prot_Ecto-sp13_S_contig7573.18774.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7573.18774.1
Unique Nameprot_Ecto-sp13_S_contig7573.18774.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp13_S_contig7573.18774.1 vs. uniprot
Match: D7FNK8_ECTSI (PRORP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNK8_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 2.430e-19
Identity = 44/56 (78.57%), Postives = 45/56 (80.36%), Query Frame = 0
Query:    1 MRDHHFSMLSHRSFQRWKERHQV---------QGGDDDEREVITEEPRSYSKRTQK 47
            MRDHHFSMLSHRSFQRWKERHQ          +GGDDD REVITEEPRSYSKRTQK
Sbjct:   34 MRDHHFSMLSHRSFQRWKERHQARFYFGDWKGEGGDDDAREVITEEPRSYSKRTQK 89          
BLAST of mRNA_Ecto-sp13_S_contig7573.18774.1 vs. uniprot
Match: A0A6H5LB75_9PHAE (Ribonuclease P n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB75_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 4.020e-18
Identity = 45/56 (80.36%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    1 MRDHHFSMLSHRSFQRWKERHQV---------QGGDDDEREVITEEPRSYSKRTQK 47
            MRDHHFSMLSHRSFQRWKERHQ          +GGDDDEREVITEEPRSYSKRTQK
Sbjct:  759 MRDHHFSMLSHRSFQRWKERHQARFYFGDWKGEGGDDDEREVITEEPRSYSKRTQK 814          
BLAST of mRNA_Ecto-sp13_S_contig7573.18774.1 vs. uniprot
Match: A0A835YSR3_9STRA (Ribonuclease P n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR3_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.080e-11
Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 MRDHHFSMLSHRSFQRWKERHQVQG--GD--DDEREVITEEPRSYSKRTQK 47
            MRDHHF MLSHRSFQRWKERHQV    GD  D  R+V+  EPR YSKR Q+
Sbjct:   29 MRDHHFLMLSHRSFQRWKERHQVHFCFGDWRDGRRQVLVREPRKYSKRIQR 79          
BLAST of mRNA_Ecto-sp13_S_contig7573.18774.1 vs. uniprot
Match: A0A7S2SKI7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKI7_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.090e-7
Identity = 33/52 (63.46%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 MRDHHFSMLSHRSFQRWKERHQVQ---GGDDDE---REVITEEPRSYSKRTQ 46
            MRDHHF MLSHRSFQRWKERHQ+    GG D     R VIT  P +YS R Q
Sbjct:  232 MRDHHFRMLSHRSFQRWKERHQIHYEFGGFDSSLRGRRVITHVPPTYSIRMQ 283          
BLAST of mRNA_Ecto-sp13_S_contig7573.18774.1 vs. uniprot
Match: A0A7S2SLT1_9STRA (Protein unc-45 homolog B n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLT1_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.120e-7
Identity = 33/52 (63.46%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    1 MRDHHFSMLSHRSFQRWKERHQVQ---GGDDDE---REVITEEPRSYSKRTQ 46
            MRDHHF MLSHRSFQRWKERHQ+    GG D     R VIT  P +YS R Q
Sbjct: 1907 MRDHHFRMLSHRSFQRWKERHQIHYEFGGFDSSLRGRRVITHVPPTYSIRMQ 1958          
BLAST of mRNA_Ecto-sp13_S_contig7573.18774.1 vs. uniprot
Match: A0A7S2BW17_9STRA (Ribonuclease P n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BW17_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.080e-7
Identity = 31/51 (60.78%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    1 MRDHHFSMLSHRSFQRWKERHQV-----QGGDDDEREVITEEPRSYSKRTQ 46
            MRDHHF MLSHR FQRWKERHQV     + G    REV+T  P +YS R Q
Sbjct:  516 MRDHHFQMLSHRDFQRWKERHQVHFEFSREGIRGHREVVTYAPPAYSVRMQ 566          
BLAST of mRNA_Ecto-sp13_S_contig7573.18774.1 vs. uniprot
Match: A0A7S2L070_9STRA (Ribonuclease P n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L070_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 6.530e-6
Identity = 28/55 (50.91%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    1 MRDHHFSMLSHRSFQRWKERHQVQ--------GGDDDEREVITEEPRSYSKRTQK 47
            MRDHHF ML+HRSF RWKERHQ++         GD   R +    PR YS+R Q+
Sbjct:  389 MRDHHFQMLAHRSFLRWKERHQIRFHFGSWISTGDTRHRAIELSFPRVYSRRIQR 443          
BLAST of mRNA_Ecto-sp13_S_contig7573.18774.1 vs. uniprot
Match: B8CF13_THAPS (Ribonuclease P n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CF13_THAPS)

HSP 1 Score: 49.7 bits (117), Expect = 1.230e-5
Identity = 28/53 (52.83%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    1 MRDHHFSMLSHRSFQRWKERHQVQ------GGDDDEREVITEEPRSYSKRTQK 47
            MRDHHF ML+H SF RWKERHQV+            R+V+ E P SYS+R Q+
Sbjct:  750 MRDHHFQMLAHGSFLRWKERHQVRFDFGHWNNRIGRRDVLLEYPSSYSRRIQR 802          
BLAST of mRNA_Ecto-sp13_S_contig7573.18774.1 vs. uniprot
Match: A0A7S3YD57_HETAK (Ribonuclease P n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD57_HETAK)

HSP 1 Score: 48.1 bits (113), Expect = 1.580e-5
Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    1 MRDHHFSMLSHRSFQRWKERHQVQ----GGDDDEREVITEEPRSYSKRTQK 47
            MRDHHF+MLSHRSF RW+ERH+       G+  +R V   +P  YS+R QK
Sbjct:   60 MRDHHFAMLSHRSFLRWRERHKTSFKFGHGEPYKRSVTLMKPPVYSQRMQK 110          
BLAST of mRNA_Ecto-sp13_S_contig7573.18774.1 vs. uniprot
Match: A0A7R9U0X3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U0X3_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 2.050e-5
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 0
Query:    1 MRDHHFSMLSHRSFQRWKERHQV 23
            MRDHHF MLSHRSFQRW+ERHQV
Sbjct:  186 MRDHHFEMLSHRSFQRWRERHQV 208          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7573.18774.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FNK8_ECTSI2.430e-1978.57PRORP domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5LB75_9PHAE4.020e-1880.36Ribonuclease P n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
A0A835YSR3_9STRA2.080e-1168.63Ribonuclease P n=1 Tax=Tribonema minus TaxID=30337... [more]
A0A7S2SKI7_9STRA1.090e-763.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SLT1_9STRA1.120e-763.46Protein unc-45 homolog B n=1 Tax=Rhizochromulina m... [more]
A0A7S2BW17_9STRA2.080e-760.78Ribonuclease P n=1 Tax=Dictyocha speculum TaxID=35... [more]
A0A7S2L070_9STRA6.530e-650.91Ribonuclease P n=1 Tax=Leptocylindrus danicus TaxI... [more]
B8CF13_THAPS1.230e-552.83Ribonuclease P n=1 Tax=Thalassiosira pseudonana Ta... [more]
A0A7S3YD57_HETAK1.580e-552.94Ribonuclease P n=1 Tax=Heterosigma akashiwo TaxID=... [more]
A0A7R9U0X3_9STRA2.050e-591.30Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11980coord: 1..37
e-value: 8.2E-11
score: 42.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7573contigEcto-sp13_S_contig7573:1..1019 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7573.18774.1mRNA_Ecto-sp13_S_contig7573.18774.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7573 1..1607 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7573.18774.1 ID=prot_Ecto-sp13_S_contig7573.18774.1|Name=mRNA_Ecto-sp13_S_contig7573.18774.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
MRDHHFSMLSHRSFQRWKERHQVQGGDDDEREVITEEPRSYSKRTQK
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