prot_Ecto-sp13_S_contig7554.18748.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7554.18748.1
Unique Nameprot_Ecto-sp13_S_contig7554.18748.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length319
Homology
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: D8LMD8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD8_ECTSI)

HSP 1 Score: 538 bits (1385), Expect = 3.730e-192
Identity = 256/281 (91.10%), Postives = 265/281 (94.31%), Query Frame = 0
Query:   38 MLFKDEHELTSMAVDPHGTKPFPDCRASRSNDASNGTLPEHQTPKYVKCPTPDTNGPGATSIVFEGQRGGRCCPCLWFENLLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLWTFVACFVIGPLEPRRDSRPGTWGED 318
            MLFKDE E  SMAV P  TKPFPDCRASRSN ASNG LP+HQTPKYVKCPT DTNGPG TSIVFEGQRGG CCPCLWFE LLGRYA+ELE+RPLIWKC TSALVGALGDVISQGVYWAIRGGRANAVWHDTNA+RQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEES+AYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSF+QEIIRTIEDDY  LVFWLVVIGLALAPLQVYTFNR+PVKWRVLISDG+DVLWTFVACFVIGPLEPRRDS PGTWGE+
Sbjct:    1 MLFKDEQEPRSMAVVPPNTKPFPDCRASRSNAASNGKLPQHQTPKYVKCPTSDTNGPGVTSIVFEGQRGGGCCPCLWFEKLLGRYAEELEKRPLIWKCATSALVGALGDVISQGVYWAIRGGRANAVWHDTNAVRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESKAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFSQEIIRTIEDDYVTLVFWLVVIGLALAPLQVYTFNRFPVKWRVLISDGMDVLWTFVACFVIGPLEPRRDSSPGTWGEE 281          
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: D8LMD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD9_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 5.950e-46
Identity = 82/175 (46.86%), Postives = 116/175 (66.29%), Query Frame = 0
Query:  123 ADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLWTFVA 297
            A  L+  P++ K ++S  +G LGDV++Q V +    G A   W  T  + +S AV IDG  ++ PLLH AY  L+  +PA +S   A+ QV VDVLV+DP+F  +F+ +TGL+EGRS   EI+ TI   Y  LV WL+VIG+  AP+Q+Y FNRYPV++RVL +D ID++WT V+
Sbjct:    7 ASALDAYPVLTKSISSGFIGLLGDVLAQWVEYLF--GAAFPPWKTTAMVWRSCAVMIDGLLINGPLLHYAYEMLESRMPAGDSILAAMTQVCVDVLVIDPVFAFMFVWSTGLIEGRSVRGEILPTIVHHYPTLVLWLIVIGVGWAPIQIYLFNRYPVQYRVLTADLIDLVWTCVS 179          
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: D7G2D0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D0_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 2.050e-38
Identity = 63/132 (47.73%), Postives = 94/132 (71.21%), Query Frame = 0
Query:  170 ALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLWTFVACFVI 301
            A+ ++ AVAI  F   AP LH+ Y AL++W+PA++S+A A+AQV +D LV++   GL F+V  G LEG ++ ++I+ TI+ DY  LV WL+V  + + P QVY F  +P+KWRVLI+DG  +LW F+ACF++
Sbjct:    3 AVWETWAVAIYCFFFVAPFLHVVYDALEKWIPADKSQANAIAQVTIDSLVVETFLGLTFIVMVGFLEGETWEEDIVPTIKSDYLTLVVWLMVTNMVMGPAQVYLFVHFPLKWRVLIADGKGLLWNFIACFIV 134          
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: A0A7S0GF40_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GF40_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.250e-14
Identity = 38/135 (28.15%), Postives = 73/135 (54.07%), Query Frame = 0
Query:  171 LRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESE-----AYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLWTFVACFV 300
            LR++  + +DGF +S P++H AY   +  +P  E+      A A+  +  D+ VLD  F    MV++GL+EG  F ++I+  +  DY       + + + L+P + + F   P+++R ++ +  D++W  V  F+
Sbjct:   16 LRRAFGMFLDGFVISGPIMHAAYDYFEHIIPTTENNLISPSAAAMLHMFGDIFVLDAFFVASDMVSSGLMEGYGFYEDIVPQLRSDYFTSYKTSIAMSIGLSPFEFFCFRFLPLRFRSIMMNFTDIIWCSVMSFM 150          
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: UPI001B7EE91C (peroxisomal membrane protein 2-like n=4 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7EE91C)

HSP 1 Score: 79.7 bits (195), Expect = 3.880e-14
Identity = 54/181 (29.83%), Postives = 92/181 (50.83%), Query Frame = 0
Query:  114 WFENLLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVF-WLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLW 293
            +++ LL +Y   L++ P++ K VTS ++ ALG+++SQG+    +G             R     A+ G CV+ P+ H  Y  L+ ++P+  S    L ++L+D LV  P F L+F +    LEG+S+     R   + ++AL   W V       P Q    N  PV++RVL ++ + + W
Sbjct:   13 FYQRLLQQYLLLLKKYPILTKSVTSGILSALGNLLSQGLQRRGKGSNLGKGLEWGGPAR----FAVYGLCVTGPVSHYFYQCLELFVPSSASHCI-LKRLLLDRLVFSPAFLLVFFLAMNFLEGKSWAAFQKRVKTEYWSALKMNWKVW-----TPFQFININYVPVQFRVLFANLVALFW 183          
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: V4C7Q2_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4C7Q2_LOTGI)

HSP 1 Score: 77.8 bits (190), Expect = 1.900e-13
Identity = 50/186 (26.88%), Postives = 93/186 (50.00%), Query Frame = 0
Query:  115 FENLLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVFWLVVIGLALAPLQVYTFNRY------PVKWRVLISDGIDVLWT 294
            FE LL  Y D L+R+P++ K V+S+++ A+G+++SQ +     G     VW      R + A +      + PLLH  +  LD  +P ++ +  A+ +V+ D  +  P +  +++    LLEG   +    R  E      V+W+++        +++TF +Y      P K+RVL  + + ++WT
Sbjct:   12 FEKLLREYNDLLQRKPVLTKAVSSSIISAVGNILSQ-LLAPHAGSGGKIVW------RSTFAYSCFALMFNGPLLHFFHQYLDNVVPKKKDKTSAMKRVIFDRFIFAPPYLFIYLYVIALLEGHGTSGAKQRIKE------VYWMLLQ----LNWKIWTFVQYFNLTYVPAKYRVLFGNLVSLIWT 180          
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: A0A7D9NK33_XENTR (Peroxisomal membrane protein 2 n=4 Tax=Xenopus TaxID=8353 RepID=A0A7D9NK33_XENTR)

HSP 1 Score: 77.8 bits (190), Expect = 1.980e-13
Identity = 56/178 (31.46%), Postives = 91/178 (51.12%), Query Frame = 0
Query:  118 LLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDY--AALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLW 293
            LL RY   L  RP++ K +TSA++ ALG+++SQ     I+  R          LR  L  A+ G   + PL H  Y  L++ +P+    A  L ++L++ L++ P F LLF +   LLEG++F + + + ++  Y  A  + W V       P Q    N  PV++RVL ++ +   W
Sbjct:   18 LLLRYLQLLHSRPVLTKALTSAILSALGNILSQ----TIQKWRKEQKHPQNVDLRGPLRFAVYGLLFTGPLSHYFYLLLEQLVPSSAPLA-GLQRLLIERLIIAPAFLLLFFLVMNLLEGKNFTK-LNQKLKSSYWQALKLNWKVW-----TPFQFININYVPVQFRVLFANLVAFFW 184          
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: UPI001CF38B90 (peroxisomal membrane protein 2 n=2 Tax=Bufo TaxID=8383 RepID=UPI001CF38B90)

HSP 1 Score: 77.8 bits (190), Expect = 1.980e-13
Identity = 58/183 (31.69%), Postives = 91/183 (49.73%), Query Frame = 0
Query:  118 LLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDY--AALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLW-TFVA 297
            LL  Y   L  RP++ K VTSA++ ALG+++SQ +    +    N        L   L  A  G   + PL H  Y  L+ W+P+    A  L ++L+D +++ P F LLF +    LEG++  + + RT+ D Y  A  + W V       P Q    N  PV++RVL ++ +   W T++A
Sbjct:   20 LLRTYLQLLHSRPILTKAVTSAILSALGNLLSQRIERRHQSKSKNV------DLVAPLRFAAYGLFFTGPLSHYFYMFLEHWIPSSVPLA-GLRRLLLDRIIIAPGFLLLFFIVMNFLEGKNL-KSLNRTLNDSYWSALKMNWKVW-----TPFQFINVNYVPVQFRVLFANLVAFFWYTYLA 189          
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: W5M8V0_LEPOC (Peroxisomal membrane protein 2 n=3 Tax=Lepisosteidae TaxID=7915 RepID=W5M8V0_LEPOC)

HSP 1 Score: 77.4 bits (189), Expect = 2.890e-13
Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = 0
Query:  114 WFENLLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNA-LRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYA-LAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFN--QEIIRTIEDDYAALVF-WLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLW 293
            +++ LL  Y + L++ P++ K VTS ++ ALG+++SQ +    R GR  A        L      A+ G CV+ P+ H  Y  L+  LP   S  Y  L ++L+D LV  P F LLF +   +LEG++++  QE +RT    ++AL   W V       P Q    N  PV++RVL ++ + + W
Sbjct:   15 FYQRLLQHYLNLLKKYPILTKSVTSGILSALGNLLSQALE---RRGRDKAGKSGKELDLLGPARFAVYGLCVTGPVSHYFYQLLELLLPT--SIPYCMLKRLLLDRLVFSPAFLLLFFLVMNMLEGKNWSAFQEKLRT--GYWSALKMNWKVW-----TPFQFVNINYVPVQFRVLFANLVALFW 187          
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: UPI0010A552F0 (peroxisomal membrane protein 2-like n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=UPI0010A552F0)

HSP 1 Score: 76.6 bits (187), Expect = 4.310e-13
Identity = 55/177 (31.07%), Postives = 92/177 (51.98%), Query Frame = 0
Query:  117 NLLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLW 293
             LL +Y   L + P++ K +TS ++ ALG+V+SQ +    R  +A++     +AL   L  A  G C++ P  H  Y  L+  LPA +   + + ++L+D L+  P+  LLF +   +LEGR + Q+  + +  DY A    L +      P Q    N  PV++RVL S+ + + W
Sbjct:    6 RLLQQYLRLLHKYPIMTKSITSGVLSALGNVLSQALEGR-RSVQASSPVKSLDALGP-LRFAGYGLCITGPCSHHFYQMLEVLLPASQPH-FMVKRLLLDRLLYAPLLLLLFFLVMNVLEGRRW-QDFAQKVRRDYLAA---LTMNWKVWTPFQFVNINYVPVQFRVLFSNVVALFW 175          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMD8_ECTSI3.730e-19291.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LMD9_ECTSI5.950e-4646.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2D0_ECTSI2.050e-3847.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0GF40_9STRA2.250e-1428.15Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
UPI001B7EE91C3.880e-1429.83peroxisomal membrane protein 2-like n=4 Tax=Acipen... [more]
V4C7Q2_LOTGI1.900e-1326.88Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
A0A7D9NK33_XENTR1.980e-1331.46Peroxisomal membrane protein 2 n=4 Tax=Xenopus Tax... [more]
UPI001CF38B901.980e-1331.69peroxisomal membrane protein 2 n=2 Tax=Bufo TaxID=... [more]
W5M8V0_LEPOC2.890e-1332.97Peroxisomal membrane protein 2 n=3 Tax=Lepisosteid... [more]
UPI0010A552F04.310e-1331.07peroxisomal membrane protein 2-like n=1 Tax=Dentic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 233..298
e-value: 1.8E-9
score: 37.7
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 114..295
NoneNo IPR availablePANTHERPTHR11266:SF80PEROXISOMAL MEMBRANE PROTEIN 2coord: 114..295
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..196
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 252..272
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 233..251
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 197..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..232
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 284..304
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 273..283
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 157..175
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 305..318
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..156
NoneNo IPR availableTMHMMTMhelixcoord: 209..231
NoneNo IPR availableTMHMMTMhelixcoord: 252..274
NoneNo IPR availableTMHMMTMhelixcoord: 175..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7554contigEcto-sp13_S_contig7554:4137..6088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7554.18748.1mRNA_Ecto-sp13_S_contig7554.18748.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7554 4137..6088 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7554.18748.1 ID=prot_Ecto-sp13_S_contig7554.18748.1|Name=mRNA_Ecto-sp13_S_contig7554.18748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=319bp
SPRVARRRLFPDKGAPRRVLIEKIRLDEAEELIRRDKMLFKDEHELTSMA
VDPHGTKPFPDCRASRSNDASNGTLPEHQTPKYVKCPTPDTNGPGATSIV
FEGQRGGRCCPCLWFENLLGRYADELERRPLIWKCVTSALVGALGDVISQ
GVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWL
PAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIED
DYAALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLWTFVACFV
IGPLEPRRDSRPGTWGED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22