mRNA_Ecto-sp13_S_contig7578.18777.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7578.18777.1 vs. uniprot
Match: A0A6H5JSZ0_9PHAE (Cytochrome c domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSZ0_9PHAE) HSP 1 Score: 202 bits (514), Expect = 8.050e-66 Identity = 99/104 (95.19%), Postives = 101/104 (97.12%), Query Frame = 1
Query: 1 MSTKAGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRTAGTVDGYSYSTANKTSGVLWDESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATAP 312
MSTK GAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGR AGTVDGYSYSTANKTSGV+W ES+LFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATAP
Sbjct: 1 MSTKLGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRAAGTVDGYSYSTANKTSGVVWTESTLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATAP 104
BLAST of mRNA_Ecto-sp13_S_contig7578.18777.1 vs. uniprot
Match: A0A7S2SEC8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEC8_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.020e-52 Identity = 81/103 (78.64%), Postives = 89/103 (86.41%), Query Frame = 1
Query: 1 MSTKAGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRTAGTVDGYSYSTANKTSGVLWDESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 309
MST GAKIFKTKCSQCHTVE HKQGPNLNGLFGR +G GY+YS ANK SG++W + +LFDYLLAPKKYIKGTKMVFAGIKKPAERK+LIAYLKE+TA
Sbjct: 12 MSTAKGAKIFKTKCSQCHTVEAGGAHKQGPNLNGLFGRQSGLAAGYTYSDANKNSGIIWGDDTLFDYLLAPKKYIKGTKMVFAGIKKPAERKDLIAYLKESTA 114
BLAST of mRNA_Ecto-sp13_S_contig7578.18777.1 vs. uniprot
Match: A0A835YXF9_9STRA (Cytochrome c n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXF9_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.030e-52 Identity = 80/103 (77.67%), Postives = 92/103 (89.32%), Query Frame = 1
Query: 1 MSTKAGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRTAGTVDGYSYSTANKTSGVLWDESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 309
MS + GAKIFKTKCSQCH VEK AGH+QGPNL+GLFGRTAGT +GYSYSTANK+SGV+W + +LF+YLL PKKYIKGTKMVFAGIKK ER++LIAYLK AT+
Sbjct: 1 MSAEKGAKIFKTKCSQCHVVEKGAGHRQGPNLHGLFGRTAGTTEGYSYSTANKSSGVVWGDDTLFEYLLNPKKYIKGTKMVFAGIKKADERQDLIAYLKSATS 103
BLAST of mRNA_Ecto-sp13_S_contig7578.18777.1 vs. uniprot
Match: A0A7S2G6U3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6U3_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.980e-50 Identity = 79/103 (76.70%), Postives = 85/103 (82.52%), Query Frame = 1
Query: 1 MSTKAGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRTAGTVDGYSYSTANKTSGVLWDESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 309
MS GAKIFKTKCSQCHTVE HKQGPNLNG+FGR +G GY +S ANK SGV W E +LFDYLLAPKKYIKGTKMVFAG+KKPAERK+LIAYLK ATA
Sbjct: 1 MSETKGAKIFKTKCSQCHTVEAGGAHKQGPNLNGIFGRQSGQATGYDFSKANKDSGVTWGEDTLFDYLLAPKKYIKGTKMVFAGLKKPAERKDLIAYLKSATA 103
BLAST of mRNA_Ecto-sp13_S_contig7578.18777.1 vs. uniprot
Match: A0A6V7QVU6_ANACO (Cytochrome c domain-containing protein n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7QVU6_ANACO) HSP 1 Score: 163 bits (412), Expect = 4.360e-50 Identity = 76/102 (74.51%), Postives = 87/102 (85.29%), Query Frame = 1
Query: 7 TKAGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRTAGTVDGYSYSTANKTSGVLWDESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATAP 312
+K G KIFKTKC+QCHTVEK AGHKQGPNLNGLFGR +GT GYSYSTANK V+W+E++L++YLL PKKYI GTKMVF G+KKP ER +LIAYLKEAT P
Sbjct: 16 SKGGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSTANKNMAVIWEENTLYEYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATKP 117
BLAST of mRNA_Ecto-sp13_S_contig7578.18777.1 vs. uniprot
Match: A0A4D9D2B8_9STRA (Cytochrome c domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2B8_9STRA) HSP 1 Score: 162 bits (409), Expect = 8.070e-50 Identity = 76/103 (73.79%), Postives = 87/103 (84.47%), Query Frame = 1
Query: 1 MSTKAGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRTAGTVDGYSYSTANKTSGVLWDESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 309
MS + GAKIFKTKCSQCHTVEK HKQGPNLNGLFGR +G + YSYSTANK SG++W E +LF+YLLAPK YIKGTKMVFAGIK +RK+LIAYLK++TA
Sbjct: 1 MSAEKGAKIFKTKCSQCHTVEKGGAHKQGPNLNGLFGRQSGQAENYSYSTANKNSGIIWGEDTLFEYLLAPKNYIKGTKMVFAGIKSAKDRKDLIAYLKDSTA 103
BLAST of mRNA_Ecto-sp13_S_contig7578.18777.1 vs. uniprot
Match: CYC_ORYSI (Cytochrome c n=62 Tax=Mesangiospermae TaxID=1437183 RepID=CYC_ORYSI) HSP 1 Score: 161 bits (408), Expect = 1.520e-49 Identity = 75/100 (75.00%), Postives = 87/100 (87.00%), Query Frame = 1
Query: 10 KAGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRTAGTVDGYSYSTANKTSGVLWDESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 309
KAG KIFKTKC+QCHTV+K AGHKQGPNLNGLFGR +GT GYSYSTANK V+W+E++L+DYLL PKKYI GTKMVF G+KKP ER +LI+YLKEAT+
Sbjct: 13 KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSTANKNMAVIWEENTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLISYLKEATS 112
BLAST of mRNA_Ecto-sp13_S_contig7578.18777.1 vs. uniprot
Match: A0A7I8KG52_SPIIN (Hypothetical protein n=6 Tax=Magnoliopsida TaxID=3398 RepID=A0A7I8KG52_SPIIN) HSP 1 Score: 161 bits (408), Expect = 1.520e-49 Identity = 75/99 (75.76%), Postives = 86/99 (86.87%), Query Frame = 1
Query: 13 AGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRTAGTVDGYSYSTANKTSGVLWDESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 309
AG KIFKTKC+QCHTV+K AGHKQGPNLNGLFGR +GT GYSYSTANK V+W+ES+L+DYLL PKKYI GTKMVF G+KKP ER +LIAYLK+AT+
Sbjct: 14 AGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTSGYSYSTANKNMAVIWEESTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKQATS 112
BLAST of mRNA_Ecto-sp13_S_contig7578.18777.1 vs. uniprot
Match: F0Y1I7_AURAN (Cytochrome c domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1I7_AURAN) HSP 1 Score: 161 bits (407), Expect = 1.580e-49 Identity = 80/103 (77.67%), Postives = 86/103 (83.50%), Query Frame = 1
Query: 1 MSTKAGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRTAGTVDGYSYSTANKTSGVLWDESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 309
MS K GAKIFKTKCSQCHTVE HKQGPNLNGLFGR +G GYSYS ANK SGV+W + +LFDYLLAPKKYIKGTKMVFAGIKKP ER ELIAY++EA A
Sbjct: 1 MSAK-GAKIFKTKCSQCHTVEAGGAHKQGPNLNGLFGRQSGQAGGYSYSQANKDSGVIWSKETLFDYLLAPKKYIKGTKMVFAGIKKPKERNELIAYMEEACA 102
BLAST of mRNA_Ecto-sp13_S_contig7578.18777.1 vs. uniprot
Match: A0A022R107_ERYGU (Cytochrome c domain-containing protein n=17 Tax=Mesangiospermae TaxID=1437183 RepID=A0A022R107_ERYGU) HSP 1 Score: 161 bits (407), Expect = 2.150e-49 Identity = 77/100 (77.00%), Postives = 86/100 (86.00%), Query Frame = 1
Query: 10 KAGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRTAGTVDGYSYSTANKTSGVLWDESSLFDYLLAPKKYIKGTKMVFAGIKKPAERKELIAYLKEATA 309
KAG KIFKTKC+QCHTV+K AGHKQGPNLNGLFGR +GT GYSYSTANK+ V W E++L+DYLL PKKYI GTKMVF G+KKP ER +LIAYLKEATA
Sbjct: 13 KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSTANKSMAVNWGENTLYDYLLNPKKYIPGTKMVFPGLKKPKERADLIAYLKEATA 112 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7578.18777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7578.18777.1 >prot_Ecto-sp13_S_contig7578.18777.1 ID=prot_Ecto-sp13_S_contig7578.18777.1|Name=mRNA_Ecto-sp13_S_contig7578.18777.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp MSTKAGAKIFKTKCSQCHTVEKDAGHKQGPNLNGLFGRTAGTVDGYSYSTback to top mRNA from alignment at Ecto-sp13_S_contig7578:1495..2526+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7578.18777.1 ID=mRNA_Ecto-sp13_S_contig7578.18777.1|Name=mRNA_Ecto-sp13_S_contig7578.18777.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1032bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7578:1495..2526+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7578:1495..2526+ >mRNA_Ecto-sp13_S_contig7578.18777.1 ID=mRNA_Ecto-sp13_S_contig7578.18777.1|Name=mRNA_Ecto-sp13_S_contig7578.18777.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=315bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7578:1495..2526+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |