mRNA_Ecto-sp13_S_contig7564.18764.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7564.18764.1 vs. uniprot
Match: D8LFM0_ECTSI (Peptidyl prolyl cis/trans isomerase like n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM0_ECTSI) HSP 1 Score: 501 bits (1289), Expect = 1.120e-172 Identity = 249/260 (95.77%), Postives = 255/260 (98.08%), Query Frame = 1
Query: 1 HSLAGSSRRWIHAMPAAGASLGLPQQPRPCTGRPLMMSSATGAVTGEEICRAAHVLCADEDAAETALTRIKSGEQFGDVAADMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEELSKAKLDGFVNLPLSKFEEWSDKLSGEGAILDADKDTVVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYASHVDSSVGVY 780
+SLAGS+RRWIHA+PAAG SLGLPQQPRPCTGRPLMMSSAT AVTGEEICRAAHVLCADEDAAE ALTRIKSGEQFGDVA DMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEEL KAKLDGFVNLPLSKFEEWSDKLSGEGAILDA+KDTV+MCHHGMRSNQMAQHLATKAGFK+VWNVEGGLHAYASHVDSSVGVY
Sbjct: 49 NSLAGSNRRWIHAVPAAGTSLGLPQQPRPCTGRPLMMSSATDAVTGEEICRAAHVLCADEDAAEAALTRIKSGEQFGDVATDMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEELGKAKLDGFVNLPLSKFEEWSDKLSGEGAILDAEKDTVIMCHHGMRSNQMAQHLATKAGFKRVWNVEGGLHAYASHVDSSVGVY 308
BLAST of mRNA_Ecto-sp13_S_contig7564.18764.1 vs. uniprot
Match: M2Y4U7_GALSU (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y4U7_GALSU) HSP 1 Score: 197 bits (500), Expect = 8.380e-56 Identity = 98/212 (46.23%), Postives = 144/212 (67.92%), Query Frame = 1
Query: 145 ICRAAHVLCADEDAAETALTRIKSGEQFGDVAADMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEELSKAKLDGFVNLPLSKFEEWSDKLSGEGAILDADKDTVVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYASHVDSSVGVY 780
I RA H+L E A+T L ++K+G+ F ++A +S CPSK++GG+LGWF++G MVA FE ACF+ P ++K+QT++GWHV+ + +AI P + VE+ +I S Q VDVRE+ EL A+LD F +LPL ++E+W++++ G +LD +K+T+VMCHHG+RS QM +LA + GF KV N+ GG+ AYA VD S+GVY
Sbjct: 12 IVRARHILVETEGMADTLLEQLKNGQHFAELAKAVSRCPSKERGGELGWFRRGTMVASFEDACFQGKPDQLIKIQTEYGWHVIQVQGQAIEPGSITVEDFAKIYPHQISHV-------QLVDVREQNELELARLDHFFHLPLGEYEKWAEQVES-GELLDKEKETIVMCHHGIRSAQMCSYLAQQ-GFLKVRNLIGGIDAYAHQVDPSIGVY 214
BLAST of mRNA_Ecto-sp13_S_contig7564.18764.1 vs. uniprot
Match: A0A4D9D039_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D039_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.470e-51 Identity = 97/213 (45.54%), Postives = 137/213 (64.32%), Query Frame = 1
Query: 151 RAAHVLCADEDAAETALTRIKSGEQFGDVAADMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEELSKAKLDG--FVNLPLSKFEEWSDK-LSGEGAILDADKDTVVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYASHVDSSVGVY 780
RAAH+L E+ A+ + +++G F ++A S CPS+ +GGDLGWF GQMV FE CF N G + KVQT+FG+H++ + +A P +LG+++ + G +V Q +DVRE +EL +A++ G F+NLPLS+F EW K LSGE +LD DK TVV+CHHG RS Q A L ++AGF +V+N+ GG+H YA VDS + Y
Sbjct: 16 RAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFGPGQMVPAFEEVCFNNPVGALAKVQTEFGYHIIQVNGKATAPGDWHPSQLGDLVAGGQEGREEV----QLIDVREPDELLRAEIKGAGFLNLPLSQFAEWRPKILSGE--LLDKDKKTVVLCHHGGRSMQFASFLTSQAGFTEVYNLSGGIHMYAQLVDSRIPTY 222
BLAST of mRNA_Ecto-sp13_S_contig7564.18764.1 vs. uniprot
Match: A0A7S2Y1W3_9STRA (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1W3_9STRA) HSP 1 Score: 184 bits (466), Expect = 3.400e-50 Identity = 94/209 (44.98%), Postives = 132/209 (63.16%), Query Frame = 1
Query: 151 RAAHVLCADEDAAETALTRIKSGEQFGDVAADMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEELSKAKL---DGFVNLPLSKFEEWSDKLSGEGAILDADKDTVVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYASHVDSS 768
+A+H+L E+ A+ L R+ GE F +A+D S CPSK +GGDLGWF KGQMV EFE CF G + V+TQFGWHV+ + + P+ + V+EL E+LE + G + Q +DVRE +EL K GF+NLPLS+F+ W K+ +G +LD K T+ +CHHG+RS Q LA++AGF+ V NV GG++ Y+ +D S
Sbjct: 64 KASHILVKSEETAKMLLERVNDGEDFAALASDNSDCPSKAQGGDLGWFGKGQMVPEFENVCFTGVKGDVSLVETQFGWHVIKIEGQGFPPKDIDVKELAEVLETTERG------EVQLIDVREADELEGGKNLTDKGFINLPLSEFQTWGRKVV-DGDLLDKSKRTICLCHHGIRSRQAGNFLASQAGFEDVANVVGGINNYSDKIDPS 265
BLAST of mRNA_Ecto-sp13_S_contig7564.18764.1 vs. uniprot
Match: I2CR14_NANGC (Peptidyl prolyl cis trans isomerase like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR14_NANGC) HSP 1 Score: 183 bits (465), Expect = 1.740e-49 Identity = 96/213 (45.07%), Postives = 137/213 (64.32%), Query Frame = 1
Query: 151 RAAHVLCADEDAAETALTRIKSGEQFGDVAADMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEELSKAKLDG--FVNLPLSKFEEWSDK-LSGEGAILDADKDTVVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYASHVDSSVGVY 780
RAAH+L E+ A+ + +++G F ++A S CPS+ +GGDLGWF GQMV FE CF N G + KVQT+FG+H++ + +A P +LG+++ + G +V Q +DVRE +EL +A++ G F+NLPLS+F EW K LSGE +LD +K TVV+CHHG RS Q A L ++AGF +V+N+ GG+H YA VDS + Y
Sbjct: 105 RAAHILVKSEEEADALMAVLENGADFAELAMVESDCPSRKQGGDLGWFGPGQMVPAFEEVCFNNPVGALAKVQTEFGYHIIQVNGKATAPGDWHPSQLGDLVAGGQEGREEV----QLIDVREPDELLRAEIKGAGFLNLPLSQFAEWRPKILSGE--LLDKNKKTVVLCHHGGRSMQFASFLTSQAGFTEVYNLSGGIHMYAQLVDSRIPTY 311
BLAST of mRNA_Ecto-sp13_S_contig7564.18764.1 vs. uniprot
Match: A0A7S2JMB7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Cyanoptyche gloeocystis TaxID=77922 RepID=A0A7S2JMB7_9EUKA) HSP 1 Score: 181 bits (458), Expect = 1.080e-48 Identity = 99/207 (47.83%), Postives = 139/207 (67.15%), Query Frame = 1
Query: 151 RAAHVLCADEDAAETALTRIKSGEQFGDVAADMSSCPSKDKGGDLGWFKKGQMVAEFEAACFE-NDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEELSKAKLDGFVNLPLSKFEEWSDKLSGEGAILDADKDTVVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYASHVDSS 768
RA+H+L + E+ A+ L R+ GE F +A + SSCPS KGGDLGWFK+G MV EFE A FE ++ +VKV+TQFGWH++ + + ++ EE +IL+ GD + Q VDVREE+EL A L GF+NLPL++ E+W+ ++ G G +LD K+T+VMCHHGMRS QM L + GF KV N+ GG++AY+++VD S
Sbjct: 96 RASHILVSGEEQADEILARLNKGEDFAKLARENSSCPSGMKGGDLGWFKRGMMVPEFEQASFEASNLNKVVKVKTQFGWHLLTVTGQRAGIGAVSAEEFKKILD----ERGD---QVQLVDVREEDELRLASLPGFINLPLTQAEKWAPEVEG-GVLLDKSKETIVMCHHGMRSAQMCGFLE-RVGFDKVKNLTGGINAYSNNVDPS 293
BLAST of mRNA_Ecto-sp13_S_contig7564.18764.1 vs. uniprot
Match: A0A8J5X8B1_DIALT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X8B1_DIALT) HSP 1 Score: 174 bits (442), Expect = 1.150e-46 Identity = 97/257 (37.74%), Postives = 155/257 (60.31%), Query Frame = 1
Query: 31 IHAMPAAGASLGLPQQPRPCTGRPLMMSSATGAV--TGEEICRAAHVLCADEDAAETALTRIKSGEQFGDVAADMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEELSKAKLDG--FVNLPLSKFEEWSDKLSGEGAILDADKDTVVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYASHVDSSVGVY*SE 789
+ + A A+ + +P R +++SA GA RAAH+L E+ A+ +++ G FGD+A +S C S+ +GG+LGWF G M +FE ACF+ PG++VKVQ++FGWH++ + P ++ EL ++ A DV QFVDVR +E+S+A + G +VNLP +++ EW DK++ G +L+ +K+T+V+CHHGMRS++ AQ + GF+ V ++ GG+ AYA+ D +VG Y +E
Sbjct: 13 LFGLARASATARVASRPASRLARSAVLASAQGATETARPNQARAAHILVDTEELADAIRAQVEGGMSFGDIAKTVSLCTSRSRGGNLGWFSAGMMTPDFERACFDATPGSLVKVQSEFGWHLIHVEETRAAPTDVSPAELKRRID-----ANDVHG-VQFVDVRSADEVSRASIPGVQWVNLPFNEYSEWGDKVAA-GELLEHEKETIVICHHGMRSSRTAQFMLQN-GFRSVVSLLGGIDAYAAEADPAVGRYQNE 261
BLAST of mRNA_Ecto-sp13_S_contig7564.18764.1 vs. uniprot
Match: A0A2V3IYG3_9FLOR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYG3_9FLOR) HSP 1 Score: 169 bits (429), Expect = 1.370e-45 Identity = 88/211 (41.71%), Postives = 129/211 (61.14%), Query Frame = 1
Query: 151 RAAHVLCADEDAAETALTRIKSGE-QFGDVAADMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEELSKAKLDGFVNLPLSKFEEWSDKLSGEGAILDADKDTVVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYASHVDSSVGVY 780
RA H+L E+ + +++ G+ F D+A +S+CPSKD+GGDLGWFK+ MV EFE A F N PG++VKV+++FGWH++ + + + + V+ELG K G D S Q +D RE EL + L F+NLP+ ++ W+D+ L+ DK+T+VMCHHG+RS LA + GF V N+ GG+ AYA +D+SV Y
Sbjct: 3 RAKHILVDSEEMIDAIKQQLEDGKGNFADLAKLVSTCPSKDRGGDLGWFKRNIMVKEFEEAAFSNPPGSVVKVKSEFGWHLIQVEEHGMAAKSITVDELGR--RFGKDGTDDPLS-VQLIDCRETSELELSSLPNFLNLPMGEYARWADQFENGKLSLEKDKETIVMCHHGIRSANFCSFLA-QHGFTNVRNLIGGIDAYAKKIDNSVPQY 209
BLAST of mRNA_Ecto-sp13_S_contig7564.18764.1 vs. uniprot
Match: S8D8K8_9LAMI (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8D8K8_9LAMI) HSP 1 Score: 162 bits (410), Expect = 1.030e-42 Identity = 91/194 (46.91%), Postives = 121/194 (62.37%), Query Frame = 1
Query: 205 RIKSGEQFGDVAADMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRA--ILPRQMAVEELGEILELAKSGAGDVDSKYQFVDVREEEELSKAKLDGFVNLPLSKFEEWSDKLSGEGAILDADKDTVVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYASHVDSSVGVY 780
R GE GD+A + S CPSKD GG LGW + GQMV EFE A F IV +T+FGWH++ +LS +L +Q+ EL E ++ ++ Q +DVRE +E++KA L GF LPL +F +W +S E D +KDT V+CHHGMRS Q+AQ L T+ GFK+V+NV GG+H YA VD S+ VY
Sbjct: 37 RASEGEDLGDLAVEYSICPSKDDGGMLGWVRTGQMVPEFEEAAFNAPLNKIVSCKTKFGWHLLQVLSERDQLLLKQIQPSELHERMQDPSFF-----NEAQLIDVREPDEVAKAALPGFKVLPLRQFAKWGPVISSE---FDPEKDTYVLCHHGMRSLQVAQWLQTQ-GFKRVFNVSGGIHEYAVKVDESIPVY 221
BLAST of mRNA_Ecto-sp13_S_contig7564.18764.1 vs. uniprot
Match: A0A6T5NIR0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NIR0_HETAK) HSP 1 Score: 166 bits (420), Expect = 2.320e-42 Identity = 92/208 (44.23%), Postives = 128/208 (61.54%), Query Frame = 1
Query: 151 RAAHVLCADEDAAETALTRIKSGEQFGDVAADMSSCPSKDKGGDLGWFKKGQMVAEFEAACFENDPGTIVKVQTQFGWHVVALLSRAILPRQMAVEELGEILE--LAKSGAGDVDSKYQFVDVREEEELSKA---KLDGFVNLPLSKFEEWSDKLSGEGAILDADKDTVVMCHHGMRSNQMAQHLATKAGFKKVWNVEGGLHAYASHV 759
RA H+L DE A+ + +I+ G F +A SSCPSK +GGDLGWF + QMV EFE AC+ + ++KV+TQFGWHV+ L R P + V++L +L A+ A Q VDVRE +EL + GFVN+PLS+ ++W+ K++ G +LD K TVV+C G+RS QMAQ L T+A F+ V +V GG+ AYA +
Sbjct: 174 RARHILVQDEGEADLLMEQIQGGSDFEGLAQQQSSCPSKAQGGDLGWFGRNQMVKEFEEACYAAEVDDLMKVKTQFGWHVLQLTGRKAPPADLTVQDLAALLADPAAREAA-------QLVDVREPDELQREGSLAAQGFVNIPLSQSQDWAPKIA-RGELLDRTKRTVVLCKKGIRSTQMAQFLLTQAEFEDVASVAGGMDAYAQDI 373 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7564.18764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7564.18764.1 >prot_Ecto-sp13_S_contig7564.18764.1 ID=prot_Ecto-sp13_S_contig7564.18764.1|Name=mRNA_Ecto-sp13_S_contig7564.18764.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=248bp MPAAGASLGLPQQPRPCTGRPLMMSSATGAVTGEEICRAAHVLCADEDAAback to top mRNA from alignment at Ecto-sp13_S_contig7564:1310..5258+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7564.18764.1 ID=mRNA_Ecto-sp13_S_contig7564.18764.1|Name=mRNA_Ecto-sp13_S_contig7564.18764.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3949bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7564:1310..5258+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7564:1310..5258+ >mRNA_Ecto-sp13_S_contig7564.18764.1 ID=mRNA_Ecto-sp13_S_contig7564.18764.1|Name=mRNA_Ecto-sp13_S_contig7564.18764.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=744bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7564:1310..5258+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |