prot_Ecto-sp13_S_contig7547.18736.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7547.18736.1
Unique Nameprot_Ecto-sp13_S_contig7547.18736.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length261
Homology
BLAST of mRNA_Ecto-sp13_S_contig7547.18736.1 vs. uniprot
Match: D8LHA7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA7_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 5.220e-139
Identity = 203/226 (89.82%), Postives = 211/226 (93.36%), Query Frame = 0
Query:   36 IVQDRRFKKGLDQAVKDGHKQQAETFQADVEAGRAPTVADPDDSLFVTYPLMRLTFYLYEPPAKAMFKVVGPLFLVLYLMLMNFNEFYGLRNIWDDGCPGEERDSDYLANGIGIAITAAFVVPAIRADRMKSPYISFTRDDLMAVAFLLGLALSTSPYCRWVISGCFVSFLVVVSAVVASVRHYFKCLHLKKTAAQHPAVMVE-ASKEVKAAGSEFKMSEWFHASV 260
            IVQDRRFKK L+QAVKDGHKQQAET+QADVEAG  PTVADPDD+LFVTYPLMRLTFYLYEPPAKAMFK+VGPLFLV+YLMLMNFNEFYGLRNIWDDGCPGEERDSDYLANGIGIAITAAFVVPAIRADRMKSPYISFTRDDLMAVAFL+GLALSTSPYC W ISGCFVSFLVVVSAVVASVRHYFKC HL+KT  Q P V VE +SKEVKA  SEF MSEWFHASV
Sbjct:  203 IVQDRRFKKNLEQAVKDGHKQQAETYQADVEAGLPPTVADPDDNLFVTYPLMRLTFYLYEPPAKAMFKIVGPLFLVMYLMLMNFNEFYGLRNIWDDGCPGEERDSDYLANGIGIAITAAFVVPAIRADRMKSPYISFTRDDLMAVAFLIGLALSTSPYCHWAISGCFVSFLVVVSAVVASVRHYFKCKHLRKTVKQRPPVTVEVSSKEVKATSSEFNMSEWFHASV 428          
BLAST of mRNA_Ecto-sp13_S_contig7547.18736.1 vs. uniprot
Match: A0A6H5JJB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJB2_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 5.380e-122
Identity = 181/207 (87.44%), Postives = 190/207 (91.79%), Query Frame = 0
Query:   40 RRFKKGLDQAVKDGHKQQAETFQADVEAGRAPTVADPDDSLFVTYPLMRLTFYLYEPPAKAMFKVVGPLFLVLYLMLMNFNEFYGLRNIWDDGCPGEERDSDYLANGIGIAITAAFVVPAIRADRMKSPYISFTRDDLMAVAFLLGLALSTSPYCRWVISGCFVSFLVVVSAVVASVRHYFKCLHLKKTAAQHPAVMVEASK-EVKA 245
            +RFKKGL+QAV DGHKQQAET+QADVEA RAPTVADPDD +FVTYPLMRLTFYLYEPPAKAM+K+VGPLFLVLYLMLMNFNEFYGLRNIWDDGCP  +RDSDYLANGIGIAITAAFVVPAIRADRMKSPYISFTRDDL AV FLLGLALSTS YC W ISGCFVSFLVVVSAVVASVRHYFKC H++KT  Q P VMVEAS  EVKA
Sbjct:  125 QRFKKGLEQAVMDGHKQQAETYQADVEASRAPTVADPDDDVFVTYPLMRLTFYLYEPPAKAMYKIVGPLFLVLYLMLMNFNEFYGLRNIWDDGCPRGKRDSDYLANGIGIAITAAFVVPAIRADRMKSPYISFTRDDLTAVTFLLGLALSTSSYCHWAISGCFVSFLVVVSAVVASVRHYFKCKHMRKTVEQRPPVMVEASSTEVKA 331          
BLAST of mRNA_Ecto-sp13_S_contig7547.18736.1 vs. uniprot
Match: D8LHA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA5_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 5.170e-60
Identity = 121/229 (52.84%), Postives = 146/229 (63.76%), Query Frame = 0
Query:   35 EIVQDRRFKKGLDQAVKDGHKQQAETFQADVEAGRAPTVADPDDSLFVTYPLMRLTFYLYEPPAKAMFKVVGPLFLVLYLMLMNFNEFYGLRNIWDDGCPGEERDSDYLANGIGIAITAAFVVP--AIRADRMKSPYIS-FTRDDLMAVAFLLGLALSTSPYCRWVISGCFVSFLVVVSAVVASVRHYFKCLHLKKTAAQHPAVMVEASKEVKAAGSEFKMSEWFHASV 260
            ++VQD R KKGL Q VKDGH QQ ET+QADVEAGRAP VA+PD++LFV+ P MRL FYLYEP    +FK+  PL LVL LMLMNF+E YG  +     CP EERD  YLAN IGI ITAAFV+P  A R + +KSP I  F+ ++LM   FL GLAL+T   C  V  G  ++  V VS V  ++   + C  LKK  A     +VEASK V    S F +  W  ASV
Sbjct:   34 QLVQDTRLKKGLTQDVKDGHNQQLETYQADVEAGRAPRVANPDENLFVSCPRMRLIFYLYEPVLNVLFKIGVPLILVLVLMLMNFHENYGPLDDTLGTCPSEERDPGYLANAIGIVITAAFVIPELACRKELVKSPNIRCFSVNELMPALFLAGLALATVRKCLVVSLGILLNCWVPVSMVFGALLQLYTCRKLKKETATSVPQVVEASKNV----SNFDIDRWRRASV 258          
BLAST of mRNA_Ecto-sp13_S_contig7547.18736.1 vs. uniprot
Match: D7FKB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB9_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 1.750e-38
Identity = 88/195 (45.13%), Postives = 118/195 (60.51%), Query Frame = 0
Query:   69 RAPTVADPDDSLFVTYPLMRLTFYLYEPPAKAMFKVVGPLFLVLYLMLMNFNEFYGLRN-IWDDGC---PGEERDSDYLANGIGIAITAAFVVPAIRADRMKSPYISFTRDDLMAVAFLLGLALSTSPYCRWVISGCFVSFLVVVSAVVASVRHYFKCLHLKKTAAQHPA----VMVEASKEVKAAGSEFKMSEW 255
            RA   A  D++L + YP + L F+LYEP +KA+FK++GPL LVL LMLMNF EF+G    +  + C   P  +   DYLANGIGI + A F +P+IR   +KSP ISF RDD MAVAFL+GLALS +  CR  + G  +S +VVV A+++ V   F+   L+K A + P     V  +  K+ K    EF    W
Sbjct:  255 RADDEAGLDNNLLIRYPQLTLRFWLYEPISKAVFKILGPLALVLALMLMNFQEFFGFSAAVQSNDCLEQPASDTYRDYLANGIGIVLAAFFAIPSIREGNIKSPGISFKRDDFMAVAFLIGLALSNARQCRVALVGILLSCVVVVWALISFVWFMFELRGLRKRAEREPLRVNKVTKDKKKKAKPRAVEFDKKWW 449          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7547.18736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LHA7_ECTSI5.220e-13989.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJB2_9PHAE5.380e-12287.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHA5_ECTSI5.170e-6052.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FKB9_ECTSI1.750e-3845.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 191..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..216
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 161..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 217..260
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..160
NoneNo IPR availableTMHMMTMhelixcoord: 194..216
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 143..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7547contigEcto-sp13_S_contig7547:1635..4056 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7547.18736.1mRNA_Ecto-sp13_S_contig7547.18736.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7547 951..7428 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7547.18736.1 ID=prot_Ecto-sp13_S_contig7547.18736.1|Name=mRNA_Ecto-sp13_S_contig7547.18736.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=261bp
MAPRFEFKTNQSATRWHFSVLLHTVISEYSATSSEIVQDRRFKKGLDQAV
KDGHKQQAETFQADVEAGRAPTVADPDDSLFVTYPLMRLTFYLYEPPAKA
MFKVVGPLFLVLYLMLMNFNEFYGLRNIWDDGCPGEERDSDYLANGIGIA
ITAAFVVPAIRADRMKSPYISFTRDDLMAVAFLLGLALSTSPYCRWVISG
CFVSFLVVVSAVVASVRHYFKCLHLKKTAAQHPAVMVEASKEVKAAGSEF
KMSEWFHASV*
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