mRNA_Ecto-sp13_S_contig7554.18748.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: D8LMD8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD8_ECTSI) HSP 1 Score: 538 bits (1385), Expect = 3.730e-192 Identity = 256/281 (91.10%), Postives = 265/281 (94.31%), Query Frame = 1
Query: 112 MLFKDEHELTSMAVDPHGTKPFPDCRASRSNDASNGTLPEHQTPKYVKCPTPDTNGPGATSIVFEGQRGGRCCPCLWFENLLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLWTFVACFVIGPLEPRRDSRPGTWGED 954
MLFKDE E SMAV P TKPFPDCRASRSN ASNG LP+HQTPKYVKCPT DTNGPG TSIVFEGQRGG CCPCLWFE LLGRYA+ELE+RPLIWKC TSALVGALGDVISQGVYWAIRGGRANAVWHDTNA+RQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEES+AYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSF+QEIIRTIEDDY LVFWLVVIGLALAPLQVYTFNR+PVKWRVLISDG+DVLWTFVACFVIGPLEPRRDS PGTWGE+
Sbjct: 1 MLFKDEQEPRSMAVVPPNTKPFPDCRASRSNAASNGKLPQHQTPKYVKCPTSDTNGPGVTSIVFEGQRGGGCCPCLWFEKLLGRYAEELEKRPLIWKCATSALVGALGDVISQGVYWAIRGGRANAVWHDTNAVRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESKAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFSQEIIRTIEDDYVTLVFWLVVIGLALAPLQVYTFNRFPVKWRVLISDGMDVLWTFVACFVIGPLEPRRDSSPGTWGEE 281
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: D8LMD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD9_ECTSI) HSP 1 Score: 163 bits (412), Expect = 5.950e-46 Identity = 82/175 (46.86%), Postives = 116/175 (66.29%), Query Frame = 1
Query: 367 ADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLWTFVA 891
A L+ P++ K ++S +G LGDV++Q V + G A W T + +S AV IDG ++ PLLH AY L+ +PA +S A+ QV VDVLV+DP+F +F+ +TGL+EGRS EI+ TI Y LV WL+VIG+ AP+Q+Y FNRYPV++RVL +D ID++WT V+
Sbjct: 7 ASALDAYPVLTKSISSGFIGLLGDVLAQWVEYLF--GAAFPPWKTTAMVWRSCAVMIDGLLINGPLLHYAYEMLESRMPAGDSILAAMTQVCVDVLVIDPVFAFMFVWSTGLIEGRSVRGEILPTIVHHYPTLVLWLIVIGVGWAPIQIYLFNRYPVQYRVLTADLIDLVWTCVS 179
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: D7G2D0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D0_ECTSI) HSP 1 Score: 142 bits (357), Expect = 2.050e-38 Identity = 63/132 (47.73%), Postives = 94/132 (71.21%), Query Frame = 1
Query: 508 ALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLWTFVACFVI 903
A+ ++ AVAI F AP LH+ Y AL++W+PA++S+A A+AQV +D LV++ GL F+V G LEG ++ ++I+ TI+ DY LV WL+V + + P QVY F +P+KWRVLI+DG +LW F+ACF++
Sbjct: 3 AVWETWAVAIYCFFFVAPFLHVVYDALEKWIPADKSQANAIAQVTIDSLVVETFLGLTFIVMVGFLEGETWEEDIVPTIKSDYLTLVVWLMVTNMVMGPAQVYLFVHFPLKWRVLIADGKGLLWNFIACFIV 134
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: A0A7S0GF40_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GF40_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 2.250e-14 Identity = 38/135 (28.15%), Postives = 73/135 (54.07%), Query Frame = 1
Query: 511 LRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESE-----AYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLWTFVACFV 900
LR++ + +DGF +S P++H AY + +P E+ A A+ + D+ VLD F MV++GL+EG F ++I+ + DY + + + L+P + + F P+++R ++ + D++W V F+
Sbjct: 16 LRRAFGMFLDGFVISGPIMHAAYDYFEHIIPTTENNLISPSAAAMLHMFGDIFVLDAFFVASDMVSSGLMEGYGFYEDIVPQLRSDYFTSYKTSIAMSIGLSPFEFFCFRFLPLRFRSIMMNFTDIIWCSVMSFM 150
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: UPI001B7EE91C (peroxisomal membrane protein 2-like n=4 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7EE91C) HSP 1 Score: 79.7 bits (195), Expect = 3.880e-14 Identity = 54/181 (29.83%), Postives = 92/181 (50.83%), Query Frame = 1
Query: 340 WFENLLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVF-WLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLW 879
+++ LL +Y L++ P++ K VTS ++ ALG+++SQG+ +G R A+ G CV+ P+ H Y L+ ++P+ S L ++L+D LV P F L+F + LEG+S+ R + ++AL W V P Q N PV++RVL ++ + + W
Sbjct: 13 FYQRLLQQYLLLLKKYPILTKSVTSGILSALGNLLSQGLQRRGKGSNLGKGLEWGGPAR----FAVYGLCVTGPVSHYFYQCLELFVPSSASHCI-LKRLLLDRLVFSPAFLLVFFLAMNFLEGKSWAAFQKRVKTEYWSALKMNWKVW-----TPFQFININYVPVQFRVLFANLVALFW 183
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: V4C7Q2_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4C7Q2_LOTGI) HSP 1 Score: 77.8 bits (190), Expect = 1.900e-13 Identity = 50/186 (26.88%), Postives = 93/186 (50.00%), Query Frame = 1
Query: 343 FENLLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVFWLVVIGLALAPLQVYTFNRY------PVKWRVLISDGIDVLWT 882
FE LL Y D L+R+P++ K V+S+++ A+G+++SQ + G VW R + A + + PLLH + LD +P ++ + A+ +V+ D + P + +++ LLEG + R E V+W+++ +++TF +Y P K+RVL + + ++WT
Sbjct: 12 FEKLLREYNDLLQRKPVLTKAVSSSIISAVGNILSQ-LLAPHAGSGGKIVW------RSTFAYSCFALMFNGPLLHFFHQYLDNVVPKKKDKTSAMKRVIFDRFIFAPPYLFIYLYVIALLEGHGTSGAKQRIKE------VYWMLLQ----LNWKIWTFVQYFNLTYVPAKYRVLFGNLVSLIWT 180
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: A0A7D9NK33_XENTR (Peroxisomal membrane protein 2 n=4 Tax=Xenopus TaxID=8353 RepID=A0A7D9NK33_XENTR) HSP 1 Score: 77.8 bits (190), Expect = 1.980e-13 Identity = 56/178 (31.46%), Postives = 91/178 (51.12%), Query Frame = 1
Query: 352 LLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDY--AALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLW 879
LL RY L RP++ K +TSA++ ALG+++SQ I+ R LR L A+ G + PL H Y L++ +P+ A L ++L++ L++ P F LLF + LLEG++F + + + ++ Y A + W V P Q N PV++RVL ++ + W
Sbjct: 18 LLLRYLQLLHSRPVLTKALTSAILSALGNILSQ----TIQKWRKEQKHPQNVDLRGPLRFAVYGLLFTGPLSHYFYLLLEQLVPSSAPLA-GLQRLLIERLIIAPAFLLLFFLVMNLLEGKNFTK-LNQKLKSSYWQALKLNWKVW-----TPFQFININYVPVQFRVLFANLVAFFW 184
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: UPI001CF38B90 (peroxisomal membrane protein 2 n=2 Tax=Bufo TaxID=8383 RepID=UPI001CF38B90) HSP 1 Score: 77.8 bits (190), Expect = 1.980e-13 Identity = 58/183 (31.69%), Postives = 91/183 (49.73%), Query Frame = 1
Query: 352 LLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDY--AALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLW-TFVA 891
LL Y L RP++ K VTSA++ ALG+++SQ + + N L L A G + PL H Y L+ W+P+ A L ++L+D +++ P F LLF + LEG++ + + RT+ D Y A + W V P Q N PV++RVL ++ + W T++A
Sbjct: 20 LLRTYLQLLHSRPILTKAVTSAILSALGNLLSQRIERRHQSKSKNV------DLVAPLRFAAYGLFFTGPLSHYFYMFLEHWIPSSVPLA-GLRRLLLDRIIIAPGFLLLFFIVMNFLEGKNL-KSLNRTLNDSYWSALKMNWKVW-----TPFQFINVNYVPVQFRVLFANLVAFFWYTYLA 189
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: W5M8V0_LEPOC (Peroxisomal membrane protein 2 n=3 Tax=Lepisosteidae TaxID=7915 RepID=W5M8V0_LEPOC) HSP 1 Score: 77.4 bits (189), Expect = 2.890e-13 Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = 1
Query: 340 WFENLLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNA-LRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYA-LAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFN--QEIIRTIEDDYAALVF-WLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLW 879
+++ LL Y + L++ P++ K VTS ++ ALG+++SQ + R GR A L A+ G CV+ P+ H Y L+ LP S Y L ++L+D LV P F LLF + +LEG++++ QE +RT ++AL W V P Q N PV++RVL ++ + + W
Sbjct: 15 FYQRLLQHYLNLLKKYPILTKSVTSGILSALGNLLSQALE---RRGRDKAGKSGKELDLLGPARFAVYGLCVTGPVSHYFYQLLELLLPT--SIPYCMLKRLLLDRLVFSPAFLLLFFLVMNMLEGKNWSAFQEKLRT--GYWSALKMNWKVW-----TPFQFVNINYVPVQFRVLFANLVALFW 187
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Match: UPI0010A552F0 (peroxisomal membrane protein 2-like n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=UPI0010A552F0) HSP 1 Score: 76.6 bits (187), Expect = 4.310e-13 Identity = 55/177 (31.07%), Postives = 92/177 (51.98%), Query Frame = 1
Query: 349 NLLGRYADELERRPLIWKCVTSALVGALGDVISQGVYWAIRGGRANAVWHDTNALRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESEAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFNQEIIRTIEDDYAALVFWLVVIGLALAPLQVYTFNRYPVKWRVLISDGIDVLW 879
LL +Y L + P++ K +TS ++ ALG+V+SQ + R +A++ +AL L A G C++ P H Y L+ LPA + + + ++L+D L+ P+ LLF + +LEGR + Q+ + + DY A L + P Q N PV++RVL S+ + + W
Sbjct: 6 RLLQQYLRLLHKYPIMTKSITSGVLSALGNVLSQALEGR-RSVQASSPVKSLDALGP-LRFAGYGLCITGPCSHHFYQMLEVLLPASQPH-FMVKRLLLDRLLYAPLLLLLFFLVMNVLEGRRW-QDFAQKVRRDYLAA---LTMNWKVWTPFQFVNINYVPVQFRVLFSNVVALFW 175 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7554.18748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7554.18748.1 >prot_Ecto-sp13_S_contig7554.18748.1 ID=prot_Ecto-sp13_S_contig7554.18748.1|Name=mRNA_Ecto-sp13_S_contig7554.18748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=319bp SPRVARRRLFPDKGAPRRVLIEKIRLDEAEELIRRDKMLFKDEHELTSMAback to top mRNA from alignment at Ecto-sp13_S_contig7554:4137..6088+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7554.18748.1 ID=mRNA_Ecto-sp13_S_contig7554.18748.1|Name=mRNA_Ecto-sp13_S_contig7554.18748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1952bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7554:4137..6088+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7554:4137..6088+ >mRNA_Ecto-sp13_S_contig7554.18748.1 ID=mRNA_Ecto-sp13_S_contig7554.18748.1|Name=mRNA_Ecto-sp13_S_contig7554.18748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=957bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7554:4137..6088+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |