mRNA_Ecto-sp13_S_contig7562.18760.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7562.18760.1
Unique NamemRNA_Ecto-sp13_S_contig7562.18760.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7562.18760.1 vs. uniprot
Match: A0A6H5JND9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JND9_9PHAE)

HSP 1 Score: 603 bits (1556), Expect = 3.300e-216
Identity = 309/320 (96.56%), Postives = 312/320 (97.50%), Query Frame = 2
Query:   32 MFTANRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLVAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPTSEAVSVQKRPASKAERYPFQPQGGGLGCTLDGTATVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPNAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLARSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFMPEADVLQDLSSSSLLLGVEFSYDFASVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD 991
            MFTA+RLRRFDLGQKAVQGVLDKSLVGALVSIASVTL+AVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVP SEAVSV KRPASK ERYPFQPQGGGLGCTLDGT TVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGP AVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLARSTFVSE GSGLVKYSLKVVPI HRRMHGAEVNTHTYSSNVAF+PEADVLQDLSSSSLLLGVEFSYDF SVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD
Sbjct:    1 MFTASRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLMAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPNSEAVSVHKRPASKTERYPFQPQGGGLGCTLDGTVTVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPKAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLARSTFVSEAGSGLVKYSLKVVPIFHRRMHGAEVNTHTYSSNVAFVPEADVLQDLSSSSLLLGVEFSYDFTSVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD 320          
BLAST of mRNA_Ecto-sp13_S_contig7562.18760.1 vs. uniprot
Match: A0A7S2UYF2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYF2_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.350e-31
Identity = 95/315 (30.16%), Postives = 163/315 (51.75%), Query Frame = 2
Query:   50 LRRFDLGQKAVQGVLDKSLVGALVSIASVTLVAVLVISELLAYIKVDTSSHMAVADFHE--HDAVTARLHATFPFVECKDLEVVTDHPQGGVPT------SEAVSVQKRPASKAERYPFQPQGG---GLGCTLDGTATVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPNAVAGQNMTHKIHDFGFGPPVKGPVGV-GRNSLARSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTH-TYSSNVAFMPEADVLQDLSSSSLLLGVEFSYDFASVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFV 955
            ++  D   K +  + +K+  GA+VSIAS+ ++A+L+ISE+  Y KVD  SHM V+   E         LH TFP + C+DL++  ++ +GG         S + ++  R +   E   F+ +        CT++G+  + R  G+I I      P  +      L     +  + PN      ++H IH+  FG  + G   + G   L  +    + GSGL +Y +K+VP ++  +H   V  H  YS    F+ ++  +  LS+    LG+E SYDF+ +MV+Y + ++S+F+ +T++CAI+GG++T S L V
Sbjct:    7 MKSLDGFSKPMADIQEKTTAGAVVSIASLAIMALLLISEIWLYFKVDVVSHMGVSHLKEGMEQPFDVHLHITFPHMRCEDLDLRVENLKGGDAADVMKMLSSSKTLDMRQSKPNEVVLFKDEARFKMNETCTVEGSLKLPRVGGSIDI-ASRRKPVDIASLLSALFLNTAQLGNVPN------VSHVIHELWFGDKILGGDQMAGSLPLKDACNAVDHGSGLFRYEVKIVPTTYEWLHTHRVKEHYQYSVVENFVKDSAGISSLST----LGLEISYDFSPIMVEYVEQKQSIFQFLTNLCAIMGGVFTTSSLLV 310          
BLAST of mRNA_Ecto-sp13_S_contig7562.18760.1 vs. uniprot
Match: A0A7S2AXB8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXB8_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.030e-29
Identity = 99/309 (32.04%), Postives = 155/309 (50.16%), Query Frame = 2
Query:   41 ANRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLVAVLVISELLAYIKVDTSSHMAV-ADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPTSEAV-SVQKRPASKAERYPFQPQGGGLGCTLDGTATVERAAGTIMIHV----MHHDPSRVIFTGRFLARTKGETRSGPNAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLARSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFMPEADVLQDLSSSSLLLGVEFSYDFASVMVKYTDTRRSMFELITSVCAIVGGIYTVSGL 949
            A+ L++FD+  KA+ GV  ++L GA++++AS TL+ +L  SELL +  V T  HM V +   +  +V   LHATFP + C    +  +  +G  PT + V S+ K P  +             GC+L G   V +  G   I      +   P   + +G  L    G   S      G NM+H IH   FGP   G      N L   T V     G  ++ +KV+P  ++ +  + V ++ YS +  F+ + D++  L +SS   G+ F YDF  VMV+Y + + S+ + +T +C I+GGI+TVSGL
Sbjct:    2 ADWLKKFDVHVKALDGVRKRTLPGAILTLASSTLIVLLCFSELLVFSSVKTVHHMTVDSAAADRPSVRISLHATFPHLACDSTNLEVEATRGD-PTMDVVNSIVKTPVGEG------------GCSLKGELLVGKVGGNFHISTGMAGLPSSPMLQLSSG--LMSATGLMGS----FKGVNMSHTIHHLSFGPKFPGRS----NPLEEVTNVVSTDVGQYQFHIKVIPTVYKYLRRSPVYSNQYSLSEQFV-KLDLMSALKASSAP-GIFFYYDFYPVMVEYDEEKVSILQFLTRICGIIGGIFTVSGL 285          
BLAST of mRNA_Ecto-sp13_S_contig7562.18760.1 vs. uniprot
Match: A0A7S1CC96_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CC96_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.500e-24
Identity = 85/308 (27.60%), Postives = 145/308 (47.08%), Query Frame = 2
Query:   50 LRRFDLGQK-AVQGVLDKSLVGALVSIASVTLVAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPTSEAVSVQKRPASKAERYPFQPQGGGLGCTLDGTATVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPNAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLARSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFMPEADVLQDLSSSSLLLG-------VEFSYDFASVMVKYTDTRRSMFELITSVCAIVGGIYTVSGL 949
            ++ FDL  K A + ++ ++L GA+++ A   L   LV++E   +   +   H+ V D      +   L+  FP V C+DL V     +G       V+++K P   A++    P     GC + GTATV + AG I I                 A+  G  R G  A    N +H I    FG P  G V     +L   T    +     +Y ++ VP  +  + GA + +H YS+   F+ + +        ++++G       V F ++F+ VMV+  +T+R++ + +TS+CAIVGG++TV+G+
Sbjct:    1 MKAFDLHVKVAHEHLVKRTLCGAVLTAAFAALSVALVVNEASLWATTEVEDHLRV-DAGVSMPLDVALNIAFPHVRCRDLRVTVSDARGLTYAELRVNLEKTPFPDADKGDQAP-----GCVVAGTATVRKVAGLINIEA------------GAAAQIPGFRRDGDTAAL--NTSHVIRKLSFGDPFPGMV----EALGGFTSPPRDKPARYQYFIQAVPTVYEPLRGARIASHQYSAT-KFVTDVEAPDANDFEAIMMGGGVQPAGVYFKFEFSPVMVRVVETKRTVLQFLTSICAIVGGVFTVAGM 283          
BLAST of mRNA_Ecto-sp13_S_contig7562.18760.1 vs. uniprot
Match: A0A6G0WYB9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYB9_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.060e-21
Identity = 82/316 (25.95%), Postives = 142/316 (44.94%), Query Frame = 2
Query:   44 NRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLVAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPTSEAVSVQKRPASKAERYPFQPQGGGLGCTLDGTATVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPNAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLARSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFMPEADVLQDLSSSSLLLGVEFSYDFASVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD 991
            +RLR++D+  K V+G+ +K+ VGA++++ SV +  +L +SEL  Y   +  + M V    +   +   +  +F   +C D+ +     +G        ++   P   AE         G GC   G+  V + AG++      H+ S  +F+     +               N +H +H   FGP +   V    N L       E+   L KYSL VVP  +  ++G+ + T+ YS         D       +    GV F Y+F+ + V+Y +T+ S  + ITS CAI+GG++ V+ +    +  VS +K D
Sbjct:    3 SRLRQYDVYTKGVEGIQEKTAVGAVITVLSVAVALLLFLSELNMYTTTEVVNRMYVDTMPQDTIMHIEVDISFLHEKCSDVSMDASDSKGNKGLLSDSNIASVPIG-AE---------GEGCRFTGSVDVHKIAGSVSFA---HEGSLNMFSFMDFLQF--------------NSSHIVHRLTFGPEIPNMV----NPLENVHKTVEKNVALYKYSLSVVPTQYTPLYGSPIQTYQYSVTEYTSEPHD-----GGTLSFPGVSFMYEFSPIKVEYIETKPSFLQFITSTCAILGGVFAVARILDSIIYSVSSRKLD 282          
BLAST of mRNA_Ecto-sp13_S_contig7562.18760.1 vs. uniprot
Match: UPI001C7274B9 (endoplasmic reticulum-Golgi intermediate compartment protein 1 isoform X1 n=6 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C7274B9)

HSP 1 Score: 100 bits (250), Expect = 1.940e-20
Identity = 80/310 (25.81%), Postives = 138/310 (44.52%), Query Frame = 2
Query:   56 RFDLGQKAVQGVLDKSLVGALVSIASVTLVAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPTSEAVSVQKRPASKAERYPFQPQGGGLGCTLDGTATVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPNAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLAR--STFVSEEGSGLVK------YSLKVVPISHRRMHGAEVNTHTYS----SNVAFMPEADVLQDLSSSSLLLGVEFSYDFASVMVKYTDTRRSMFELITSVCAIVGGIYTVSGL 949
            RFD+ +K  + +   +L GA++S+     + +L +SE L ++ V   S + V +  ++D +   L+ T P ++C  + +      G        + +K P     +          GC  +G+  + +  G    HV  H  S                 S P+A+   +M H IH+  FG  V G +    N L     +   ++GS L        Y +K+VP  +  ++G +V T+ Y+    S+V F           S  ++  + F YD   + VKYT+TR  ++  +T+VCAIVGG +TV+GL
Sbjct:   13 RFDIYRKIPKDLTQPTLTGAIISVCCXXFILILFLSEFLHFMNVSVISELFVDNPGDNDRILVHLNVTLPNLQCSVIGLDIQDEMGRHEVGFVENTEKVPVGPDNK----------GCRFEGSFYINKVPGNF--HVSTHSAS-----------------SQPDAI---DMRHIIHECSFGTKVAGKIKGSFNPLKEIDRSGARDDGSTLFADIESHDYVMKIVPTIYESLNGLKVETYQYTYAYKSSVTFS---------HSGRIMPAIWFRYDLTPITVKYTETRPPLYSFLTTVCAIVGGTFTVAGL 281          
BLAST of mRNA_Ecto-sp13_S_contig7562.18760.1 vs. uniprot
Match: A0A7S4A3Y7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3Y7_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 7.830e-20
Identity = 90/308 (29.22%), Postives = 148/308 (48.05%), Query Frame = 2
Query:   74 KAVQGVLDKSLVGALVSIASVTLVAVLVISELLAYIKVDTSSHMAVAD---------FHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPTSEAVSVQKRPASKAERYPFQPQGGGLGCTLDGTATVERAAGTIMIHVMHHD-PSR--VIFTGRFLARTKGETRSGPNAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLARST----FVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFMPEADVLQDLSSSSLLLGVEFSYDFASVMVKYTDTRRSMFELITSVCAIVGGIYTVSGL 949
            +AV+GV ++++ GAL++   V L+  L+  EL +Y   ++  H+ V D         FH  D +   L ATF  V+C DLE+  +  +G     + ++ ++ P +K E Y +       GCTLDG   V + +    + +     P++  VI    FL       R   NA   +NMTHK+H F FG          R+S+ ++      VS +  G  +Y+LKV+P         +V  + YS   +++    +  D   S+ + G+ F YDF  VMV+    R S+ E + S+CA+VGG   ++ L
Sbjct:    8 RAVEGVQERTVSGALITGGCVLLILSLLTGELSSYFYPNSIHHLGVDDGDASIGSRPFHVPDRLPIELSATFAHVKCDDLELSIEAARGLRDAVDRINFRE-PHAK-ELYGWSDASTSEGCTLDGKLRVGKVSAHFSVGLTAAAAPAKPNVIMVQSFL-------RQATNAGPSKNMTHKVHVFRFGS---------RSSVTKNAPLDGLVSPDLDGQARYALKVIPTVLDDGWFPQV-ANQYSLAESYVSAKQLQTD---STAVPGIVFFYDFFPVMVQVKKERTSILEFLVSLCAVVGGCVALASL 293          
BLAST of mRNA_Ecto-sp13_S_contig7562.18760.1 vs. uniprot
Match: UPI0006B0895B (endoplasmic reticulum-Golgi intermediate compartment protein 1-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0895B)

HSP 1 Score: 98.2 bits (243), Expect = 1.380e-19
Identity = 79/304 (25.99%), Postives = 133/304 (43.75%), Query Frame = 2
Query:   50 LRRFDLGQKAVQGVLDKSLVGALVSIASVTLVAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPTSEAVSVQKRPASKAERYPFQPQGGGLGCTLDGTATVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPNAVAGQNMTHKIHDFGFGPPVKGPVGVGRNSLARSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVN----THTYSSNVAFMPEADVLQDLSSSSLLLGVEFSYDFASVMVKYTDTRRSMFELITSVCAIVGGIYTVSGL 949
            +RRFD+ +K  + +   +L GA+VS+     + VL +SE L++I  +  S + V +   +D +  RL+ + P + C  L +      G        + +K P +            G GC  +G+  + +  G    HV  H  S+                  P+++   +M H IH+  FG  VK       N L        +  G   Y +K+VP  +  + G +      T+ Y + VAF           S  ++  + F YD   + VKYT+ R+ ++  IT+VCAIVGG +TV+G+
Sbjct:    5 VRRFDIYRKIPKDLTQPTLTGAVVSVCCCFFILVLFLSEFLSFISTEVVSELYVDNPGTNDKILVRLNISLPRLSCDVLGLDIQDEMGRHEVGFVENTEKVPLND-----------GKGCRFEGSFYINKVPGNF--HVSTHAASKQ-----------------PDSI---DMGHFIHEVSFGQKVKDQSRGSFNPLKDVNKEDSQDIGSHDYVMKIVPTIYEDLSGQKTESYQYTYAYKTYVAFS---------HSGRIIPAIWFRYDLNPITVKYTEKRQPLYSFITTVCAIVGGTFTVAGI 266          
BLAST of mRNA_Ecto-sp13_S_contig7562.18760.1 vs. uniprot
Match: A0A4Y2EA24_ARAVE (Endoplasmic reticulum-Golgi intermediate compartment protein 1 n=3 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2EA24_ARAVE)

HSP 1 Score: 96.7 bits (239), Expect = 6.970e-19
Identity = 85/326 (26.07%), Postives = 143/326 (43.87%), Query Frame = 2
Query:   50 LRRFDLGQKAVQGVLDKSLVGALVSIASVTLVAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPTSEAVSVQKRPASKAERYPFQPQGGGLGCTLDGTATVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPNAVAGQNMTHKIHDFGFGP------------PVKGPV----GVGRNSLARSTF------VSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYS----SNVAFMPEADVLQDLSSSSLLLGVEFSYDFASVMVKYTDTRRSMFELITSVCAIVGGIYTVSGL 949
            +RRFD+ +K  + +   +L GA++S+        L ISE L +I V+ SS + V +  ++D +   L+ + P + C  L +      G        ++ KRP  + E           GC  +G   + +  G    HV  H  S                 + P+++   +M H IH+  FG             P+KG      G+ R S AR+ F      +S+       Y +K+VP  +  + G ++ T+ Y+    S+V F           S  ++  + F YD   + VKYT++R  ++  +T+VCAIVGG +TV+GL
Sbjct:    5 VRRFDIYRKIPKDLTQPTLTGAVISVCXXXXXXXLFISEFLHFINVNVSSELFVDNPGDNDRILVHLNISLPRLSCSVLGLDIQDEMGRHEVGFVENILKRPLGEKEE----------GCLFEGRFYINKVPGNF--HVSTHSAS-----------------TQPDSI---DMAHIIHEVSFGTRMPFEELTKGDSPIKGSFNPLRGIDR-SKARAFFDDDLILISDLNIESHDYVMKIVPTIYETLDGLKIETYQYTYAYKSSVTFS---------HSGRIMPAIWFRYDLTPITVKYTESRPPLYSFLTTVCAIVGGTFTVAGL 288          
BLAST of mRNA_Ecto-sp13_S_contig7562.18760.1 vs. uniprot
Match: W4G1C2_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1C2_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 8.420e-19
Identity = 85/330 (25.76%), Postives = 140/330 (42.42%), Query Frame = 2
Query:   44 NRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLVAVLVISELLAYIKVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPTSEAVSVQKRPASKAERYPFQPQGGGLGCTLDGTATVERAAGTIMIHVMHHDPSRVIFTGRFLARTKGETRSGPNAVAGQNMTHKIHDFGFGPPVKGPVG--------VGRNSLARSTFVSEEGSGLV------KYSLKVVPISHRRMHGAEVNTHTYSSNVAFMPEADVLQDLSSSSLLLGVEFSYDFASVMVKYTDTRRSMFELITSVCAIVGGIYTVSGLFVRGLQVVSPKKHD 991
            NRLR++D+  K V G+ +K++ GA++++ SV +V +L +SEL  Y   +  + M V    +   +   +  TF   +C D+ +     +G        ++   P    E           GC L GT  V + AG +     H     +     FL                 N +H +H   FGP +   V         V +N     +++S     LV      KY L +VP  H  ++G  V T+ YS    +  E      LS      GV F Y+F+ + V+Y +++ S  + +TS  AIVGG++ V+ +    +  VS +K D
Sbjct:    3 NRLRQYDVYTKGVDGIQEKTMGGAIITVISVAIVILLFLSELGLYTTTEVVNRMHVDTVPQDAVMRIEVDITFLHEKCADVAMDASDIKGNKDLLSDSNIAAVPVVSDESE---------GCRLTGTVDVHKVAGVVSF--AHAGSLNMFSFSDFLEF---------------NSSHVVHRLSFGPEIPNMVNPLENVHKTVEKNGRYLPSYLSFIIRHLVIVVALYKYGLSIVPTQHTPLYGPPVQTYQYSVT-EYTSEPSEEGALSFP----GVSFMYEFSPIKVEYVESKPSFLQFVTSTSAIVGGVFAVARIVDSLIYSVSSRKMD 301          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7562.18760.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JND9_9PHAE3.300e-21696.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UYF2_9STRA2.350e-3130.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2AXB8_9STRA1.030e-2932.04Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1CC96_9STRA4.500e-2427.60Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A6G0WYB9_9STRA1.060e-2125.95Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
UPI001C7274B91.940e-2025.81endoplasmic reticulum-Golgi intermediate compartme... [more]
A0A7S4A3Y7_9STRA7.830e-2029.22Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
UPI0006B0895B1.380e-1925.99endoplasmic reticulum-Golgi intermediate compartme... [more]
A0A4Y2EA24_ARAVE6.970e-1926.07Endoplasmic reticulum-Golgi intermediate compartme... [more]
W4G1C2_9STRA8.420e-1925.76Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7562contigEcto-sp13_S_contig7562:49..2865 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score607.8
Seed ortholog evalue2.9e-171
Seed eggNOG ortholog2880.D7G740
Model size1198
KEGG koko:K20365,ko:K20367
Hectar predicted targeting categorysignal anchor
GOsGO:0008150,GO:0009825,GO:0009987,GO:0016049,GO:0040007
Exons3
EggNOG free text desc.vesicle-mediated transport
EggNOG OGsCOG0445@1,KOG2667@2759
Ec32 ortholog descriptionEndoplasmic reticulum vesicle transporter, C-terminal
Ec32 orthologEc-01_011140.1
Cds size963
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464025.4191768-UTR-Ecto-sp13_S_contig7562:48..2521681464025.4191768-UTR-Ecto-sp13_S_contig7562:48..252Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7562 49..252 -
1681464025.4762418-UTR-Ecto-sp13_S_contig7562:2834..28651681464025.4762418-UTR-Ecto-sp13_S_contig7562:2834..2865Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7562 2835..2865 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464025.440709-CDS-Ecto-sp13_S_contig7562:252..9651681464025.440709-CDS-Ecto-sp13_S_contig7562:252..965Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7562 253..965 -
1681464025.453248-CDS-Ecto-sp13_S_contig7562:1718..18801681464025.453248-CDS-Ecto-sp13_S_contig7562:1718..1880Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7562 1719..1880 -
1681464025.464657-CDS-Ecto-sp13_S_contig7562:2746..28341681464025.464657-CDS-Ecto-sp13_S_contig7562:2746..2834Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7562 2747..2834 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7562.18760.1prot_Ecto-sp13_S_contig7562.18760.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7562 253..2834 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7562.18760.1

>prot_Ecto-sp13_S_contig7562.18760.1 ID=prot_Ecto-sp13_S_contig7562.18760.1|Name=mRNA_Ecto-sp13_S_contig7562.18760.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=321bp
MFTANRLRRFDLGQKAVQGVLDKSLVGALVSIASVTLVAVLVISELLAYI
KVDTSSHMAVADFHEHDAVTARLHATFPFVECKDLEVVTDHPQGGVPTSE
AVSVQKRPASKAERYPFQPQGGGLGCTLDGTATVERAAGTIMIHVMHHDP
SRVIFTGRFLARTKGETRSGPNAVAGQNMTHKIHDFGFGPPVKGPVGVGR
NSLARSTFVSEEGSGLVKYSLKVVPISHRRMHGAEVNTHTYSSNVAFMPE
ADVLQDLSSSSLLLGVEFSYDFASVMVKYTDTRRSMFELITSVCAIVGGI
YTVSGLFVRGLQVVSPKKHD*
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mRNA from alignment at Ecto-sp13_S_contig7562:49..2865-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7562.18760.1 ID=mRNA_Ecto-sp13_S_contig7562.18760.1|Name=mRNA_Ecto-sp13_S_contig7562.18760.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2817bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7562:49..2865- (Ectocarpus species13 EcNAP12_S_4_19m)
TCTTGATGCAATAACCTACCCTCCTTGCGGGATGTTTACAGCTAACAGGC TTCGGCGGTTTGACCTAGGTCAAAAGGCCGTCCAAGGCGTCCTCGACAAA TCTCTCGTGGGAGCATTAGGTGAGTTGAGTTCCTCCGCGTTTTCTGGCTC CCGTCGCCTGCTGTCGTGTGCAGTCCCCAAACCAAAGATGTTCTCACCCC AACGCCTCCGCTGCCGTTCTCCACTAAAGTCATCGCTGCCCTGGCGTAGA TGGCGAACATCACCCTCACGCACGGGTCCACTTCGTCTCCTCTAGGCGCA CCCCCATGTCCCTTGGTAGATTTGGGGTAGTCTCATGCATGTACATCAGG CGACGCCGTGCTCTCGGGGTGTTGCGATAATTGCATACACTCGTGTTTTC ATGGTGGGTTCAGGTGGGTCGGGGTACGGTACAACTACAATGTAGCCACT TTGATTGATGGTCGATTGCGTGAGGAACCACACCTCCTTGGACCAGTTTT CAGGCTCGATATCTCCTTTTTAAAGCATCATGTGCATATGTTACAGCACG TTTTGTTGGTTGAGATATCCGACGATCTTTGAGAAACCTGACCTGTGAAT ACCTAGGCCTGTATCGAGCGTAAGGGGCTTCTGAAACGGGCGGTATCTGC TTGAAGTCTAATCTACCAGGAAACATCTGAAACCACCAGCCGGTGGAGAG AGTCCCGATCTCAGATACTACATGAGTAGAGGGCATCATAGATCAGCGAC CTCATCGTGTTTTTCCATGTTGACAAAACAGCAGTTGTACCCTGCCGCGC AATCTGGACCTTTGGCCTGTAGACTTTCTGGGTGTCACATTTTCAACGTT GAAATAGGCGTTGGCGCGGGCTTGTCGAATCTCGAAACTAAATGCCTATC GATATCAGCATTTGATAAGTGTAAAGACAGCATGATCATGTTCTCCCGCG TGTTCAACGTTCCTGCTCGGTGGCCCGTCGAACAGTTTCAATTGCTTCAG TGACGCTTGTGGCGGTGCTCGTCATATCGGAGCTGCTGGCGTACATCAAA GTGGACACCTCGAGCCACATGGCGGTCGCGGACTTCCACGAGCACGACGC CGTTACCGCTCGGTTGCACGCCACGTTTCCCTTCGTAGAATGCAAAGGTC AGTGCGAACTGCGGTGTGAATGTGTTCTTGCCGACGCCGTGCAGTCGTCC TCCACCAGTAGCCGAAGCTGCTGCGAAGAGGCGTGCTGTGTTCCGTGTGA TGTGGTGTTGGTTTCGACGATTGCTCACAAGATCAGGGATGAAGATACCT AATTTATTGCTGGTGGGGTATAGTGGACACTGCGCGTTCTTCTAGGTGCC GTCAGTGAGCTTGCGTTCCTTGAAATGGTGTTGTGTTTCCAGCATGCGGC CAGCTAGCTGTCTCAACAGCTATTGCGGCCCCCATGTGTTGCAGATACAC AGACTCTGTATTGCTGAGCTTACCTGTAGTCACACCGGTGCATGTCATGA TGTGATTACATTCAGTAAACTTCTTGTACGAACCGCCCCCAATCTACACG TTCAAATGTTTTGCCCTGCGGGCTGGTACGTGACGTTTTTAGTTTGGTAC GGAATCCTGATCTGTATGAGGACTGGCGAAATCTCAGCTTCGCAGAAGTA ATGATCATTCGCTCGTTTTTCATCCATACCCCTCGGGTACAGTAGGCGTG TTGGGACATACATGACTTGCAAGCTTCATACACACGAGTAGTTTTAAGCA CCCGAATGTTGTTCGCGTCTCCATCACGCGAATAAGTTGTGCGCGGCCTC AGGAAGGAAGGTGACGCCCGGGCCAATGCTCACCTCGCGAGCACAAACAA CGAGTTGCCTCCTCGCTCCCCCGCCTGCTGTTCCTTCTGCCAACCAACAG ACTTGGAGGTCGTCACTGATCATCCTCAAGGGGGTGTTCCAACCTCGGAG GCGGTATCGGTACAGAAGAGACCAGCATCGAAGGCCGAGAGATATCCGTT CCAACCGCAAGGTGGCGGCCTGGGCTGCACGTTGGATGGGACGGCAACCG TAGAGAGGGCGGCCGGGACGATCATGATCCACGTGATGCACCACGACCCT TCCCGGGTCATCTTTACGGGCAGGTTTCTTGCCCGGACGAAGGGAGAGAC CCGGTCCGGTCCCAATGCCGTTGCGGGCCAGAACATGACCCACAAGATCC ACGACTTTGGGTTCGGGCCTCCGGTGAAGGGACCGGTGGGGGTGGGAAGG AATTCCTTGGCGAGGAGCACGTTCGTGTCGGAGGAGGGGTCGGGCTTGGT CAAGTACTCCTTGAAGGTGGTGCCGATCTCTCACCGACGTATGCACGGGG CAGAGGTCAACACCCACACGTACTCGTCCAACGTTGCCTTCATGCCAGAA GCTGACGTGCTACAAGACCTGTCTTCGTCATCGCTACTTTTGGGCGTCGA GTTCTCGTACGACTTTGCCAGCGTCATGGTCAAATACACCGACACGAGGC GGTCGATGTTCGAGTTGATAACCAGCGTTTGCGCTATCGTCGGAGGGATT TATACTGTTAGCGGTCTGTTTGTGCGGGGTTTGCAAGTGGTTTCGCCAAA GAAGCACGATTGACCGGGTCAACTGTGCCGCGTTAGGCGTTGTATATGGC TATCTTCACGTCCACGAGGATGATTGGTCGCGATACGAATTGTTTTTCAA GACGCTTGTTTAGTTAAAGCAACAATTTGCAAGTGGTGGCAGCATGTCAT GCCATTTCCGCTGCTGCAAACAGCGCACCGACTGGCAATCAAACCCTTAT GGGATATTTGGCCTTTC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7562:49..2865-

>mRNA_Ecto-sp13_S_contig7562.18760.1 ID=mRNA_Ecto-sp13_S_contig7562.18760.1|Name=mRNA_Ecto-sp13_S_contig7562.18760.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=963bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7562:49..2865- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTTTACAGCTAACAGGCTTCGGCGGTTTGACCTAGGTCAAAAGGCCGT
CCAAGGCGTCCTCGACAAATCTCTCGTGGGAGCATTAGTTTCAATTGCTT
CAGTGACGCTTGTGGCGGTGCTCGTCATATCGGAGCTGCTGGCGTACATC
AAAGTGGACACCTCGAGCCACATGGCGGTCGCGGACTTCCACGAGCACGA
CGCCGTTACCGCTCGGTTGCACGCCACGTTTCCCTTCGTAGAATGCAAAG
ACTTGGAGGTCGTCACTGATCATCCTCAAGGGGGTGTTCCAACCTCGGAG
GCGGTATCGGTACAGAAGAGACCAGCATCGAAGGCCGAGAGATATCCGTT
CCAACCGCAAGGTGGCGGCCTGGGCTGCACGTTGGATGGGACGGCAACCG
TAGAGAGGGCGGCCGGGACGATCATGATCCACGTGATGCACCACGACCCT
TCCCGGGTCATCTTTACGGGCAGGTTTCTTGCCCGGACGAAGGGAGAGAC
CCGGTCCGGTCCCAATGCCGTTGCGGGCCAGAACATGACCCACAAGATCC
ACGACTTTGGGTTCGGGCCTCCGGTGAAGGGACCGGTGGGGGTGGGAAGG
AATTCCTTGGCGAGGAGCACGTTCGTGTCGGAGGAGGGGTCGGGCTTGGT
CAAGTACTCCTTGAAGGTGGTGCCGATCTCTCACCGACGTATGCACGGGG
CAGAGGTCAACACCCACACGTACTCGTCCAACGTTGCCTTCATGCCAGAA
GCTGACGTGCTACAAGACCTGTCTTCGTCATCGCTACTTTTGGGCGTCGA
GTTCTCGTACGACTTTGCCAGCGTCATGGTCAAATACACCGACACGAGGC
GGTCGATGTTCGAGTTGATAACCAGCGTTTGCGCTATCGTCGGAGGGATT
TATACTGTTAGCGGTCTGTTTGTGCGGGGTTTGCAAGTGGTTTCGCCAAA
GAAGCACGATTGA
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