prot_Ecto-sp13_S_contig7562.18761.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7562.18761.1
Unique Nameprot_Ecto-sp13_S_contig7562.18761.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length313
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7562.18761.1 vs. uniprot
Match: A0A6H5JQW8_9PHAE (DUF2470 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQW8_9PHAE)

HSP 1 Score: 595 bits (1533), Expect = 2.570e-214
Identity = 296/312 (94.87%), Postives = 305/312 (97.76%), Query Frame = 0 
Query:    1 MHTSSAAATGAAHARAAALSLVLWLFLNTPTTCGFQSTTMMVARASWKEYWLAKNGAKDAPAAVPSTHGAARRSSRTRWEPTRPAWWIAKSPAKVQGAPPVLATPVLDGGSFDKEQITDVLQHEYRHNLVRVAQKYDSLIESVEGVDAITIKELDGDHMQLDVVYCDQGERTCVAVAVPVIFPYHCNDADCVIGVIHELEKAENVEPRPAMANIPPKYVPPELIGTIARICVVMNRDFQDELRNFVRAYGGPVADEMVGNCEMLSLSPDGFMVRSEADPDKPVSIAFSKECQSALDFQKQILLVSERAMAIA 312
            MHTSSAAA+ AAHARAAALSLVL LF NTPTTCGFQ+TTMMVARASWKEYWLAKNGAK+APAAVPST GAARRSSRTRWEPTRPAWWIAKSPAKVQG+PPVL TPVLDGGSFDKEQITDVLQHEYRHNLVRVAQKYDSLIESVEGVDAITIKELDGDHMQLDVVYCDQGERTCVAVAVPVIFPYHCNDADCVIGVIHELE+AENVEPRPAMAN+PPKYV PELIGTIARIC VMNRDFQDELRNFVRA+GGPVADEMVGNCEMLSLSPDGFMVRS+A+PDKPVSIAFSKECQSALDFQKQILLVSERAMAIA
Sbjct:    1 MHTSSAAASRAAHARAAALSLVLCLFFNTPTTCGFQTTTMMVARASWKEYWLAKNGAKNAPAAVPSTRGAARRSSRTRWEPTRPAWWIAKSPAKVQGSPPVLETPVLDGGSFDKEQITDVLQHEYRHNLVRVAQKYDSLIESVEGVDAITIKELDGDHMQLDVVYCDQGERTCVAVAVPVIFPYHCNDADCVIGVIHELEQAENVEPRPAMANVPPKYVSPELIGTIARICAVMNRDFQDELRNFVRAFGGPVADEMVGNCEMLSLSPDGFMVRSDANPDKPVSIAFSKECQSALDFQKQILLVSERAMAIA 312
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7562.18761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JQW8_9PHAE2.570e-21494.87DUF2470 domain-containing protein n=2 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019595Domain of unknown function DUF2470PFAMPF10615DUF2470coord: 228..298
e-value: 1.8E-7
score: 31.7
IPR037119Haem oxygenase HugZ-like superfamilyGENE3D3.20.180.10coord: 226..308
e-value: 4.1E-7
score: 31.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..312
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 16..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..34
score: 0.805

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7562contigEcto-sp13_S_contig7562:3182..7235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7562.18761.1mRNA_Ecto-sp13_S_contig7562.18761.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7562 3155..7235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7562.18761.1 ID=prot_Ecto-sp13_S_contig7562.18761.1|Name=mRNA_Ecto-sp13_S_contig7562.18761.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=313bp
MHTSSAAATGAAHARAAALSLVLWLFLNTPTTCGFQSTTMMVARASWKEY
WLAKNGAKDAPAAVPSTHGAARRSSRTRWEPTRPAWWIAKSPAKVQGAPP
VLATPVLDGGSFDKEQITDVLQHEYRHNLVRVAQKYDSLIESVEGVDAIT
IKELDGDHMQLDVVYCDQGERTCVAVAVPVIFPYHCNDADCVIGVIHELE
KAENVEPRPAMANIPPKYVPPELIGTIARICVVMNRDFQDELRNFVRAYG
GPVADEMVGNCEMLSLSPDGFMVRSEADPDKPVSIAFSKECQSALDFQKQ
ILLVSERAMAIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019595DUF2470
IPR037119Haem_oxidase_HugZ-like_sf