mRNA_Ecto-sp13_S_contig7570.18770.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7570.18770.1
Unique NamemRNA_Ecto-sp13_S_contig7570.18770.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A6H5KHX0_9PHAE (FAPb protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX0_9PHAE)

HSP 1 Score: 512 bits (1319), Expect = 7.920e-174
Identity = 335/358 (93.58%), Postives = 339/358 (94.69%), Query Frame = 1
Query:    1 MPSREVGNLAVAAAFALFSAFLFFGRDEAGAWRENFLYLPIGGSTAPIASNSEPYVPAVHLAGVTGDGNSKEPPVASEPXXXXXXXXXXXXXXXESXXXXXXXX-AEAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAKTPLSPDVRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGVPPFLAS 1071
            MPSREVGNLAVAAAFALFSAFLFF RDEAGAWRENFL LPIGGSTAPIASNS+PYVPAVHLAGVTGDGNSK PPVASE XXXXXXXXXXXXXXX  XXXXXXXX AEAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           GLAKTPLSPDVRDPATGLVLPRTKQFASSKTGL+CLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGS++DE LPASVFSLFLGSDPVSPVAKTAFAEGVPPFLAS
Sbjct:    1 MPSREVGNLAVAAAFALFSAFLFFARDEAGAWRENFLNLPIGGSTAPIASNSDPYVPAVHLAGVTGDGNSKGPPVASESXXXXXXXXXXXXXXXXXXXXXXXXXXAEAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------GLAKTPLSPDVRDPATGLVLPRTKQFASSKTGLVCLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSIIDEALPASVFSLFLGSDPVSPVAKTAFAEGVPPFLAS 347          
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: D7G2G9_ECTSI (Similar to Chalcone Isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G9_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 1.420e-127
Identity = 200/207 (96.62%), Postives = 205/207 (99.03%), Query Frame = 1
Query:  451 GLAKTPLSPDVRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGVPPFLAS 1071
            GLAKTPLSPDVRDPATGLVLPRTKQFASSKTGL+CLGVGVRVKSVAFV VNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSI+REESVTLGWEGKDRLVVLVRDKEIGSV+DE+LPASVF+LFLGSDPVSPVAKTAFAEGVP FLAS
Sbjct:   23 GLAKTPLSPDVRDPATGLVLPRTKQFASSKTGLVCLGVGVRVKSVAFVNVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSINREESVTLGWEGKDRLVVLVRDKEIGSVIDESLPASVFNLFLGSDPVSPVAKTAFAEGVPAFLAS 229          
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A835ZC45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC45_9STRA)

HSP 1 Score: 157 bits (398), Expect = 2.650e-37
Identity = 95/215 (44.19%), Postives = 122/215 (56.74%), Query Frame = 1
Query:  457 AKTPLSPD-VRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFT-AVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFS--------------LFLGSDPVSPVAKTAFAEGV 1053
            A+T   PD + +P TG+ L  T  F  S   L C+G G RVKSVA  +V VY + LYVEP GA +AL  Y G  P E ++D   Y  L     F  YL + FAR+VG  KVV+A T AV+GV  DVL  F+ +    +G S+ + + V +GWEG+ RL V+VR   +G V D  LP ++F               L+LGSDPVSP AK AFA GV
Sbjct:  314 ARTSTMPDTIVEPVTGIALAATASFGGSAQ-LRCVGAGARVKSVALASVKVYALALYVEPGGAARALARYEGVAPAERARDVGFYEELMKPAAFPSYLVMSFARNVGTPKVVEALTSAVQGVAPDVLKNFAGMLGAAMGPSMRKGDVVAMGWEGEGRLAVVVRGVRVGEVADAVLPGAIFKVNFDTSTVHFLAVRLYLGSDPVSPPAKAAFASGV 527          
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A0G4GUV1_VITBC (Chalcone_isomerase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GUV1_VITBC)

HSP 1 Score: 147 bits (372), Expect = 6.430e-37
Identity = 86/196 (43.88%), Postives = 116/196 (59.18%), Query Frame = 1
Query:  466 PLSPDVRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGV 1053
            P++  ++D  TG+  P    F  +   +  LG G R K++    VNVY+VGLYVEPK A KAL S+ G   E L  D   Y  L G  +  K + L FAR+VGA KV DA +AVKGV  +V+ +F SL  +G+G SI + E++ +GW    RL VL+R +  G+VVD  LP + F L+LG  PVS  AK AF + V
Sbjct:    4 PVAAVLKDKVTGIEFPCEATFPGTPK-MTLLGAGPRRKNLGIAKVNVYSVGLYVEPKEAAKALSSFKGESEESLMNDDRFYDTLLGK-EVPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAFVKRV 197          
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A0G4GWT2_9ALVE (Chalcone_isomerase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GWT2_9ALVE)

HSP 1 Score: 146 bits (369), Expect = 3.000e-36
Identity = 91/201 (45.27%), Postives = 120/201 (59.70%), Query Frame = 1
Query:  454 LAKTPLSPDVRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAF-VTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGV 1053
            LA  PL+  + D ATGL       F SS   +  LG GVR K++   + VNVY+VGLYVEP  AR+ L  +   +  EL+K +  Y+ L    D  K +HL FARSVGA K+V+A T++ GV ++ L KFS L ++ +G SI  +E+VTL     D L V+VR K  GSV D  LP + F L+LG +PVS  AK AFA  V
Sbjct:   27 LAGFPLAAILTDAATGLDFETDVSFPSSPK-MTLLGAGVRAKALLGPIAVNVYSVGLYVEPSKARQTLSGFKTIEEAELAKKEDFYKALMKE-DLPKAMHLKFARSVGASKIVEALTSLNGVPEESLSKFSKLLLDSIGSSIGYKETVTLSSSKPDTLDVIVRGKHAGSVRDSKLPKAFFDLYLGKNPVSSEAKKAFASRV 225          
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A835Z7E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E7_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.040e-34
Identity = 87/202 (43.07%), Postives = 122/202 (60.40%), Query Frame = 1
Query:  454 LAKTPLSPDVRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVA-FVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDRE-ESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGV 1053
            +A  P   D+ +PATG+VL  T  F  S   L C+G+GVR   V  F +V+VY +GLY++  GARKALK++     E+L++    Y  L   G F++Y+ L F R V   KV DA TAV+GV   ++D +  L    +G+   R  +++ LG+EGKDRLVV+   K  G+V    LPA+VF L+LG DP+ P AK A A+GV
Sbjct:  145 VATPPRKTDLVEPATGIVLWPTDSFNGSPP-LTCVGLGVRTVPVLYFSSVHVYVMGLYIDAVGARKALKAFLPLPAEDLAQKPEFYSALLKPGVFTRYIVLAFNRKVSTLKVADALTAVEGVPPPIVDAYRRLLEGALGEKGARPGDTLALGFEGKDRLVVVANGKTHGAVRSTVLPAAVFKLYLGDDPIIPAAKRAVADGV 345          
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A7S2UYK7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYK7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 4.850e-33
Identity = 77/173 (44.51%), Postives = 108/173 (62.43%), Query Frame = 1
Query:  481 VRDPATGLVLPRTKQFASSKTG--LICLGVGVRVKS-VAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVF 990
            V +P TG+  P TK F+ + T   L   GVGVRVK+ V  + VNVY +GLYV+P  A +A   Y G+D +E++KD   +++L   G F+K +++ +AR+VG  KVVDA   V   +   LD F  L + G G +I   E++TLGWEGKD+LVV VRDK +G+V    L  +VF
Sbjct:   31 VTEPVTGIDFPVTKSFSLNSTSPTLTLTGVGVRVKALVGPLKVNVYGMGLYVDPSRAARAFSKYKGKDAKEVAKDDDFFKILHSPG-FAKAIYIDYARAVGVDKVVDALRLVPTEDTAALDYFCDLLVIGTGSTIGNRETMTLGWEGKDKLVVQVRDKTVGTVTSAKLVEAVF 202          
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A7S1JL13_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JL13_9ALVE)

HSP 1 Score: 119 bits (298), Expect = 1.290e-27
Identity = 67/143 (46.85%), Postives = 87/143 (60.84%), Query Frame = 1
Query:  625 VEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGV 1053
            VEPK A KAL S+ G   E L  D   Y  L G  +  K + L FAR+VGA KV DA +AVKGV  +V+ +F SL  +G+G SI + E++ +GW    RL VL+R +  G+VVD  LP + F L+LG  PVS  AK AF + V
Sbjct:    1 VEPKEASKALSSFKGESEESLMNDDRFYDTLLGK-EVPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAFVKRV 142          
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A835ZLC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLC9_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.180e-26
Identity = 100/312 (32.05%), Postives = 123/312 (39.42%), Query Frame = 1
Query:  481 VRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAFVTVNVYTVGL----YVEPKGARKALKSYAGRDPEELSKDKSVYRVL---------------------------------------------------------------------------------------------GGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFS------------------------LFLGSDPVSPVAKTAFAEGV 1053
            V +PATG+ L  T  F  S   L C+G GVR KS+A V+VNVY +GL    YVE + A KAL  YAG  P E +KD   Y  L                                                                                                  + +YL L FAR V A KV DA TAV+GV  DVL  F+ L    +G ++   +++ LGWEGKDRLVV+VR K+ G V D  LP ++F                         L+LGSDPVSP AK AFA GV
Sbjct:  116 VVEPATGISLRATDTFGGSAP-LRCVGAGVRAKSLAVVSVNVYALGLCVALYVETRAAAKALAKYAGVAPAERAKDAGFYEELMKPHPYLMPNPNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKRAXXXXXXXXXTKVSVLVSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTAAYPRYLLLSFARDVSAAKVTDALTAVQGVAPDVLKAFAHLLGSAIGGAVHAGDTIALGWEGKDRLVVVVRGKKAGEVKDAALPGAIFKRSVMPISDARPFCRCALLPPLRAQLYLGSDPVSPPAKAAFASGV 426          
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Match: A0A7S2S0W0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0W0_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 7.530e-17
Identity = 69/203 (33.99%), Postives = 101/203 (49.75%), Query Frame = 1
Query:  475 PDVRDPATGLVLPRTKQF--ASSKTGLIC-LGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKY----LHLVFARSVGAQKVVDAFTAVKGVNQD--VLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEGVP 1056
            P + +  TG+ LP    F  A  K  L+C LG G R+K +  + V VY +GLYVE  GA KAL        E    D S   +     D  K+    + L FAR V +++V DA       + D  +L+KF +    G+GKS+D+ ES+   W   + LV+ VR K  G +    LP  +F  FLG +   P  +++ A+G+P
Sbjct:   78 PPLEEATTGITLPGQLDFPGADGKPLLMCGLGCGPRLKKIGPLNVKVYAIGLYVEA-GAAKAL--------EPFKSDSSSPALFEALFDQEKFFVRKVLLTFARGVSSKQVTDAIAENLKAHLDEKILEKFGTTLASGIGKSLDKGESIFFAWTAPESLVIGVRGKATGELSHPKLPYILFRGFLGPNTPIPPLRSSTAQGLP 271          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7570.18770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5KHX0_9PHAE7.920e-17493.58FAPb protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G2G9_ECTSI1.420e-12796.62Similar to Chalcone Isomerase n=1 Tax=Ectocarpus s... [more]
A0A835ZC45_9STRA2.650e-3744.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4GUV1_VITBC6.430e-3743.88Chalcone_isomerase domain-containing protein n=2 T... [more]
A0A0G4GWT2_9ALVE3.000e-3645.27Chalcone_isomerase domain-containing protein n=1 T... [more]
A0A835Z7E7_9STRA2.040e-3443.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UYK7_9STRA4.850e-3344.51Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1JL13_9ALVE1.290e-2746.85Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
A0A835ZLC9_9STRA1.180e-2632.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2S0W0_9STRA7.530e-1733.99Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7570contigEcto-sp13_S_contig7570:1751..5269 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeViridiplantae
Stop1
Start1
Seed ortholog score94.7
Seed ortholog evalue9.1e-17
Seed eggNOG ortholog296587.XP_002503292.1
Model size2371
Hectar predicted targeting categorysignal peptide
Exons3
EggNOG free text desc.Chalcone isomerase-like
EggNOG OGs2E0MF@1,2S81H@2759,34IMC@3041,37WXY@33090
Ec32 ortholog descriptionChalcone Isomerase-like
Ec32 orthologEc-00_005930.1
Cds size1074
COG Functional cat.S
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464026.360103-CDS-Ecto-sp13_S_contig7570:1750..23651681464026.360103-CDS-Ecto-sp13_S_contig7570:1750..2365Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7570 1751..2365 +
1681464026.3721383-CDS-Ecto-sp13_S_contig7570:2678..28991681464026.3721383-CDS-Ecto-sp13_S_contig7570:2678..2899Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7570 2679..2899 +
1681464026.3821583-CDS-Ecto-sp13_S_contig7570:3734..39721681464026.3821583-CDS-Ecto-sp13_S_contig7570:3734..3972Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7570 3735..3972 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464026.3960972-UTR-Ecto-sp13_S_contig7570:3972..52691681464026.3960972-UTR-Ecto-sp13_S_contig7570:3972..5269Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7570 3973..5269 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7570.18770.1prot_Ecto-sp13_S_contig7570.18770.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7570 1751..3972 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7570.18770.1

>prot_Ecto-sp13_S_contig7570.18770.1 ID=prot_Ecto-sp13_S_contig7570.18770.1|Name=mRNA_Ecto-sp13_S_contig7570.18770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=358bp
MPSREVGNLAVAAAFALFSAFLFFGRDEAGAWRENFLYLPIGGSTAPIAS
NSEPYVPAVHLAGVTGDGNSKEPPVASEPDDAAAAAAAAAAAAAESAAAA
AAAAAEAKAAKAAEAKAAKAAVAAEAEAATAAAAAAAAAKATEPAKAKAA
GLAKTPLSPDVRDPATGLVLPRTKQFASSKTGLICLGVGVRVKSVAFVTV
NVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLH
LVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTL
GWEGKDRLVVLVRDKEIGSVVDETLPASVFSLFLGSDPVSPVAKTAFAEG
VPPFLAS*
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mRNA from alignment at Ecto-sp13_S_contig7570:1751..5269+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7570.18770.1 ID=mRNA_Ecto-sp13_S_contig7570.18770.1|Name=mRNA_Ecto-sp13_S_contig7570.18770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3519bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7570:1751..5269+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCTTCGCGGGAGGTAGGAAACCTGGCGGTCGCCGCGGCGTTCGCCCT CTTCTCCGCCTTCCTCTTCTTCGGCCGCGACGAGGCCGGCGCTTGGCGAG AGAACTTCCTCTACCTCCCCATCGGCGGTTCCACCGCCCCTATCGCCTCC AATTCCGAGCCCTATGTCCCGGCCGTACACCTGGCCGGCGTAACCGGGGA CGGCAACAGCAAAGAGCCTCCGGTGGCGTCGGAACCAGATGATGCAGCGG CGGCAGCGGCAGCGGCGGCGGCAGCGGCGGCAGAATCAGCGGCGGCGGCG GCGGCGGCAGCAGCTGAAGCAAAGGCAGCAAAGGCAGCGGAGGCAAAGGC GGCAAAGGCAGCAGTGGCAGCGGAGGCGGAGGCAGCAACAGCGGCGGCGG CGGCAGCAGCCGCAGCGAAGGCAACGGAACCAGCTAAGGCAAAGGCAGCA GGCCTCGCCAAGACGCCACTGTCGCCGGACGTTCGGGACCCCGCGACGGG CTTGGTGTTGCCGAGAACAAAGCAGTTCGCGTCCTCGAAGACGGGGCTCA TCTGCCTCGGGGTGGGCGTGAGGGTCAAGTCGGTCGCCTTCGTGACTGTC AACGTCTACACGGTGGTGAGTACTGTACGGCTCCGTTCCTGATGGGTCAG TCGGTTGGTTGGTCGGTTGGTTGTCCTCTTCCGTCTGTGGCTTGCCCTAT GTCTCGACAGCTCGACGAGCGGTGTTCGCTAGACGGAAGTTGTTACGGGT GCAGGTCTTGCTGTACTCGTGTACCGCCTTGCCCACATTCCGCGCCATGT GGCAAGCACAGAGCATCATCGGAACGGACGACGCCGCCTCGTTCACACCG TCCTGAGTATGTTTACCATTCCACGTCCGTTGCCGTAACTTCGTCGCTTT GCGCACCCCCTGCGTGCCGCGCGTGTAGGGGCTGTACGTCGAGCCGAAGG GTGCGCGAAAAGCGCTCAAGAGTTACGCCGGCAGGGACCCCGAAGAGTTG AGCAAGGACAAATCGGTCTACCGCGTGCTGGGTGGGGCGGGCGACTTCTC CAAGTACCTGCACCTCGTGTTCGCGCGGAGCGTCGGAGCGCAGAAAGTTG TTGACGCGTTCACCGCCGTCAAGGGCGTGAACCAGGACGTTCTCGACAAG TGCGTGTCGGGGATCGGGGGGTAAACCTTTATATCATGGCACACCGTTTT CGTTCGGCCACGGACCTCGCATCCCTAGTACGAAGCACGTCCAGCAGGTT TCTTGTGCGAACCAACTCCTACATGGGAGGGGGGCAGGGAGGCTGCGTTG TAGCTTCATTTACCTCTCTGAGCGCATCGAGCACGTATCTGTCTGTCTGT CTCACAAGGGACGACGGGAGCAACCCTCGCATGTCATATCGCATTTATTC TTCTTGTGGTTGTTACTTGTGTTCGAATTCACACAACGCTCCGACACCTG CCCGGGGCCTTCTGACAGCCGTACCGTCCCGGAATGCCTTCCTCGGTGAA GGGTGATAGTAGAGATAATGAGCTTTGTGGGTGGTAGGTCTTGTTACCCC CGGATTGGTCGTGGTTGTTGTGTCCTCTCTTGCCGCTACTTGCTTGTATC GAAAGGCGTTCCACCGTTTTCGTCGACCACTCACTGACCCTCCCGCGCGA CGTTGTCTCTCTTTCGTCTGCCGTGGTACGCAGAGCGCTTGGCCCAATAA AAAGTGCAACGCAGCGTATGCACTCATTCGCCGTTAGTTTCACGAAGTGT GTGCCTCCGCACCAACAGCAACAACAACGCCTGTTTAGAATGACCGACCG GCATGACCCAAGCTAAACAGAAAAAAAGTTGCCCAAAATATCTTTTTACG TGTTCCTCCGCATGCTTCCACACCTGGATACTCCGCGATAACGTTTCCGT TCCCAAAACAGCGGGACACAGATTTGTGAGCTTAAACCTGTGTGTTACGT TTTGTTTTACCGTAAAATACGTCGGATCGCCCAGGTTTTCAAGCCTGACG ATGGAGGGCGTAGGGAAGTCCATCGACAGGGAAGAGTCGGTCACACTGGG GTGGGAGGGTAAGGACAGGCTGGTGGTCTTGGTTCGCGACAAGGAGATCG GCAGCGTCGTCGACGAGACCCTCCCTGCGTCGGTGTTCAGCCTTTTCTTG GGGTCCGACCCGGTCTCGCCGGTGGCGAAGACCGCGTTCGCGGAAGGCGT GCCCCCGTTCCTGGCAAGCTAACTTTGTTTCGAGGGGGGGGTATCCCCGC CTACGGGGACCCTTTTGTCTCTGGAAGGCGTTGTTGTTTGCCCAACACGA TAGATGCAACATCGAAAAGCAACCACGATGCGTGAACAAGCTTGAGATTG ACAGCAGTGTTTGTTTTTGGTGCCCTTCCTTTTTGTTATTTTCGGTACGA GTTCCACCAACTGGGGGAAGGCGTTGTTTGGGTTTTCAAAATTTGCGCTC TAACCAGCGCGTGTCAGGTCGTTGGCCTCCTGGTTAAAGGATCCCCAGGC GTGTTTTCGAGGAGCCTAGTCTCTCCCGACGACCTTGCGCCACCTGATGA TGTATTGATGGGAAGGTTATGGTTCCGAGACTCTTGTTTCTATTGGTTTT GGGGGAGTGGAGGCGCATGCGGTATACCTTTCTGGGTCAGAACGTTGGCG GCGAAATCTATCCTCGCTTGCCATGCCGCGTATGTGCGCGTGTTGTGTTC TCTTTGGACATCAGCGGCAGTTTTCACTTCTGTGTTTTTGCCGAACCCGC GGCGTGCCATCTGCCATCTCTCATGATGTCTCTCAGTGAATCGTGCTGTG TTAGCTATTGCTGTGTTCCAGGGGGTGTTCATATCCATGGCCTGTCGTTT AGCGTCCGTCAAAGCCTGTCTTCTCTCTGTGTTTTCGTAGCAGAAGGCGG CAGGCTAGAACGAAGAGGATGGGTCCGTACAACCTTCGCAACGTCGTGGT TTAGCCGGGCATGAAAAAAGAGGGCTCCTGCCGTGTGTGTAGTTGTTGGG TGCCTCCAGCGGAGCCCGGTCCCTCCTAAGCGCTTAACCACGCGTGTACA TAAGGGTTCTGGAAGCAATACCATCCAACCATGTACGTCTGCGCGGTGGG GGGGTTGGGGTAGTTCAGGAGTTGGGCGTACCAACCAACACGATTTCGTA ACTCATGTTTCTAGGGTAAAACAACTCCTCACCCGCGTTTGTGAGGCGTT TAAATGCCCGAATACCTGCAAACCATTGGGCAACGTGTGAAGAGAAGTAA TGCAACGTTGCAAGGTAGGTTCGGTCAACGTTGTGCAGTTCGTTCATGAG ACATTTTTTGGCTGGGCGGTGAAACGACATGCCCTCTATCAGGCATGGCC GGACGTGTGCAAAGCCGTATGCATTCCTCTGTGCCGTATTGTCGCTGTTG GAAGCAGTAGACCTTAACAATGAAAATCCTAGATATTTTCGTCGATGTGC GTAGGTAGGCTACGAAGTAGAGCCGAATCACTCTACACTTGTGCGACAGA CTTGCACGAGACGCACGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7570:1751..5269+

>mRNA_Ecto-sp13_S_contig7570.18770.1 ID=mRNA_Ecto-sp13_S_contig7570.18770.1|Name=mRNA_Ecto-sp13_S_contig7570.18770.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1074bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7570:1751..5269+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCTTCGCGGGAGGTAGGAAACCTGGCGGTCGCCGCGGCGTTCGCCCT
CTTCTCCGCCTTCCTCTTCTTCGGCCGCGACGAGGCCGGCGCTTGGCGAG
AGAACTTCCTCTACCTCCCCATCGGCGGTTCCACCGCCCCTATCGCCTCC
AATTCCGAGCCCTATGTCCCGGCCGTACACCTGGCCGGCGTAACCGGGGA
CGGCAACAGCAAAGAGCCTCCGGTGGCGTCGGAACCAGATGATGCAGCGG
CGGCAGCGGCAGCGGCGGCGGCAGCGGCGGCAGAATCAGCGGCGGCGGCG
GCGGCGGCAGCAGCTGAAGCAAAGGCAGCAAAGGCAGCGGAGGCAAAGGC
GGCAAAGGCAGCAGTGGCAGCGGAGGCGGAGGCAGCAACAGCGGCGGCGG
CGGCAGCAGCCGCAGCGAAGGCAACGGAACCAGCTAAGGCAAAGGCAGCA
GGCCTCGCCAAGACGCCACTGTCGCCGGACGTTCGGGACCCCGCGACGGG
CTTGGTGTTGCCGAGAACAAAGCAGTTCGCGTCCTCGAAGACGGGGCTCA
TCTGCCTCGGGGTGGGCGTGAGGGTCAAGTCGGTCGCCTTCGTGACTGTC
AACGTCTACACGGTGGGGCTGTACGTCGAGCCGAAGGGTGCGCGAAAAGC
GCTCAAGAGTTACGCCGGCAGGGACCCCGAAGAGTTGAGCAAGGACAAAT
CGGTCTACCGCGTGCTGGGTGGGGCGGGCGACTTCTCCAAGTACCTGCAC
CTCGTGTTCGCGCGGAGCGTCGGAGCGCAGAAAGTTGTTGACGCGTTCAC
CGCCGTCAAGGGCGTGAACCAGGACGTTCTCGACAAGTTTTCAAGCCTGA
CGATGGAGGGCGTAGGGAAGTCCATCGACAGGGAAGAGTCGGTCACACTG
GGGTGGGAGGGTAAGGACAGGCTGGTGGTCTTGGTTCGCGACAAGGAGAT
CGGCAGCGTCGTCGACGAGACCCTCCCTGCGTCGGTGTTCAGCCTTTTCT
TGGGGTCCGACCCGGTCTCGCCGGTGGCGAAGACCGCGTTCGCGGAAGGC
GTGCCCCCGTTCCTGGCAAGCTAA
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