mRNA_Ecto-sp13_S_contig75561.18751.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig75561.18751.1 vs. uniprot
Match: A0A498LK61_LABRO (Zinc finger BED domain-containing 1-like protein n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498LK61_LABRO) HSP 1 Score: 75.5 bits (184), Expect = 1.890e-15 Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 PLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLIMTDKRSRLTDDNAENHIFLSSKGTL 201
PLKWWK E YP LSKLA R+LAVQATS ASER+FSTA I+T +R+ L+ +N + IFL L
Sbjct: 109 PLKWWKDNENQYPNLSKLAKRYLAVQATSVASERVFSTAGDIVTSQRAALSTENVDILIFLKKNMKL 175
BLAST of mRNA_Ecto-sp13_S_contig75561.18751.1 vs. uniprot
Match: A0A815D159_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815D159_9BILA) HSP 1 Score: 77.8 bits (190), Expect = 3.860e-15 Identity = 38/67 (56.72%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 4 LKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLIMTDKRSRLTDDNAENHIFLSSKGTLW 204
L+WWK K+ YP LS+LA ++L++Q++SA SER+FSTA LI +D+RSRLT DNA+ IFL+ K W
Sbjct: 534 LEWWKSKQTKYPVLSELARKYLSIQSSSAPSERIFSTAGLITSDRRSRLTPDNADTIIFLN-KNMNW 599
BLAST of mRNA_Ecto-sp13_S_contig75561.18751.1 vs. uniprot
Match: A0A7T8H2B9_CALRO (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Caligus rogercresseyi TaxID=217165 RepID=A0A7T8H2B9_CALRO) HSP 1 Score: 74.7 bits (182), Expect = 4.670e-14 Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 PLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLIMTDKRSRLTDDNAENHIFL 183
PL WW YP LSKLAF++L+VQATS +SERLFSTA I+ D+R+RL++ NAE I L
Sbjct: 496 PLLWWHSNRMKYPLLSKLAFKYLSVQATSVSSERLFSTAGQILNDRRNRLSESNAEKMIIL 556
BLAST of mRNA_Ecto-sp13_S_contig75561.18751.1 vs. uniprot
Match: A0A1X7SKD3_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SKD3_AMPQE) HSP 1 Score: 70.9 bits (172), Expect = 5.430e-14 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 1 PLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLIMTDKRSRLTDDNAENHIFLS 186
PL+WWK E +PT++++A R+L V ATS SER+FS A L++ +KRS LT +NA+ IFLS
Sbjct: 75 PLEWWKANESRFPTIARIARRYLCVPATSVPSERVFSAAGLVINNKRSSLTPENADMLIFLS 136
BLAST of mRNA_Ecto-sp13_S_contig75561.18751.1 vs. uniprot
Match: A0A8C2FYL1_CYPCA (BED-type domain-containing protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2FYL1_CYPCA) HSP 1 Score: 73.6 bits (179), Expect = 1.200e-13 Identity = 38/61 (62.30%), Postives = 46/61 (75.41%), Query Frame = 1
Query: 1 PLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLIMTDKRSRLTDDNAENHIFL 183
PLKWWK E YP LSKLA R+LAVQATS ASER+FSTA I+T +R+ L+ +N + IFL
Sbjct: 567 PLKWWKDNEHQYPHLSKLAKRYLAVQATSVASERVFSTAGDIVTAQRAALSPENVDILIFL 627
BLAST of mRNA_Ecto-sp13_S_contig75561.18751.1 vs. uniprot
Match: A0A3B1JJI0_ASTMX (Zinc finger BED domain-containing protein 1-like n=2 Tax=Clupeocephala TaxID=186625 RepID=A0A3B1JJI0_ASTMX) HSP 1 Score: 72.8 bits (177), Expect = 2.230e-13 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 PLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLIMTDKRSRLTDDNAENHIFL 183
PLKWWK E YP LSKL+ +LAVQATS ASER+FSTA I+T +R+ L+ DN + IFL
Sbjct: 564 PLKWWKNNEHQYPNLSKLSKHYLAVQATSVASERVFSTAGDIVTAQRAALSPDNVDILIFL 624
BLAST of mRNA_Ecto-sp13_S_contig75561.18751.1 vs. uniprot
Match: UPI001C59CA0C (zinc finger BED domain-containing protein 4-like n=1 Tax=Cyprinus carpio TaxID=7962 RepID=UPI001C59CA0C) HSP 1 Score: 71.6 bits (174), Expect = 3.700e-13 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 PLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLIMTDKRSRLTDDNAENHIFL 183
PLKWWK E YP LSKLA +LAVQATS ASER+FSTA I+T +R+ L+ +N + IFL
Sbjct: 251 PLKWWKDNEHQYPHLSKLAKHYLAVQATSVASERVFSTAGDIVTAQRAALSPENVDILIFL 311
BLAST of mRNA_Ecto-sp13_S_contig75561.18751.1 vs. uniprot
Match: J9LJT7_ACYPI (BED-type domain-containing protein n=2 Tax=Macrosiphini TaxID=33386 RepID=J9LJT7_ACYPI) HSP 1 Score: 71.2 bits (173), Expect = 7.780e-13 Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 1 PLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLIMTDKRSRLTDDNAENHIFLSS 189
PLKWW +YP L+ LA +FL +QATS ASER+FS LI+TD R+ LT+D+A +FLS+
Sbjct: 573 PLKWWNLNSSMYPFLTILARKFLTIQATSVASERVFSKGGLIVTDHRATLTNDHASQLVFLSA 635
BLAST of mRNA_Ecto-sp13_S_contig75561.18751.1 vs. uniprot
Match: A0A8H3QI86_9GLOM (Zinc finger BED domain-containing protein 1-like n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A8H3QI86_9GLOM) HSP 1 Score: 70.1 bits (170), Expect = 8.390e-13 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 PLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLIMTDKRSRLTDDNAENHIFLSSKGTL 201
PLKWW + YP L+ +A ++L++QATS ASER+FS A+LIM+ KR+R+ +D E IFL G L
Sbjct: 185 PLKWWDVNKVQYPILAHMARKYLSIQATSGASERVFSDARLIMSAKRTRMKEDLFEALIFLKRNGNL 251
BLAST of mRNA_Ecto-sp13_S_contig75561.18751.1 vs. uniprot
Match: A0A1X7T780_AMPQE (BED-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7T780_AMPQE) HSP 1 Score: 70.9 bits (172), Expect = 1.060e-12 Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 1 PLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLIMTDKRSRLTDDNAENHIFLS 186
PL+WWK E +PT++++A R+L V ATS SER+FS A L++ +KRS LT +NA+ IFLS
Sbjct: 528 PLEWWKANESRFPTIARIARRYLCVPATSVPSERVFSAAGLVINNKRSSLTPENADMLIFLS 589 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig75561.18751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig75561.18751.1 >prot_Ecto-sp13_S_contig75561.18751.1 ID=prot_Ecto-sp13_S_contig75561.18751.1|Name=mRNA_Ecto-sp13_S_contig75561.18751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=69bp PLKWWKQKEELYPTLSKLAFRFLAVQATSAASERLFSTAKLIMTDKRSRLback to top mRNA from alignment at Ecto-sp13_S_contig75561:421..627- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig75561.18751.1 ID=mRNA_Ecto-sp13_S_contig75561.18751.1|Name=mRNA_Ecto-sp13_S_contig75561.18751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=207bp|location=Sequence derived from alignment at Ecto-sp13_S_contig75561:421..627- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig75561:421..627- >mRNA_Ecto-sp13_S_contig75561.18751.1 ID=mRNA_Ecto-sp13_S_contig75561.18751.1|Name=mRNA_Ecto-sp13_S_contig75561.18751.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=207bp|location=Sequence derived from alignment at Ecto-sp13_S_contig75561:421..627- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |