEAHMFT IKYDALAKA VS+LMLLSGTPAPN PSEIVPLIN
Sbjct:  432 LQKRVRVGGVVGRSGRPQAKRVQYDPGTAKKRVSSSKSAPTVGLDPTRSTFDDRVESANTRARGRKQETDKKKKCNVIDFMKRVADLTKNEEKIYANTK---------------------------KVKFVNILASNVAVGELINSFERAGITPQIAGKIRVLTHDGFALNRKARKFSRSLVIVDEAHMFTAIKYDALAKADVSYLMLLSGTPAPNVPSEIVPLIN 630          
BLAST of mRNA_Ecto-sp13_S_contig7582.18781.1 vs. uniprot
Match: A0A1Y1IQ76_KLENI (Chromodomain helicase DNA binding protein 8 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQ76_KLENI)

HSP 1 Score: 65.5 bits (158), Expect = 6.950e-8
Identity = 58/219 (26.48%), Postives = 104/219 (47.49%), Query Frame = 0
Query:  158 KGLLVAHGMGSGKTLTSLWVAKEYVTKNRVKFVNILAPNAAVGEFIDSFERAGITPRIAGKIRVLTHDEFALNKKAREF--SKSLVIVDEAHMF---TGIKYDAL-AKA-GVSFLMLLSGTPAPNTPSEIVPLINLLCRKKKDHWTRQKWDK--STTTLSEKKRVLRDKVSTYNIGPKYNYLRERETEFPSANNFPGFKVSTRNVKLSPSQNAAYMKLD 367
            +GL++  G+GSGKTL+S+  A+  +    VK + ++ P + +  +     +       A K  V++ + F    +   F     L++VDEAH      G +  A+ A+A G + ++LL+GTP  N PS+I PL N+L +      T++ +D     T L   +  L+  +    +   Y      + E+PS        +ST NV++  ++     +LD
Sbjct:  254 RGLILYFGVGSGKTLSSMAAAEALMNHGIVKSIVVVTPASLIANYKKELSKFHAK---ADKYNVMSFENFTKKAEGGTFLTKDKLLVVDEAHNLRNAAGQRSKAIFAQAKGATKVLLLTGTPVQNAPSDIAPLANMLRKHNAIPNTKESFDAHFGATGLESDQATLKSALECCML---YYAPSSSDPEYPS--------ISTENVEVKMTERQRQAQLD 458          
BLAST of mRNA_Ecto-sp13_S_contig7582.18781.1 vs. uniprot
Match: A0A6C0KF60_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KF60_9ZZZZ)

HSP 1 Score: 63.5 bits (153), Expect = 2.720e-7
Identity = 68/232 (29.31%), Postives = 104/232 (44.83%), Query Frame = 0
Query:  156 NTKGLLVAHGMGSGKTLTSLWVAKEYVTKNRVKFVNILAPNAAVGEFIDSFERAGITPRIAGKIRVLTHDEF-ALNKKAREF--SKSLVIVDEAHMFTGIKYDALAKAGV------------SFLMLLSGTPAPNTPSEIVPLINLLCRKKKDHWTRQKWDKSTTTLSEKK-RVLRD----KVSTYNIGPKYNYLRERETEFPSANNFPGFKVSTRNVKLSPSQNAAYMKLD 367
            N +GLLV HG+G+GKTLT++  ++ ++ +N    V ++ P +    FI   E  G   ++  +  + T   F A  KK  +     +L+I+DEAH       D   K GV              ++LL+ TP  N P EIV LI ++     D     + D     LS K  R+L+D    KVS Y    K     + + +FP + N   F V      +SP     Y K++
Sbjct:  177 NARGLLVIHGVGTGKTLTAVTASQCFLQQNPAHRVIVVTPTSLQQNFIKELETYGA--KLTKRYAMYTIQGFSAAIKKGTKIPCKNTLLILDEAHNIRSEVSDDCDKVGVYARNLIECAKDAKKVLLLTATPIINRPCEIVNLIGMI-----DGEEPIEADVLNKMLSNKDDRMLKDYIGCKVSVYTRDTK-----KHDPDFPDSTNNDVFLV------MSPKYAHEYKKIE 390          
BLAST of mRNA_Ecto-sp13_S_contig7582.18781.1 vs. uniprot
Match: A0A5J6VJP7_9VIRU (SNF2 family N-terminal domain protein n=1 Tax=Megaviridae environmental sample TaxID=1737588 RepID=A0A5J6VJP7_9VIRU)

HSP 1 Score: 63.2 bits (152), Expect = 3.070e-7
Identity = 42/142 (29.58%), Postives = 74/142 (52.11%), Query Frame = 0
Query:  154 YANTKGLLVAHGMGSGKTLTSLWVAKEYVTKNRVKFVNILAPNAAVGEFIDSFERAGITPRIAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTGIKYDALAKAGVSF--------LMLLSGTPAPNTPSEIVPLINLL 287
            +  T+GL++ HGMGSGKTLTS+  A++ +       +++  P   V  +     +A        K  +++HD++ +      +S  L+IVDEAH+   ++     K+ V F        ++LL+GTP  N PS+   L+N++
Sbjct:   15 FRKTRGLILNHGMGSGKTLTSIACAEDAMKNKPNLQIHVAVPAKLVSNYEKELAKANAN---TSKYIIMSHDKY-IKWIQPPYSNILLIVDEAHI---LRNATTEKSKVFFKVARYCYKVLLLTGTPLVNYPSDASHLLNMI 149          
BLAST of mRNA_Ecto-sp13_S_contig7582.18781.1 vs. uniprot
Match: A0A6C0F7I3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F7I3_9ZZZZ)

HSP 1 Score: 60.1 bits (144), Expect = 3.010e-6
Identity = 45/141 (31.91%), Postives = 71/141 (50.35%), Query Frame = 0
Query:  156 NTKGLLVAHGMGSGKTLTSLWVAKEYVTKNRVKFVNILAPNAAVGEFIDSFERAGITPRIAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTGIK-------YDALAKAGVSFLMLLSGTPAPNTPSEIVPLINLLCR 289
            ++KGLLV HG+GSGKTLTS+ +A      N  K V ++ P +    +     + G   +   K  +++ +  A  K   +    +++VDEAH              DA  KA    ++LL+GTP  N P++I  LIN++ R
Sbjct:   24 DSKGLLVFHGLGSGKTLTSIAMAH-----NSDKEVIVIVPASLKDNYKKEIAKFGANKK---KFTIMSFEMSAKTKL--QLKNKVLVVDEAHRLRNTNRKDTKNIIDASKKA--EKIILLTGTPFVNRPNDIASLINIIAR 152          
BLAST of mRNA_Ecto-sp13_S_contig7582.18781.1 vs. uniprot
Match: A0A0F9UZT8_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9UZT8_9ZZZZ)

HSP 1 Score: 58.5 bits (140), Expect = 9.600e-6
Identity = 47/132 (35.61%), Postives = 67/132 (50.76%), Query Frame = 0
Query:  158 KGLLVAHGMGSGKTLTSLWVAKEYVTKNRVKFVNILAPNAAVGEFIDSFERAGITPRIAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFTG---IKYDALAKAGVSFLMLLSGTPAPNTPSEIVPLINL 286
            +GL+VAHG+GSGKTLTSL V         V     L  N A        E+   T  I  +I+ L +    + +K R  SK ++I+DEAH        +Y  LA +     MLL+ +P  N PS++ PL+N+
Sbjct:   40 EGLVVAHGLGSGKTLTSLAVIDALKQPTDVVVPASLQDNYAK-------EQRKHTSGIKLEIQSLQN----IARKRRVPSKPVLIIDEAHRARNPDTAQYRTLAASPAKKRMLLTASPIYNHPSDLAPLVNI 160          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7582.18781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
Q8QNN8_ESV1K1.020e-20785.15EsV-1-23 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D8LP58_ECTSI1.530e-20182.49Helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A6H5JDR8_9PHAE1.760e-8570.35Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1Y1IQ76_KLENI6.950e-826.48Chromodomain helicase DNA binding protein 8 n=1 Ta... [more]
A0A6C0KF60_9ZZZZ2.720e-729.31Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A5J6VJP7_9VIRU3.070e-729.58SNF2 family N-terminal domain protein n=1 Tax=Mega... [more]
A0A6C0F7I3_9ZZZZ3.010e-631.91Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A0F9UZT8_9ZZZZ9.600e-635.61Uncharacterized protein n=1 Tax=marine sediment me... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59
NoneNo IPR availableGENE3D3.40.50.300coord: 125..286
e-value: 1.5E-11
score: 46.1
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 125..299
e-value: 9.0E-4
score: 28.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 151..290
score: 12.81
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 236..366
e-value: 4.5E-8
score: 32.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 154..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7582contigEcto-sp13_S_contig7582:2135..3250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7582.18781.1mRNA_Ecto-sp13_S_contig7582.18781.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7582 2135..3250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7582.18781.1 ID=prot_Ecto-sp13_S_contig7582.18781.1|Name=mRNA_Ecto-sp13_S_contig7582.18781.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=372bp
MATSQNYDNDLARAVAMAMKKSGITIAPVPAQKAKKNSAREAEAKKKKQA
RALLRLQEDLVQKRVGAEGVVCRSGRPRAKRVRYDPSTAKKRVSPSKSAP
KILDPTRSTVDDRVETARTRARGRKQESANKNQCNVIEFMKRVADPAKNK
EEKYANTKGLLVAHGMGSGKTLTSLWVAKEYVTKNRVKFVNILAPNAAVG
EFIDSFERAGITPRIAGKIRVLTHDEFALNKKAREFSKSLVIVDEAHMFT
GIKYDALAKAGVSFLMLLSGTPAPNTPSEIVPLINLLCRKKKDHWTRQKW
DKSTTTLSEKKRVLRDKVSTYNIGPKYNYLRERETEFPSANNFPGFKVST
RNVKLSPSQNAAYMKLDKTVKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR000330SNF2_N
IPR027417P-loop_NTPase