prot_Ecto-sp13_S_contig7560.18757.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig7560.18757.1
Unique Name	prot_Ecto-sp13_S_contig7560.18757.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	169

Homology

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BLAST of mRNA_Ecto-sp13_S_contig7560.18757.1 vs. uniprot
Match: D8LIL8_ECTSI (Nucleoside diphosphate kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIL8_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 1.810e-105
Identity = 159/163 (97.55%), Postives = 160/163 (98.16%), Query Frame = 0

Query:    1 MMAKTLLCGLVAFLPAALGFVVPTASSSAFARGSGVAHVSATIAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV 163
            MMAKTLLCGLV  LPAALGFV+PTASSSAFARGSGVAHVSAT APSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV
Sbjct:    1 MMAKTLLCGLVTLLPAALGFVMPTASSSAFARGSGVAHVSATTAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV 163

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BLAST of mRNA_Ecto-sp13_S_contig7560.18757.1 vs. uniprot
Match: A0A836CHD7_9STRA (Nucleoside diphosphate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD7_9STRA)

HSP 1 Score: 197 bits (500), Expect = 2.410e-61
Identity = 103/147 (70.07%), Postives = 118/147 (80.27%), Query Frame = 0

Query:   17 ALGFVVPTASSSAFARGSGVAHVSATIAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV 163
            A+ FV P+        G+ V H +AT   S  ++ TMAMERSYIMIKPDGVQRGLVG+II+RFE+RGYKLA +KLKQADE LLK+HY+DL  KPFFPKL+ YM+SGPVVCM WEGKDVVA GRKMLG TNPL SAPGTIRGDF L+V
Sbjct:   14 AMAFVAPSFM------GAQVQHRAAT--SSIQTQWTMAMERSYIMIKPDGVQRGLVGEIISRFEKRGYKLAAMKLKQADEDLLKEHYRDLASKPFFPKLMGYMLSGPVVCMCWEGKDVVAQGRKMLGATNPLESAPGTIRGDFSLDV 152

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BLAST of mRNA_Ecto-sp13_S_contig7560.18757.1 vs. uniprot
Match: A0A7S2EER7_TRICV (Nucleoside diphosphate kinase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EER7_TRICV)

HSP 1 Score: 183 bits (465), Expect = 1.920e-55
Identity = 99/156 (63.46%), Postives = 116/156 (74.36%), Query Frame = 0

Query:   11 VAFLPAAL--GFVVPTASSSAFA-RGSGVAHVSATIAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV 163
            VAFL AAL  G     A +S F  R +  + V+A +A S+ +  +MAMER+YIMIKPDGVQRG+VG I++RFE +GY L  LK K A   LL +HYKDLVDKPFFPKL  YM+SGPVVCM WEGK+ V  GRKMLG TNPL SAPGTIRGDFC+EV
Sbjct:   41 VAFLYAALLAGAADAFAPTSTFVGRPAFTSAVAAPVAKSSATELSMAMERTYIMIKPDGVQRGIVGNILSRFESKGYHLVALKTKMATAELLDQHYKDLVDKPFFPKLRDYMLSGPVVCMVWEGKEAVTTGRKMLGATNPLESAPGTIRGDFCVEV 196

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BLAST of mRNA_Ecto-sp13_S_contig7560.18757.1 vs. uniprot
Match: A0A7R9VG66_9STRA (Nucleoside diphosphate kinase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VG66_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.340e-53
Identity = 82/117 (70.09%), Postives = 98/117 (83.76%), Query Frame = 0

Query:   47 AVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV 163
            A S  +MAMER+YIMIKPDGVQRG+VG I++RFE +GY L  +K K A + LL++HYKDLV+KPFFPKL  YM+SGPVVCM WEG++ V+ GRKMLG TNPL SAPGTIRGDFC+EV
Sbjct:   14 ASSSLSMAMERTYIMIKPDGVQRGIVGNIVSRFETKGYHLVAMKTKMASKELLEEHYKDLVEKPFFPKLRDYMLSGPVVCMVWEGREAVSTGRKMLGATNPLESAPGTIRGDFCIEV 130

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BLAST of mRNA_Ecto-sp13_S_contig7560.18757.1 vs. uniprot
Match: A0A4P9X3G1_9FUNG (Nucleoside diphosphate kinase n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X3G1_9FUNG)

HSP 1 Score: 175 bits (444), Expect = 2.020e-53
Identity = 80/111 (72.07%), Postives = 97/111 (87.39%), Query Frame = 0

Query:   53 MAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV 163
            M+ ER+YIM+KPDGV+RGLVGKII+RFE+RGYKLA ++L +AD+ALL +HY DL +KPFFP+L+AYM SGPVV M WEGKD V  GR +LGETNPL SAPGTIRGDFC++V
Sbjct:    1 MSQERTYIMVKPDGVERGLVGKIISRFEQRGYKLAAIRLLKADQALLSQHYADLAEKPFFPRLMAYMTSGPVVGMVWEGKDAVRTGRTLLGETNPLNSAPGTIRGDFCIDV 111

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BLAST of mRNA_Ecto-sp13_S_contig7560.18757.1 vs. uniprot
Match: A0A7S3HYI0_9SPIT (Nucleoside diphosphate kinase (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3HYI0_9SPIT)

HSP 1 Score: 177 bits (448), Expect = 2.130e-53
Identity = 86/122 (70.49%), Postives = 100/122 (81.97%), Query Frame = 0

Query:   42 TIAPSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV 163
            T A +  S P MAMER+YIMIKPDGVQR LVG IITRFE+RGY+L  LKL QADE LL++HY DLV+KPFFPKLL+YM+SGPV CM W+G++ V MGR+MLG TNP  S PGTIRGDF +EV
Sbjct:   34 TPAVARASAPLMAMERTYIMIKPDGVQRNLVGNIITRFEQRGYQLCALKLFQADEDLLREHYCDLVEKPFFPKLLSYMLSGPVTCMVWKGENAVKMGRQMLGATNPQESLPGTIRGDFSIEV 155

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BLAST of mRNA_Ecto-sp13_S_contig7560.18757.1 vs. uniprot
Match: A0A0M0J7L5_9EUKA (Nucleoside diphosphate kinase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7L5_9EUKA)

HSP 1 Score: 176 bits (445), Expect = 4.880e-53
Identity = 86/116 (74.14%), Postives = 98/116 (84.48%), Query Frame = 0

Query:   53 MAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEVMTGRD 168
            MAMER+YIMIKPDGVQRGLVG+II RFE+RGYKL  LKL QA+E LL+KHY DL +KPFFP LL YM SGPV CM WEG++VV MGR+MLGETNP ASAPGTIRGDF   ++ GR+
Sbjct:   39 MAMERTYIMIKPDGVQRGLVGEIIKRFEQRGYKLGALKLYQANEDLLRKHYGDLQEKPFFPGLLKYMTSGPVTCMVWEGENVVRMGRQMLGETNPQASAPGTIRGDF--SIVVGRN 152

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BLAST of mRNA_Ecto-sp13_S_contig7560.18757.1 vs. uniprot
Match: A0A7S2YRX6_9STRA (Nucleoside diphosphate kinase n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX6_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.850e-52
Identity = 81/110 (73.64%), Postives = 93/110 (84.55%), Query Frame = 0

Query:   54 AMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV 163
            A ER+YIMIKPDGVQRGLVG I++RFE +GYKL  +K KQAD  LL++HY DLV+KPFFPKL  YM+SGPV CM WEGK+ V+ GRKMLG TNPL SAPGTIRGDFC+EV
Sbjct:   38 ASERTYIMIKPDGVQRGLVGNIVSRFETKGYKLVAMKTKQADADLLEQHYIDLVEKPFFPKLKEYMLSGPVCCMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEV 147

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BLAST of mRNA_Ecto-sp13_S_contig7560.18757.1 vs. uniprot
Match: A0A1Z5J7R9_FISSO (Nucleoside diphosphate kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7R9_FISSO)

HSP 1 Score: 174 bits (440), Expect = 2.550e-52
Identity = 82/119 (68.91%), Postives = 97/119 (81.51%), Query Frame = 0

Query:   45 PSAVSRPTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV 163
            P +V+  +MAMER+YIMIKPDGVQRG+VG II+RFE +GYKL  +K + A + LL+KHY DL  KPFFPKL  YM+SGPVV M WEGK+ V+ GRKMLG TNPL SAPGTIRGDFC+EV
Sbjct:   28 PRSVNSLSMAMERTYIMIKPDGVQRGIVGNIISRFETKGYKLVAMKTRMATKELLEKHYADLTSKPFFPKLRDYMLSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEV 146

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BLAST of mRNA_Ecto-sp13_S_contig7560.18757.1 vs. uniprot
Match: B7FPE8_PHATC (Nucleoside diphosphate kinase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPE8_PHATC)

HSP 1 Score: 172 bits (436), Expect = 3.540e-52
Identity = 80/110 (72.73%), Postives = 91/110 (82.73%), Query Frame = 0

Query:   54 AMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLKKHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLASAPGTIRGDFCLEV 163
            A ER+YIMIKPDG+QRG+VG I+ RFE +GYKL  +K KQA   LL+ HYKDLVDKPFFPKL  YM+SGPVV M WEGK+ V+ GRKMLG TNPL SAPGTIRGDFC+EV
Sbjct:    3 ASERTYIMIKPDGIQRGIVGNIVNRFETKGYKLVAMKTKQATSELLETHYKDLVDKPFFPKLKEYMMSGPVVSMVWEGKEAVSTGRKMLGATNPLESAPGTIRGDFCIEV 112

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig7560.18757.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig7560.18757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIL8_ECTSI	1.810e-105	97.55	Nucleoside diphosphate kinase n=2 Tax=Ectocarpus T...	[more]
A0A836CHD7_9STRA	2.410e-61	70.07	Nucleoside diphosphate kinase n=1 Tax=Tribonema mi...	[more]
A0A7S2EER7_TRICV	1.920e-55	63.46	Nucleoside diphosphate kinase n=1 Tax=Trieres chin...	[more]
A0A7R9VG66_9STRA	1.340e-53	70.09	Nucleoside diphosphate kinase n=1 Tax=Pseudictyota...	[more]
A0A4P9X3G1_9FUNG	2.020e-53	72.07	Nucleoside diphosphate kinase n=1 Tax=Caulochytriu...	[more]
A0A7S3HYI0_9SPIT	2.130e-53	70.49	Nucleoside diphosphate kinase (Fragment) n=2 Tax=C...	[more]
A0A0M0J7L5_9EUKA	4.880e-53	74.14	Nucleoside diphosphate kinase n=1 Tax=Chrysochromu...	[more]
A0A7S2YRX6_9STRA	1.850e-52	73.64	Nucleoside diphosphate kinase n=2 Tax=Amphiprora p...	[more]
A0A1Z5J7R9_FISSO	2.550e-52	68.91	Nucleoside diphosphate kinase n=2 Tax=Fistulifera ...	[more]
B7FPE8_PHATC	3.540e-52	72.73	Nucleoside diphosphate kinase n=2 Tax=Phaeodactylu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001564	Nucleoside diphosphate kinase	PRINTS	PR01243	NUCDPKINASE	coord: 58..80 score: 67.39 coord: 102..121 score: 51.05 coord: 122..139 score: 59.5 coord: 143..159 score: 72.01
IPR034907	Nucleoside diphosphate kinase-like domain	SMART	SM00562	ndk_5	coord: 55..168 e-value: 1.8E-47 score: 173.7
IPR034907	Nucleoside diphosphate kinase-like domain	PFAM	PF00334	NDK	coord: 56..163 e-value: 2.5E-38 score: 131.1
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	GENE3D	3.30.70.141		coord: 49..166 e-value: 1.6E-43 score: 150.1
IPR036850	Nucleoside diphosphate kinase-like domain superfamily	SUPERFAMILY	54919	Nucleoside diphosphate kinase, NDK	coord: 53..164
None	No IPR available	PANTHER	PTHR11349:SF44	NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC	coord: 39..167
None	No IPR available	PANTHER	PTHR11349	NUCLEOSIDE DIPHOSPHATE KINASE	coord: 39..167
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..168
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.874
None	No IPR available	TMHMM	TMhelix		coord: 7..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig7560	contig	Ecto-sp13_S_contig7560:3340..6492 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig7560.18757.1	mRNA_Ecto-sp13_S_contig7560.18757.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig7560 3340..6492 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig7560.18757.1 ID=prot_Ecto-sp13_S_contig7560.18757.1|Name=mRNA_Ecto-sp13_S_contig7560.18757.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=169bp
MMAKTLLCGLVAFLPAALGFVVPTASSSAFARGSGVAHVSATIAPSAVSR
PTMAMERSYIMIKPDGVQRGLVGKIITRFEERGYKLAGLKLKQADEALLK
KHYKDLVDKPFFPKLLAYMISGPVVCMAWEGKDVVAMGRKMLGETNPLAS
APGTIRGDFCLEVMTGRD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001564	Nucleoside_diP_kinase
IPR034907	NDK-like_dom
IPR036850	NDK-like_dom_sf