mRNA_Ecto-sp13_S_contig756.18756.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig756.18756.1 vs. uniprot
Match: D8LK14_ECTSI (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK14_ECTSI) HSP 1 Score: 931 bits (2406), Expect = 0.000e+0 Identity = 518/558 (92.83%), Postives = 519/558 (93.01%), Query Frame = 3
Query: 3 VVRSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLRLVPVVTKIDLHHANVEDAILSVATTFDLDPDDVIPTSAKTGEGVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVCLVEVVDGCLVEQDRVVPFHLKYGSGXXXXXXXXXXXXXXXXPSTSSETFSVQEVGLLTPAPTRTGALYPGQVGYIIAGMRSTRQATMGDTIIKAGASPPPSPLLIIEPSKSMLFASVYPLDDGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYCAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLSGGSXXXXXXXXXGR 1676
VVRSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGL+LVPVVTKIDLHHANVEDAILSVATTFDLDPDDVIPTSAKTGEGVDE GVVCLVEVVDGCLVEQDRVVPFHLKYGSGXXXXXXXXXXXXXXXX TSSETFSVQEVGLLTPAPTRTGALYPGQVGYIIAGMRSTRQATMGDTIIKAG SPPPSPLLIIEPSKSMLFASVYPLDDGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDY AAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLSGGSXXXXXXXXXGR
Sbjct: 147 VVRSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLKLVPVVTKIDLHHANVEDAILSVATTFDLDPDDVIPTSAKTGEGVDEVLGAIIERVPPPPRVVDPAAPLRARLVDSWYDTVRGVVCLVEVVDGCLVEQDRVVPFHLKYGSGXXXXXXXXXXXXXXXXXXTSSETFSVQEVGLLTPAPTRTGALYPGQVGYIIAGMRSTRQATMGDTIIKAGVSPPPSPLLIIEPSKSMLFASVYPLDDGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYSAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLSGGSXXXXXXXXXGR 704
BLAST of mRNA_Ecto-sp13_S_contig756.18756.1 vs. uniprot
Match: A0A6H5L112_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L112_9PHAE) HSP 1 Score: 596 bits (1537), Expect = 3.800e-206 Identity = 311/314 (99.04%), Postives = 311/314 (99.04%), Query Frame = 3
Query: 735 DGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYCAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLSGGSXXXXXXXXXGR 1676
DGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLD ERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYCAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLSGGS XXXXXXXGR
Sbjct: 9 DGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDDERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYCAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLSGGSGTXXXXXXXGR 322
BLAST of mRNA_Ecto-sp13_S_contig756.18756.1 vs. uniprot
Match: A0A836CD47_9STRA (Translation factor GUF1 homolog, mitochondrial n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD47_9STRA) HSP 1 Score: 569 bits (1467), Expect = 4.190e-192 Identity = 312/550 (56.73%), Postives = 387/550 (70.36%), Query Frame = 3
Query: 3 VVRSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLRLVPVVTKIDLHHANVEDAILSVATTFDLDPDDVIPTSAKTGEGVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVCLVEVVDGCLVEQDRVVPFHLKYGSGXXXXXXXXXXXXXXXXPSTSSETFSVQEVGLLTPAPTRTGALYPGQVGYIIAGMRSTRQATMGDTIIKAGA------SPPPSPLLIIEPSKSMLFASVYPLDDGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYCAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLS 1634
VVRSLS+CQGALLLVDATQGVQAQTL+T +AAQ AG++++PVVTKIDL +A VED I S+A TFDLDP+ V+ TSAKTG+G+D GVVCLV+ VDG L E DR+ HL G+ TFSVQEVGLLTPAP RT +L+ GQVGY+I G++S RQ +GDT+I+AG PP PL + P + LFAS +PLD DF +LL AVERLALNDA+++ RE S LG GLR+GFLG+LHMEVF QRL DEF+ VL+T P VPY + V + NL+DWP+ K+ G+ +VLEP+V+AT+ITP +CLG+MLTLL+++RG + K++DGERVLL YKLPWQEVV+DLHD+AK++SSGYAS Y +PE ADLV +++IN + V ALSFV HR + R GRD+A RLK+VI RQQFEVV+ A++GA+PFA+ERIPPYRKDVL+KSGK VGGGD SRK+KLLDKQK+GK RAKTVG+VQL Q AFWA+LS
Sbjct: 4 VVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGG-----------GDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPE-EKRRGVT-QVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLS 540
BLAST of mRNA_Ecto-sp13_S_contig756.18756.1 vs. uniprot
Match: A0A836CPP8_9STRA (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPP8_9STRA) HSP 1 Score: 569 bits (1467), Expect = 6.060e-190 Identity = 312/550 (56.73%), Postives = 387/550 (70.36%), Query Frame = 3
Query: 3 VVRSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLRLVPVVTKIDLHHANVEDAILSVATTFDLDPDDVIPTSAKTGEGVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVCLVEVVDGCLVEQDRVVPFHLKYGSGXXXXXXXXXXXXXXXXPSTSSETFSVQEVGLLTPAPTRTGALYPGQVGYIIAGMRSTRQATMGDTIIKAGA------SPPPSPLLIIEPSKSMLFASVYPLDDGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYCAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLS 1634
VVRSLS+CQGALLLVDATQGVQAQTL+T +AAQ AG++++PVVTKIDL +A VED I S+A TFDLDP+ V+ TSAKTG+G+D GVVCLV+ VDG L E DR+ HL G+ TFSVQEVGLLTPAP RT +L+ GQVGY+I G++S RQ +GDT+I+AG PP PL + P + LFAS +PLD DF +LL AVERLALNDA+++ RE S LG GLR+GFLG+LHMEVF QRL DEF+ VL+T P VPY + V + NL+DWP+ K+ G+ +VLEP+V+AT+ITP +CLG+MLTLL+++RG + K++DGERVLL YKLPWQEVV+DLHD+AK++SSGYAS Y +PE ADLV +++IN + V ALSFV HR + R GRD+A RLK+VI RQQFEVV+ A++GA+PFA+ERIPPYRKDVL+KSGK VGGGD SRK+KLLDKQK+GK RAKTVG+VQL Q AFWA+LS
Sbjct: 152 VVRSLSSCQGALLLVDATQGVQAQTLTTFRAAQEAGIKVLPVVTKIDLPNAQVEDTIFSMAATFDLDPEHVLATSAKTGQGIDAVLETIVKHVPPPPSEWDAAAPLRARVLDSWYDPLRGVVCLVQCVDGVLAEGDRISTCHLMSGAAAAGAGQGG-----------GDTTFSVQEVGLLTPAPVRTRSLWSGQVGYMIGGIKSVRQVLLGDTVIRAGTRKGASDEAPPPPLPLFAPCRPNLFASCFPLDGDDFATLLTAVERLALNDASLQVHRENSTMLGHGLRVGFLGLLHMEVFKQRLDDEFNMAVLVTAPNVPYIFRDRDTGAEVEIENLADWPE-EKRRGVT-QVLEPMVEATVITPEDCLGSMLTLLQDKRGTELDTKFIDGERVLLVYKLPWQEVVTDLHDKAKSISSGYASLTYRPIDPEPADLVLCEMAINTEVVGALSFVSHRSSVMRLGRDLAARLKKVIPRQQFEVVIQARLGAKPFARERIPPYRKDVLIKSGKTVGGGDPSRKRKLLDKQKEGKRRAKTVGKVQLPQSAFWALLS 688
BLAST of mRNA_Ecto-sp13_S_contig756.18756.1 vs. uniprot
Match: W7TE65_9STRA (Translation factor GUF1 homolog, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TE65_9STRA) HSP 1 Score: 514 bits (1325), Expect = 1.070e-168 Identity = 305/561 (54.37%), Postives = 371/561 (66.13%), Query Frame = 3
Query: 3 VVRSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLRLVPVVTKIDLHHANVEDAILSVATTFDLDPDDVIPTSAKTGEGVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVCLVEVVDGCLVEQDRVVPFHLKYGSGXXXXXXXXXXXXXXXXPSTSSETFSVQEVGLLTPAPTRTGALYPGQVGYIIAGMRSTRQATMGDTII----------KAGASPPPSPLLIIEPSKSMLFASVYPLDDGDFDSLLRAVERLALNDAAIEWEREQS-PALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQI---QPSGGRDPVTVIN-LSDWPDPSKKDGLK-FKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYCAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLM-KSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLS 1634
V RSLSACQGALLLVDATQG+QAQTLST AQ A L ++PVVTK DL HA +D L +ATTFD+D +DV+ TSAKTG+GV GVVCLV+VVDG + E DR+ L + E+FSVQEVG+L P RTG+L GQVGY+IAGMRSTRQA MGDTI +AG P P E +KSMLFAS+YPLD DFDSL AV +L LNDA++ +RE S +LG GLR GFLG+LHMEVF+QRL DEF T VLLT+PTVPY+I Q G V VI L+DWPDP+ + K+ EPVV+ATI+TP +GA+ T LK RRG Q +KYLD + V+L Y+LPWQEVV+DLHD K VS+GYAS +Y A + DLVKV++++NG+ VDALSFVCHR A+R+GR VA +LK VIDRQ FE+ + AK+G + A+ER+ PYRKDVL+ K+GK VGGGD +RKKKLL+KQK+GK RAK VG+V LSQEAFWAV+S
Sbjct: 158 VSRSLSACQGALLLVDATQGIQAQTLSTYAFAQEAKLSIIPVVTKSDLPHAQTDDVTLQMATTFDMDLEDVLVTSAKTGQGV--HAILPAVIDRISAPGGDPTAPLRARLIDSWYDPTRGVVCLVQVVDGSIKENDRISAHSL-----------------------AAFESFSVQEVGVLCPYQLRTGSLLTGQVGYVIAGMRSTRQAKMGDTIYHHQKGAAEAAEAGVDPLPG----FETAKSMLFASIYPLDTQDFDSLELAVNKLTLNDASVTVQREGSNTSLGSGLRCGFLGLLHMEVFNQRLRDEFGTAVLLTSPTVPYRIIHSQKEGETAEVKVIQTLADWPDPATTPNYRDLKIEEPVVEATILTPVTSVGAITTCLKERRGVQEDVKYLDDKNVVLTYRLPWQEVVTDLHDVVKNVSAGYASLNYKEAGYASDDLVKVELALNGEEVDALSFVCHRTKAEREGRRVALKLKNVIDRQNFEINIQAKVGRKVVARERVAPYRKDVLVTKAGKNVGGGDVTRKKKLLEKQKQGKKRAKMVGKVSLSQEAFWAVIS 689
BLAST of mRNA_Ecto-sp13_S_contig756.18756.1 vs. uniprot
Match: A0A5D6XXH5_9STRA (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH5_9STRA) HSP 1 Score: 474 bits (1219), Expect = 7.260e-154 Identity = 268/542 (49.45%), Postives = 352/542 (64.94%), Query Frame = 3
Query: 9 RSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLRLVPVVTKIDLHHANVEDAILSVATTFDLDPDDVIPTSAKTGEGVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVCLVEVVDGCLVEQDRVVPFHLKYGSGXXXXXXXXXXXXXXXXPSTSSETFSVQEVGLLTPAPTRTGALYPGQVGYIIAGMRSTRQATMGDTIIKAGASPPPSPLLIIEPSKSMLFASVYPLDDGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYCAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLS 1634
RSLSAC+G LLLVD +QG+QAQTL+T AA+ GL +VPV+TKID+ HA ED+ILS+++ D+DPD V+ TSAK+G G+ G+VCLV+VVDG L DR+V H TF VQE G+L P +T L+ GQVGYIIAGM++T +A +GDT + A P +PL + +KSM+FAS+YP DD F+ L A+E+L LNDA++ + E S ALGMG R GFLG+LHMEVFHQRL DE + VL+T P VPY + + V +P+ +K VLEP+V+A+IITPTE LG +L+L K++RG QT++ YL+ RV+L +PWQEVV++ +++ KT+SSGYA+ +Y EP+ AD+VKVDI ING +DALSFVCHR A + GR + +LK+VIDRQQ+E+ + A +G + FAKERIPPYRKDVL+KSGK VGGGD++RKKKLL KQK GK R KTV VQLSQ+AFW+V+S
Sbjct: 109 RSLSACEGVLLLVDCSQGIQAQTLATYYAAKERGLHVVPVLTKIDMPHAQPEDSILSLSSLLDVDPDSVLLTSAKSGAGI--LDVLPAVIARLPPPPSDPSAPLRCLLVDSYYDDYRGIVCLVKVVDGSLAPGDRIVSSH-------------------------QQSTFEVQETGVLLPHRFKTPGLHAGQVGYIIAGMKTTTEAKVGDTFFREHA--PVAPLPGFQEAKSMVFASMYPTDDCSFEDLRVAIEKLTLNDASVTAQVETSGALGMGYRCGFLGLLHMEVFHQRLADEQNMQVLVTAPMVPYTLVDAATGVAEVVETPGSFPESTKY----VDVLEPIVEASIITPTEFLGPILSLAKDKRGVQTNLVYLEDGRVILTLDVPWQEVVTNFYNELKTISSGYATLNYREVEPQKADIVKVDILINGKVLDALSFVCHRSKATQDGRALCLKLKKVIDRQQYEIAIQACLGGKVFAKERIPPYRKDVLIKSGKTVGGGDATRKKKLLAKQKDGKRRMKTVSNVQLSQDAFWSVMS 617
BLAST of mRNA_Ecto-sp13_S_contig756.18756.1 vs. uniprot
Match: A0A2D4BHP8_PYTIN (Translation factor GUF1 homolog, mitochondrial n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHP8_PYTIN) HSP 1 Score: 474 bits (1220), Expect = 3.360e-153 Identity = 266/544 (48.90%), Postives = 361/544 (66.36%), Query Frame = 3
Query: 3 VVRSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLRLVPVVTKIDLHHANVEDAILSVATTFDLDPDDVIPTSAKTGEGVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVCLVEVVDGCLVEQDRVVPFHLKYGSGXXXXXXXXXXXXXXXXPSTSSETFSVQEVGLLTPAPTRTGALYPGQVGYIIAGMRSTRQATMGDTIIKAGASPPPSPLLIIEPSKSMLFASVYPLDDGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYCAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLS 1634
V RSLSAC+G LLLVD +QG+QAQTL+T AA+ GLR+VPV+TKID+ HA ++ ILS+++ DLDPDDV+ TSAK+G GV + G++CLV++VDG + D++V H + + VQE G+L P +T L+ GQVGY+IAGM++T +A +GDT + A P +PL + ++SM+FAS+YP DD FD L A+E+L LNDA++ ++E S ALGMG R GFLG+LHMEVFHQRL DE + VL+T P VPY++ G + V V + +PD +K +LEP+V+A+IITP+E LG +L+L K +RG Q ++ YL+ RV+L +PWQEVV++ +++ KTVSSGYA+ +Y EP+ AD+VKVDI ING +DALSFVCHR A +GR + +LK+VIDRQQ+E+ + A +G++ FAKERIPP+RKDVL+KSGK+VGGGDS+RKKKLL KQK+GK R KTV VQLSQ+AFW+VLS
Sbjct: 168 VSRSLSACEGVLLLVDCSQGIQAQTLATYYAAKERGLRVVPVLTKIDMPHAQPDECILSLSSLLDLDPDDVLLTSAKSGIGVPDVLPAVIARLPPPTADPAAPLKCLLVDSYYDDYR--GIICLVKIVDGTIKPGDKIVSSH-------------------------QNTKYEVQETGVLLPHRHKTNGLHAGQVGYVIAGMKTTSEAKIGDTFFREHA--PVAPLPGFQEARSMVFASLYPTDDXTFDDLRTAIEKLTLNDASVTAQQETSGALGMGFRCGFLGLLHMEVFHQRLADEQNVQVLVTAPMVPYRVINPQGVESV-VETPASFPDSTKY----XTILEPMVEASIITPSEYLGGILSLTKEKRGVQKNLVYLEDGRVVLSIDVPWQEVVTNFYNELKTVSSGYATLNYREIEPQQADIVKVDILINGKVLDALSFVCHRSKATTEGRALCVKLKKVIDRQQYEISIQAALGSKVFAKERIPPFRKDVLIKSGKVVGGGDSTRKKKLLAKQKEGKRRMKTVSNVQLSQDAFWSVLS 677
BLAST of mRNA_Ecto-sp13_S_contig756.18756.1 vs. uniprot
Match: A0A8K1C3F0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3F0_PYTOL) HSP 1 Score: 470 bits (1210), Expect = 1.000e-151 Identity = 264/544 (48.53%), Postives = 364/544 (66.91%), Query Frame = 3
Query: 3 VVRSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLRLVPVVTKIDLHHANVEDAILSVATTFDLDPDDVIPTSAKTGEGVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVCLVEVVDGCLVEQDRVVPFHLKYGSGXXXXXXXXXXXXXXXXPSTSSETFSVQEVGLLTPAPTRTGALYPGQVGYIIAGMRSTRQATMGDTIIKAGASPPPSPLLIIEPSKSMLFASVYPLDDGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYCAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLS 1634
V RSLSAC+G LLLVD +QG+QAQTL+T AA+ GL++VPV+TKID+ HA +D+ILS+++ D+DPDDV+ TSAK+G G+D+ GV+CLV+V DG + D+++ HLK + VQE G+L P +T L+ GQVGY+IAGM++T +A +GDT + A P +PL + ++SM+FAS+YP D+ F+ L A+E+L LNDA++ ++E S ALGMG R GFLG+LHMEVFHQRL DE + VL+T P VPY + G++ V V +PD +K +++LEP+V+A+IITP + LGA+L+L K++RG QT++ YL+ RV++ +PWQEVV++ +++ KT+SSGYA+ +Y E + AD+VKVDI ING +DALSFVCHR A +GR + +LK+VIDRQQ+E+ + A +GA+ FAKERI PYRKDVL+KSGK+VGGGDS+RKKKLL KQK+GK R KTV VQLSQ+AFW+VLS
Sbjct: 167 VSRSLSACEGVLLLVDCSQGIQAQTLATYYAAKERGLKVVPVLTKIDMPHAQPDDSILSLSSLLDVDPDDVLLTSAKSGIGIDDVLPAVIKRLPPPTADIDAPLKCLLVDSYYDDYR--GVICLVKVFDGSIRPGDKILSSHLK-------------------------TKYEVQETGVLLPHRHKTPGLHAGQVGYVIAGMKTTSEAKIGDTFYREHA--PVAPLPGFQEARSMVFASMYPTDECTFEDLRSAIEKLTLNDASVTAQQETSGALGMGFRCGFLGLLHMEVFHQRLSDEQNVQVLVTAPMVPYTVIDPQGKESV-VETPGAFPDSTKY----YRILEPMVEASIITPVDYLGAILSLAKDKRGVQTNLVYLEDGRVVVTIDVPWQEVVTNFYNELKTISSGYATLNYREIEAQQADIVKVDILINGKVLDALSFVCHRSKATVEGRALCVKLKKVIDRQQYEISIQASLGAKIFAKERIAPYRKDVLVKSGKVVGGGDSTRKKKLLAKQKEGKRRMKTVSNVQLSQDAFWSVLS 676
BLAST of mRNA_Ecto-sp13_S_contig756.18756.1 vs. uniprot
Match: A0A067CRD4_SAPPC (Translation factor GUF1 homolog, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CRD4_SAPPC) HSP 1 Score: 467 bits (1201), Expect = 7.020e-151 Identity = 267/544 (49.08%), Postives = 351/544 (64.52%), Query Frame = 3
Query: 3 VVRSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLRLVPVVTKIDLHHANVEDAILSVATTFDLDPDDVIPTSAKTGEGVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVCLVEVVDGCLVEQDRVVPFHLKYGSGXXXXXXXXXXXXXXXXPSTSSETFSVQEVGLLTPAPTRTGALYPGQVGYIIAGMRSTRQATMGDTIIKAGASPPPSPLLIIEPSKSMLFASVYPLDDGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYCAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLS 1634
V RSLSAC+G LLLVDA+QG+QAQTL+T AA+ GLR+VP++TKID+ HA E+ +LS++ D+DP+ V+ TSAK+G G+DE G+VCLV+VVDGCL ++V + + ++ VQEVG+L P T LY GQVGYIIAGM++T +A +GDT G P L + +KSM+FAS+YP D+ FD L A+ +L LNDA++ + E S ALGMG R GFLG+LHMEVFHQRL DE + VL+T P VPY + + G V ++P+ +K ++V EP+V+A+IITP E +GA+L RRG QT++ YLD RV L ++LPWQEVV+D +++ KTV+SGYAS +Y EP+ AD+VKVD+ ING +DALSFVCHR A GR + +LK VIDRQQ+E+ + A +GA+ FAKERIPP+RKDVL+KSGK VGGGD +RK+KLL KQK+GK R KTVG VQLSQ AFW+VLS
Sbjct: 130 VSRSLSACEGVLLLVDASQGIQAQTLATYHAAKDLGLRVVPILTKIDMPHAQPEEGMLSLSALLDVDPESVLLTSAKSGVGIDEVLPAVIEYLPPPIANRSAPLKCLLVDSYYDDYR--GIVCLVKVVDGCLAPGEKVTS-------------------------AATKTSYDVQEVGVLLPHRFPTKGLYAGQVGYIIAGMKTTTEARVGDTFHHPGK--PVEALPGFQEAKSMVFASMYPTDECTFDDLRTAMGKLTLNDASVTSQVENSGALGMGYRCGFLGLLHMEVFHQRLSDEQNMQVLVTAPMVPYTVIDANGER-TKVETPGEFPESTKY----YRVEEPMVEASIITPAEYVGAILISTNERRGEQTNMVYLDDSRVALTFRLPWQEVVTDFYNELKTVTSGYASLNYREIEPQEADIVKVDVLINGKILDALSFVCHRSKATAAGRALCLKLKNVIDRQQYEINIQATLGAKIFAKERIPPFRKDVLIKSGKQVGGGDITRKQKLLKKQKEGKKRMKTVGNVQLSQNAFWSVLS 639
BLAST of mRNA_Ecto-sp13_S_contig756.18756.1 vs. uniprot
Match: GUF1_PHYIT (Translation factor GUF1 homolog, mitochondrial n=14 Tax=Peronosporaceae TaxID=4777 RepID=GUF1_PHYIT) HSP 1 Score: 466 bits (1200), Expect = 1.630e-150 Identity = 261/543 (48.07%), Postives = 352/543 (64.83%), Query Frame = 3
Query: 9 RSLSACQGALLLVDATQGVQAQTLSTAKAAQAAGLRLVPVVTKIDLHHANVEDAILSVATTFDLDPDDVIPTSAKTGEGVDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVCLVEVVDGCLVEQDRVVPFHLKYGSGXXXXXXXXXXXXXXXXPSTSSETFSVQEVGLLTPAPTRTGALYPGQVGYIIAGMRSTRQATMGDTIIKAGASPPPSPLLI-IEPSKSMLFASVYPLDDGDFDSLLRAVERLALNDAAIEWEREQSPALGMGLRMGFLGVLHMEVFHQRLVDEFDTPVLLTTPTVPYQIQPSGGRDPVTVINLSDWPDPSKKDGLKFKVLEPVVDATIITPTECLGAMLTLLKNRRGRQTSIKYLDGERVLLEYKLPWQEVVSDLHDQAKTVSSGYASFDYCAAEPEAADLVKVDISINGDSVDALSFVCHRDAAQRKGRDVARRLKEVIDRQQFEVVVHAKMGARPFAKERIPPYRKDVLMKSGKLVGGGDSSRKKKLLDKQKKGKARAKTVGRVQLSQEAFWAVLS 1634
RSLSAC+G LLLVD +QG+QAQTL+T AA+ L +VPV+TKID+ HA V+D+ILS+++ D+DPD+V+ TSAK+G+G+++ G VCLV+VVDG + D++ H K VQE GLL P +T LY GQVGYIIAGM+ST +A +GDT + GA+ L + ++SM+FAS+YP DD FD L A+E+L LNDA++ ++E S ALGMG R GFLG+LHMEVFHQRL DE V++T P VPY + G +TV +P+ +K +++LEP+V+A+IITP LG +L L K +RG QT++ YL+ ER+++ +PWQEVV++ +++ KT+SSGYA+ +Y EP+ AD+VKVD+ ING +DALSFVCHR A GR + ++LK VIDRQQ+E+ + A +G + FAKERI PYRKDVL+KSGK VGGGDS+RKKKLL KQK+GK R +TV VQLSQ+AFW+VLS
Sbjct: 144 RSLSACEGVLLLVDCSQGIQAQTLATYYAAKERNLHVVPVLTKIDMPHAEVDDSILSLSSLLDVDPDEVLLTSAKSGDGINDVLPAVVERLPPPVECDPAAPLRCLLVDSYYDDYR-GTVCLVKVVDGAISPGDKIYSAHQK-------------------------TKHDVQETGLLLPGRYKTKGLYAGQVGYIIAGMKSTTEAKVGDTFFREGAASADLKALPGFQEARSMVFASMYPTDDSSFDELRVAIEKLTLNDASVTAQQETSGALGMGFRCGFLGLLHMEVFHQRLSDEQGIQVMVTAPMVPYTVIDPNGEH-LTVETPGAFPESTKY----YEILEPMVEASIITPASYLGPVLALAKEKRGVQTNLVYLEDERIIVTIDVPWQEVVTNFYNELKTISSGYATLNYREIEPQKADIVKVDLLINGKVLDALSFVCHRSRATPDGRALCQKLKRVIDRQQYEISIQAALGGKIFAKERIAPYRKDVLIKSGKTVGGGDSTRKKKLLAKQKQGKRRMRTVANVQLSQDAFWSVLS 655 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig756.18756.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig756.18756.1 >prot_Ecto-sp13_S_contig756.18756.1 ID=prot_Ecto-sp13_S_contig756.18756.1|Name=mRNA_Ecto-sp13_S_contig756.18756.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=358bp MRSTRQATMGDTIIKAGASPPPSPLLIIEPSKSMLFASVYPLDDGDFDSLback to top mRNA from alignment at Ecto-sp13_S_contig756:12273..21818- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig756.18756.1 ID=mRNA_Ecto-sp13_S_contig756.18756.1|Name=mRNA_Ecto-sp13_S_contig756.18756.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9546bp|location=Sequence derived from alignment at Ecto-sp13_S_contig756:12273..21818- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig756:12273..21818- >mRNA_Ecto-sp13_S_contig756.18756.1 ID=mRNA_Ecto-sp13_S_contig756.18756.1|Name=mRNA_Ecto-sp13_S_contig756.18756.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1074bp|location=Sequence derived from alignment at Ecto-sp13_S_contig756:12273..21818- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |