prot_Ecto-sp13_S_contig75503.18741.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig75503.18741.1
Unique Nameprot_Ecto-sp13_S_contig75503.18741.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length86
Homology
BLAST of mRNA_Ecto-sp13_S_contig75503.18741.1 vs. uniprot
Match: D8LFS3_ECTSI (Cytochrome c oxidase subunit Vb n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS3_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 2.660e-58
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
Query:    1 GGIPDTHDTGRQKTEREGVGFNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLVPL 85
            GGIPDTHDTGRQKTEREGVGFNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLVPL
Sbjct:   48 GGIPDTHDTGRQKTEREGVGFNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLVPL 132          
BLAST of mRNA_Ecto-sp13_S_contig75503.18741.1 vs. uniprot
Match: A0A6U3QRH7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3QRH7_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 9.950e-23
Identity = 48/83 (57.83%), Postives = 56/83 (67.47%), Query Frame = 0
Query:    7 HDTGR--QKTEREGVG---FNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLVP 84
            H  GR  Q+ E E +G   FNRDPI PP G+GTK  P +VPS + ERVVGFE P  H + WF + AGKLHYV  ID+YF LVP
Sbjct:   45 HQGGRRLQEIEDEKLGLVTFNRDPIMPPVGAGTKENPIQVPSGYDERVVGFEDPTVHQLQWFTMTAGKLHYVSSIDKYFTLVP 127          
BLAST of mRNA_Ecto-sp13_S_contig75503.18741.1 vs. uniprot
Match: A0A7S1XX62_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX62_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.860e-19
Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    3 IPDTHDT--GRQKTEREG-----VGFNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 82
            IPD  D   GR+K E +      + FNRDPI PP G+GTK  P  VPSE +ERVVGFE P++H + WF L A   +Y+E +D+YFKL
Sbjct:   37 IPDIEDQVFGRRKMELDAEKSGDLLFNRDPIVPPVGAGTKENPILVPSEFKERVVGFEDPDTHQIAWFCLQADATYYIESVDKYFKL 123          
BLAST of mRNA_Ecto-sp13_S_contig75503.18741.1 vs. uniprot
Match: A0A835ZBD2_9STRA (Cytochrome c oxidase subunit VB n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD2_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 4.190e-19
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    9 TGRQKTEREGVGFNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 82
            TG++  E  G  FN   + PP GSGT+  P EVPS    R VG+E PE+HA+YWF L AGK+H+V  ID YFKL
Sbjct:   52 TGQRGEEVRGTFFNDQALMPPAGSGTREKPIEVPSRLDMRTVGYEDPETHAIYWFNLKAGKVHHVTPIDMYFKL 125          
BLAST of mRNA_Ecto-sp13_S_contig75503.18741.1 vs. uniprot
Match: A0A6U1NDJ1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NDJ1_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.020e-16
Identity = 39/72 (54.17%), Postives = 48/72 (66.67%), Query Frame = 0
Query:   12 QKTEREGVGFNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLV 83
            Q+ ++E V + RDP+ P  G GT A P  VPS  +ER VGFE P SH M WF L  G +H+VEEID YFKL+
Sbjct:   53 QEAKKE-VAYVRDPVIPEPGQGTLANPILVPSAMKERAVGFEDPLSHQMQWFVLQEGDIHWVEEIDMYFKLI 123          
BLAST of mRNA_Ecto-sp13_S_contig75503.18741.1 vs. uniprot
Match: A0A4D9DB47_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB47_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 2.500e-12
Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   21 FNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 82
            FNRDP+      GTK+ P  VPS   ER+VG+E P  H ++WF L  G L YV +ID+YF L
Sbjct:   93 FNRDPVFALPDQGTKSNPVLVPSGENERIVGYEDPHVHQVFWFKLRKGDLVYVPKIDKYFSL 154          
BLAST of mRNA_Ecto-sp13_S_contig75503.18741.1 vs. uniprot
Match: W7TKL4_9STRA (Cytochrome c oxidase subunit vb n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKL4_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.180e-11
Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   21 FNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 82
            FNRDP+      GTK+ P  VPS   ER+VG+E P  H ++WF L  G L YV +ID+YF L
Sbjct:  195 FNRDPVFALPDQGTKSNPVLVPSGENERIVGYEDPHVHQVFWFKLRKGDLVYVPKIDKYFSL 256          
BLAST of mRNA_Ecto-sp13_S_contig75503.18741.1 vs. uniprot
Match: A0A024FVF4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FVF4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.010e-10
Identity = 37/88 (42.05%), Postives = 51/88 (57.95%), Query Frame = 0
Query:    3 IPDTHD--TGRQKTEREG-----VGFNRDPIHPPKGSG-TKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 82
            IPD +D   GRQ+ E E      + FNRDPI   +  G +K  P  VPS +  R +G  H +S  ++WF L  GK+ YV +I++YFKL
Sbjct:   27 IPDIYDHAVGRQREELEDEKAGIITFNRDPIETDETQGNSKEDPILVPSFNDVRPIGVSHNDSSYVFWFNLQKGKIFYVPQIEKYFKL 114          
BLAST of mRNA_Ecto-sp13_S_contig75503.18741.1 vs. uniprot
Match: A0A1E7FE28_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE28_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 8.990e-10
Identity = 29/85 (34.12%), Postives = 52/85 (61.18%), Query Frame = 0
Query:    2 GIPDTHDTGRQKTEREGVGFNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAA-GKLHYVEEIDRYFKLVPL 85
            GI D  +  ++  E    G+N   + PP+G+GT   P  +PS    RVVG++ P+SHAM+WF + +    +Y++++  +FK++P+
Sbjct:   92 GIEDLDELEQKNIE----GYNDLGLVPPEGTGTFTSPILIPSRRTSRVVGYQDPDSHAMFWFTIHSDNSSYYIKDLGLFFKMLPI 172          
BLAST of mRNA_Ecto-sp13_S_contig75503.18741.1 vs. uniprot
Match: A0A485KGU5_9STRA (Aste57867_13701 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGU5_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.450e-9
Identity = 35/79 (44.30%), Postives = 46/79 (58.23%), Query Frame = 0
Query:   10 GRQKTE----REGVG-FNRDPIHPPKGSG-TKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKL 82
            GRQ  E     EG+  FNRDP+   +  G +K  P  VPS + +R VG  H +S  + WF L  GK+HYV + D+YFKL
Sbjct:   34 GRQGEELHLAEEGIELFNRDPVSSEEHQGNSKDDPILVPSFNSQRAVGISHNDSPYIVWFNLDEGKVHYVPQFDKYFKL 112          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig75503.18741.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LFS3_ECTSI2.660e-58100.00Cytochrome c oxidase subunit Vb n=2 Tax=Ectocarpus... [more]
A0A6U3QRH7_9STRA9.950e-2357.83Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1XX62_9STRA1.860e-1951.72Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835ZBD2_9STRA4.190e-1954.05Cytochrome c oxidase subunit VB n=1 Tax=Tribonema ... [more]
A0A6U1NDJ1_9STRA1.020e-1654.17Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A4D9DB47_9STRA2.500e-1250.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TKL4_9STRA1.180e-1150.00Cytochrome c oxidase subunit vb n=1 Tax=Nannochlor... [more]
A0A024FVF4_9STRA1.010e-1042.05Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A1E7FE28_9STRA8.990e-1034.12Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A485KGU5_9STRA2.450e-944.30Aste57867_13701 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036972Cytochrome c oxidase, subunit Vb superfamilyGENE3D2.60.11.10coord: 1..85
e-value: 2.1E-9
score: 39.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig75503contigEcto-sp13_S_contig75503:303..560 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig75503.18741.1mRNA_Ecto-sp13_S_contig75503.18741.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig75503 303..560 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig75503.18741.1 ID=prot_Ecto-sp13_S_contig75503.18741.1|Name=mRNA_Ecto-sp13_S_contig75503.18741.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
GGIPDTHDTGRQKTEREGVGFNRDPIHPPKGSGTKAMPFEVPSEHQERVV
GFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLVPL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036972Cyt_c_oxidase_su5b_sf