prot_Ecto-sp13_S_contig758.18780.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig758.18780.1
Unique Nameprot_Ecto-sp13_S_contig758.18780.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length205
Homology
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BLAST of mRNA_Ecto-sp13_S_contig758.18780.1 vs. uniprot
Match: D7FU71_ECTSI (GT23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU71_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 2.760e-92
Identity = 145/202 (71.78%), Postives = 169/202 (83.66%), Query Frame = 0 
Query:    1 MARLCVFESEEDLGKFLMTNYKETQRPKLPKQSPRAQLDDEIETAAALLGYVNSNMQPWFKEDTDSILLENDVVSVRSGRYVAIHVRRGDKL-IREASRTEVEVYLQAAASILRNSTEGVDGPNSIVGLWVASDDSSVLPEVKGLVSSYFPNVQDERVVSISFRTSAPSPHGHADELPTTSHLMVC-TKSRGDLASMVNVNN 200
            MARLCVF+S ED+GKFLM NY+E+QR  +P+ SPR QL DE ETAAALLGYV SNMQPWFKEDTD++LL++DV SVRS RYVAIHVRRGDK+ ++EASRTEVEVYLQAAASIL+NST  VDGPNSI GLWV+SDD SVLPEVK L S+YF NVQD+RVVSI+FR    +  G+ D+LPTTSH M    + RGD AS++NVNN
Sbjct:    1 MARLCVFDSNEDVGKFLMANYEESQRINVPQPSPRTQLHDETETAAALLGYVYSNMQPWFKEDTDAMLLQSDVHSVRSVRYVAIHVRRGDKVTLQEASRTEVEVYLQAAASILQNSTGSVDGPNSIGGLWVSSDDPSVLPEVKALASTYFANVQDDRVVSITFRAEGLAQDGNKDQLPTTSHRMASGLRGRGDSASLLNVNN 202
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BLAST of mRNA_Ecto-sp13_S_contig758.18780.1 vs. uniprot
Match: A0A6H5JIU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIU1_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 1.590e-45
Identity = 79/104 (75.96%), Postives = 93/104 (89.42%), Query Frame = 0 
Query:    1 MARLCVFESEEDLGKFLMTNYKETQRPKLPKQSPRAQLDDEIETAAALLGYVNSNMQPWFKEDTDSILLENDVVSVRSGRYVAIHVRRGDKL-IREASRTEVEV 103
            MARLCVF+S+EDLGKFLM NY+E+QR ++P++S R QL DE ETAAALLGYV SNMQPWFKEDT+ +LL++DV SVRS RYVAIHVRRGDKL ++EASRTEVEV
Sbjct:    1 MARLCVFDSDEDLGKFLMANYEESQRIEVPQRSSRTQLHDETETAAALLGYVYSNMQPWFKEDTERMLLQSDVDSVRSARYVAIHVRRGDKLTLKEASRTEVEV 104
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig758.18780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FU71_ECTSI2.760e-9271.78GT23 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JIU1_9PHAE1.590e-4575.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 14..179
e-value: 7.4E-10
score: 40.4
IPR027350Glycosyltransferase family 23 (GT23) domainPROSITEPS51659GT23coord: 1..204
score: 16.234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig758contigEcto-sp13_S_contig758:12498..14736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig758.18780.1mRNA_Ecto-sp13_S_contig758.18780.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig758 12498..14736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig758.18780.1 ID=prot_Ecto-sp13_S_contig758.18780.1|Name=mRNA_Ecto-sp13_S_contig758.18780.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=205bp
MARLCVFESEEDLGKFLMTNYKETQRPKLPKQSPRAQLDDEIETAAALLG
YVNSNMQPWFKEDTDSILLENDVVSVRSGRYVAIHVRRGDKLIREASRTE
VEVYLQAAASILRNSTEGVDGPNSIVGLWVASDDSSVLPEVKGLVSSYFP
NVQDERVVSISFRTSAPSPHGHADELPTTSHLMVCTKSRGDLASMVNVNN
RMLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027350GT23_dom